RNA–Protein interactions for RNA: ENSMUST00000187727.1

Gm28578-201, mousemouse

TSL 1 (best) BASIC

Gene Gm28578, Length 2,698 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28578-201ENSMUST00000187727 Gm17416Q30KP4 66 aa6.36□□□□□ -1.39
Gm28578-201ENSMUST00000187727 H2al1bA0A087WP11 105 aa6.33□□□□□ -1.4
Gm28578-201ENSMUST00000187727 Mycbp2Q7TPH6 4711 aa6.31□□□□□ -1.4
Gm28578-201ENSMUST00000187727 Gm10337F7DEP7 55 aa6.28□□□□□ -1.4
Gm28578-201ENSMUST00000187727 Gm38119A0A0A6YX29 146 aa6.27□□□□□ -1.41
Gm28578-201ENSMUST00000187727 H2al1kJ3QP08 105 aa6.26□□□□□ -1.41
Gm28578-201ENSMUST00000187727 H2al1mQ9DAD9 105 aa6.26□□□□□ -1.41
Gm28578-201ENSMUST00000187727 Cox6b2Q80ZN9 88 aa6.25□□□□□ -1.41
Gm28578-201ENSMUST00000187727 Sec61bQ9CQS8 96 aaKnown RBP6.23□□□□□ -1.41
Gm28578-201ENSMUST00000187727 Defb1P56386 69 aa6.21□□□□□ -1.42
Gm28578-201ENSMUST00000187727 4933415A04RikQ9D443 101 aa6.18□□□□□ -1.42
Gm28578-201ENSMUST00000187727 2210017I01RikA0A0A6YVV1 95 aa6.14□□□□□ -1.43
Gm28578-201ENSMUST00000187727 HydinQ80W93 5154 aa6.13□□□□□ -1.43
Gm28578-201ENSMUST00000187727 A030003K21RikA0A1Y7VIM3 128 aa6.08□□□□□ -1.44
Gm28578-201ENSMUST00000187727 Gm17606F6ZL36 78 aa6.08□□□□□ -1.44
Gm28578-201ENSMUST00000187727 Lce1dQ9D731 133 aa6.08□□□□□ -1.44
Gm28578-201ENSMUST00000187727 Lrp2A2ARV4 4660 aa6.07□□□□□ -1.44
Gm28578-201ENSMUST00000187727 Gm19668J3QMD1 248 aa6.05□□□□□ -1.44
Gm28578-201ENSMUST00000187727 Krtap3-1A2A591 98 aa6.02□□□□□ -1.44
Gm28578-201ENSMUST00000187727 Prm2P07978 107 aa6.01□□□□□ -1.45
Gm28578-201ENSMUST00000187727 2310057N15RikQ9D6T8 200 aa5.96□□□□□ -1.46
Gm28578-201ENSMUST00000187727 Fam229aB2KGE5 128 aa5.95□□□□□ -1.46
Gm28578-201ENSMUST00000187727 Krtap13-1Q8K198 168 aa5.95□□□□□ -1.46
Gm28578-201ENSMUST00000187727 Gm9955Q8CEJ8 102 aa5.94□□□□□ -1.46
Gm28578-201ENSMUST00000187727 Gm20537G3UYK7 97 aa5.93□□□□□ -1.46
Gm28578-201ENSMUST00000187727 Lce1a1Q9CQH5 143 aa5.93□□□□□ -1.46
Gm28578-201ENSMUST00000187727 Lce1gQ9D195 139 aa5.93□□□□□ -1.46
Gm28578-201ENSMUST00000187727 Krtap1-5A2A590 122 aa5.93□□□□□ -1.46
Gm28578-201ENSMUST00000187727 Gm10382Q3V0T5 144 aa5.92□□□□□ -1.46
Gm28578-201ENSMUST00000187727 PcloQ9QYX7 5068 aa5.9□□□□□ -1.46
Gm28578-201ENSMUST00000187727 Gm3646F6S692 53 aa5.89□□□□□ -1.47
Gm28578-201ENSMUST00000187727 Krtap16-3Q8C1I6 86 aa5.86□□□□□ -1.47
Gm28578-201ENSMUST00000187727 Prm1P02319 51 aa5.84□□□□□ -1.47
Gm28578-201ENSMUST00000187727 Krtap19-1Q925H2 87 aa5.84□□□□□ -1.47
Gm28578-201ENSMUST00000187727 BC029722A0A0N4SW31 51 aa5.83□□□□□ -1.48
Gm28578-201ENSMUST00000187727 Gm9789Q8BIG3 52 aa5.82□□□□□ -1.48
Gm28578-201ENSMUST00000187727 Gm6217A0A1Y7VJK9 128 aa5.81□□□□□ -1.48
Gm28578-201ENSMUST00000187727 Krtap19-3Q925H6 87 aa5.79□□□□□ -1.48
Gm28578-201ENSMUST00000187727 Gm18596A0A1W2P860 280 aa5.78□□□□□ -1.48
Gm28578-201ENSMUST00000187727 Ndufs5Q99LY9 106 aa5.78□□□□□ -1.48
Gm28578-201ENSMUST00000187727 Herc1E9PZP8 4859 aa5.78□□□□□ -1.48
Gm28578-201ENSMUST00000187727 Pla2g10Q9QXX3 151 aa5.77□□□□□ -1.49
Gm28578-201ENSMUST00000187727 Gm7735D3YX18 52 aa5.75□□□□□ -1.49
Gm28578-201ENSMUST00000187727 Gm17402F6Z0L5 76 aa5.73□□□□□ -1.49
Gm28578-201ENSMUST00000187727 Krtap1-3A2A588 173 aa5.69□□□□□ -1.5
Gm28578-201ENSMUST00000187727 1700042G07RikB1AUF7 90 aa5.68□□□□□ -1.5
Gm28578-201ENSMUST00000187727 Ush2AQ2QI47 5193 aa5.67□□□□□ -1.5
Gm28578-201ENSMUST00000187727 Hmcn2A2AJ76 5100 aa5.66□□□□□ -1.5
Gm28578-201ENSMUST00000187727 Gm19426M0QWC7 77 aa5.65□□□□□ -1.51
Gm28578-201ENSMUST00000187727 Krtap1-4Q3V2D6 188 aa5.65□□□□□ -1.51
Gm28578-201ENSMUST00000187727 Crct1Q6PAI5 102 aa5.65□□□□□ -1.51
Gm28578-201ENSMUST00000187727 CriptO70333 101 aa5.63□□□□□ -1.51
Gm28578-201ENSMUST00000187727 Gm3880A0A1B0GSB3 72 aa5.59□□□□□ -1.51
Gm28578-201ENSMUST00000187727 B930094E09RikQ8C4T2 136 aa5.57□□□□□ -1.52
Gm28578-201ENSMUST00000187727 Gm10318A0A1W2P728 225 aa5.51□□□□□ -1.53
Gm28578-201ENSMUST00000187727 4932415D10RikA0A1W2P6U8 4986 aa5.51□□□□□ -1.53
Gm28578-201ENSMUST00000187727 Sprr2a3Q4KL71 83 aa5.5□□□□□ -1.53
Gm28578-201ENSMUST00000187727 Sprr2a1Q9CQK8 83 aa5.5□□□□□ -1.53
Gm28578-201ENSMUST00000187727 Lce1lQ9D1G7 135 aa5.49□□□□□ -1.53
Gm28578-201ENSMUST00000187727 Rnf213E9Q555 5152 aaKnown RBP5.49□□□□□ -1.53
Gm28578-201ENSMUST00000187727 ZanO88799 5376 aa5.49□□□□□ -1.53
Gm28578-201ENSMUST00000187727 Gm12216A0A1W2P827 62 aa5.48□□□□□ -1.53
Gm28578-201ENSMUST00000187727 Ubr4A2AN08 5180 aa5.46□□□□□ -1.53
Gm28578-201ENSMUST00000187727 LorP18165 486 aa5.46□□□□□ -1.54
Gm28578-201ENSMUST00000187727 Spink7Q6IE32 76 aa5.46□□□□□ -1.54
Gm28578-201ENSMUST00000187727 Romo1P60603 79 aa5.45□□□□□ -1.54
Gm28578-201ENSMUST00000187727 A0A286YCP9 139 aa5.43□□□□□ -1.54
Gm28578-201ENSMUST00000187727 Fat4Q2PZL6 4981 aa5.38□□□□□ -1.55
Gm28578-201ENSMUST00000187727 Krtap12-1Q9Z287 130 aa5.35□□□□□ -1.55
Gm28578-201ENSMUST00000187727 Krtap19-9aF8WH65 55 aa5.33□□□□□ -1.56
Gm28578-201ENSMUST00000187727 SspoQ8CG65 4998 aa5.29□□□□□ -1.56
Gm28578-201ENSMUST00000187727 Lce1jD3YUU5 139 aa5.26□□□□□ -1.57
Gm28578-201ENSMUST00000187727 Gm20538F6Z9R1 75 aa5.19□□□□□ -1.58
Gm28578-201ENSMUST00000187727 Gm10061D3Z714 54 aa5.17□□□□□ -1.58
Gm28578-201ENSMUST00000187727 Krtap19-2Q925I0 141 aa5.16□□□□□ -1.58
Gm28578-201ENSMUST00000187727 Krtap31-2Q8CAY5 177 aa5.15□□□□□ -1.58
Gm28578-201ENSMUST00000187727 Camk2n1Q6QWF9 78 aa5.14□□□□□ -1.59
Gm28578-201ENSMUST00000187727 Krtap31-1Q9D644 177 aa5.12□□□□□ -1.59
Gm28578-201ENSMUST00000187727 Krtap9-5A2A5X3 358 aa5.09□□□□□ -1.6
Gm28578-201ENSMUST00000187727 Gm40193A0A1B0GT39 78 aa5.05□□□□□ -1.6
Gm28578-201ENSMUST00000187727 Mp68P56379 58 aa5.01□□□□□ -1.61
Gm28578-201ENSMUST00000187727 Lce1iQ9D6P5 149 aa4.96□□□□□ -1.62
Gm28578-201ENSMUST00000187727 Krtap17-1A2A5X6 109 aa4.94□□□□□ -1.62
Gm28578-201ENSMUST00000187727 Krtap8-1O08633 61 aa4.94□□□□□ -1.62
Gm28578-201ENSMUST00000187727 Krtap7-1Q9D3I6 87 aa4.93□□□□□ -1.62
Gm28578-201ENSMUST00000187727 Muc5bE9Q5I3 4800 aa4.9□□□□□ -1.62
Gm28578-201ENSMUST00000187727 Lce1a2Q9D1K4 149 aa4.89□□□□□ -1.63
Gm28578-201ENSMUST00000187727 Krtap19-9bQ99NG9 58 aa4.89□□□□□ -1.63
Gm28578-201ENSMUST00000187727 Gm6358A0A087WPH4 74 aa4.86□□□□□ -1.63
Gm28578-201ENSMUST00000187727 Gm11569B1AQB1 180 aa4.86□□□□□ -1.63
Gm28578-201ENSMUST00000187727 Lce1hQ9D6R3 140 aa4.78□□□□□ -1.64
Gm28578-201ENSMUST00000187727 Mt2P02798 61 aa4.76□□□□□ -1.65
Gm28578-201ENSMUST00000187727 Tnp1P10856 55 aa4.75□□□□□ -1.65
Gm28578-201ENSMUST00000187727 Gm45618A0A1B0GSA0 219 aa4.7□□□□□ -1.66
Gm28578-201ENSMUST00000187727 Krtap4-9B1AQA9 244 aa4.67□□□□□ -1.66
Gm28578-201ENSMUST00000187727 Gm9112A2AI92 75 aa4.62□□□□□ -1.67
Gm28578-201ENSMUST00000187727 Gm11562A0PK51 136 aa4.61□□□□□ -1.67
Gm28578-201ENSMUST00000187727 Gm11554B1AQB2 190 aa4.56□□□□□ -1.68
Gm28578-201ENSMUST00000187727 2310046K23RikA0A0A6YVW6 87 aa4.55□□□□□ -1.68
Gm28578-201ENSMUST00000187727 Gm2431E9Q8S1 172 aa4.54□□□□□ -1.68
Retrieved 100 of 22,080 RNA–protein pairs in 77.9 ms