RNA–Protein interactions for RNA: ENSMUST00000187727.1

Gm28578-201, mousemouse

TSL 1 (best) BASIC

Gene Gm28578, Length 2,698 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28578-201ENSMUST00000187727 Gm35339A0A140LHH9 1649 aa25.22■■□□□ 1.63
Gm28578-201ENSMUST00000187727 NischQ80TM9 1593 aa25.13■■□□□ 1.61
Gm28578-201ENSMUST00000187727 Abcc9P70170 1546 aa24.48■■□□□ 1.51
Gm28578-201ENSMUST00000187727 Abcc8B2RUS7 1588 aa24.08■■□□□ 1.45
Gm28578-201ENSMUST00000187727 ScribQ80U72 1612 aa22.64■■□□□ 1.21
Gm28578-201ENSMUST00000187727 Dcaf1Q80TR8 1506 aa22.62■■□□□ 1.21
Gm28578-201ENSMUST00000187727 Rhox8Q6VSS7 320 aa22.32■■□□□ 1.16
Gm28578-201ENSMUST00000187727 NacadQ5SWP3 1504 aa22.15■■□□□ 1.14
Gm28578-201ENSMUST00000187727 Kdm5dQ62240 1548 aa22.12■■□□□ 1.13
Gm28578-201ENSMUST00000187727 Rtl1Q7M732 1744 aa22.07■■□□□ 1.12
Gm28578-201ENSMUST00000187727 Ccdc180J3QNE4 1664 aa22.05■■□□□ 1.12
Gm28578-201ENSMUST00000187727 Rb1cc1Q9ESK9 1588 aa21.96■■□□□ 1.11
Gm28578-201ENSMUST00000187727 Baz1aO88379 1555 aa21.79■■□□□ 1.08
Gm28578-201ENSMUST00000187727 Crybg2B7ZCC2 1516 aa21.71■■□□□ 1.07
Gm28578-201ENSMUST00000187727 Sycp2Q9CUU3 1500 aa21.65■■□□□ 1.06
Gm28578-201ENSMUST00000187727 Zcchc6Q5BLK4 1491 aaKnown RBP21.27■■□□□ 1
Gm28578-201ENSMUST00000187727 Smarca2Q6DIC0 1577 aa21.24■□□□□ 0.99
Gm28578-201ENSMUST00000187727 BicraF8VPZ9 1578 aa21.13■□□□□ 0.97
Gm28578-201ENSMUST00000187727 Brd4Q9ESU6 1400 aaKnown RBP20.7■□□□□ 0.91
Gm28578-201ENSMUST00000187727 Ccdc136Q3TVA9 1136 aa20.7■□□□□ 0.9
Gm28578-201ENSMUST00000187727 Trim41Q5NCC3 630 aa20.68■□□□□ 0.9
Gm28578-201ENSMUST00000187727 Cecr2E9Q2Z1 1453 aa20.66■□□□□ 0.9
Gm28578-201ENSMUST00000187727 Smarca4Q3TKT4 1613 aaKnown RBP20.59■□□□□ 0.89
Gm28578-201ENSMUST00000187727 Pds5bQ4VA53 1446 aaKnown RBP20.48■□□□□ 0.87
Gm28578-201ENSMUST00000187727 HrcG5E8J6 738 aa20.47■□□□□ 0.87
Gm28578-201ENSMUST00000187727 CftrP26361 1476 aa20.46■□□□□ 0.87
Gm28578-201ENSMUST00000187727 Synj1Q8CHC4 1574 aa20.45■□□□□ 0.86
Gm28578-201ENSMUST00000187727 Cttnbp2B9EJA2 1648 aa20.45■□□□□ 0.86
Gm28578-201ENSMUST00000187727 Atad2bE9Q166 1460 aaKnown RBP20.45■□□□□ 0.86
Gm28578-201ENSMUST00000187727 Iqgap2Q3UQ44 1575 aa20.32■□□□□ 0.84
Gm28578-201ENSMUST00000187727 Golga3P55937 1487 aa20.25■□□□□ 0.83
Gm28578-201ENSMUST00000187727 Top2bQ64511 1612 aa20.12■□□□□ 0.81
Gm28578-201ENSMUST00000187727 Wdr62Q3U3T8 1523 aa20.05■□□□□ 0.8
Gm28578-201ENSMUST00000187727 Cep164Q5DU05 1446 aa20.04■□□□□ 0.8
Gm28578-201ENSMUST00000187727 Ercc6F8VPZ5 1481 aa20.02■□□□□ 0.8
Gm28578-201ENSMUST00000187727 Esf1Q3V1V3 845 aaKnown RBP19.98■□□□□ 0.79
Gm28578-201ENSMUST00000187727 Frmpd1A2AKB4 1549 aa19.97■□□□□ 0.79
Gm28578-201ENSMUST00000187727 Thoc2B1AZI6 1594 aaKnown RBP19.94■□□□□ 0.78
Gm28578-201ENSMUST00000187727 Cngb1E1AZ71 1325 aa19.91■□□□□ 0.78
Gm28578-201ENSMUST00000187727 Fmn1Q05860 1466 aa19.88■□□□□ 0.77
Gm28578-201ENSMUST00000187727 Rsf1E9PWW9 1441 aaKnown RBP19.86■□□□□ 0.77
Gm28578-201ENSMUST00000187727 Ccdc88bQ4QRL3 1481 aa19.79■□□□□ 0.76
Gm28578-201ENSMUST00000187727 TnnQ80Z71 1560 aa19.77■□□□□ 0.76
Gm28578-201ENSMUST00000187727 Cc2d2aQ8CFW7 1633 aa19.75■□□□□ 0.75
Gm28578-201ENSMUST00000187727 Baz1bQ9Z277 1479 aa19.74■□□□□ 0.75
Gm28578-201ENSMUST00000187727 Phldb1Q6PDH0 1371 aaKnown RBP19.71■□□□□ 0.75
Gm28578-201ENSMUST00000187727 Fam135aQ6NS59 1506 aa19.71■□□□□ 0.75
Gm28578-201ENSMUST00000187727 Lamc3Q9R0B6 1581 aa19.71■□□□□ 0.75
Gm28578-201ENSMUST00000187727 Chic1Q8CBW7 227 aa19.68■□□□□ 0.74
Gm28578-201ENSMUST00000187727 Unc13aQ4KUS2 1712 aa19.66■□□□□ 0.74
Gm28578-201ENSMUST00000187727 Top2aQ01320 1528 aaKnown RBP19.65■□□□□ 0.74
Gm28578-201ENSMUST00000187727 Kif15Q6P9L6 1387 aa19.5■□□□□ 0.71
Gm28578-201ENSMUST00000187727 Rapgef2Q8CHG7 1496 aa19.42■□□□□ 0.7
Gm28578-201ENSMUST00000187727 Camsap1A2AHC3 1581 aa19.41■□□□□ 0.7
Gm28578-201ENSMUST00000187727 Ccdc18Q640L5 1455 aa19.38■□□□□ 0.69
Gm28578-201ENSMUST00000187727 Ubl4bQ9CQ84 188 aa19.34■□□□□ 0.69
Gm28578-201ENSMUST00000187727 NrkQ9R0G8 1455 aa19.31■□□□□ 0.68
Gm28578-201ENSMUST00000187727 Cux2P70298 1426 aa19.31■□□□□ 0.68
Gm28578-201ENSMUST00000187727 Gab3Q8BSM5 595 aa19.24■□□□□ 0.67
Gm28578-201ENSMUST00000187727 Grin2bQ01097 1482 aa19.23■□□□□ 0.67
Gm28578-201ENSMUST00000187727 Eif4g1Q6NZJ6 1600 aaKnown RBP19.22■□□□□ 0.67
Gm28578-201ENSMUST00000187727 Shroom4Q1W617 1475 aa19.21■□□□□ 0.67
Gm28578-201ENSMUST00000187727 Cep162Q6ZQ06 1403 aa19.21■□□□□ 0.67
Gm28578-201ENSMUST00000187727 Mrc2Q64449 1479 aa19.2■□□□□ 0.66
Gm28578-201ENSMUST00000187727 Map3k1P53349 1493 aa19.14■□□□□ 0.65
Gm28578-201ENSMUST00000187727 LrpprcQ6PB66 1392 aaKnown RBP19.13■□□□□ 0.65
Gm28578-201ENSMUST00000187727 Npm1Q61937 292 aaKnown RBP19.12■□□□□ 0.65
Gm28578-201ENSMUST00000187727 Efcab5A0JP43 1406 aa19.12■□□□□ 0.65
Gm28578-201ENSMUST00000187727 PogzQ8BZH4 1409 aaKnown RBP19.11■□□□□ 0.65
Gm28578-201ENSMUST00000187727 PtprkP35822 1457 aa19.07■□□□□ 0.64
Gm28578-201ENSMUST00000187727 Arhgap35Q91YM2 1499 aa19.05■□□□□ 0.64
Gm28578-201ENSMUST00000187727 Dnajc5bQ9CQ94 199 aa19.04■□□□□ 0.64
Gm28578-201ENSMUST00000187727 Npm2Q80W85 207 aa19.02■□□□□ 0.63
Gm28578-201ENSMUST00000187727 Il27Q8K3I6 234 aa19.01■□□□□ 0.63
Gm28578-201ENSMUST00000187727 Rpgrip1Q9EPQ2 1331 aa19■□□□□ 0.63
Gm28578-201ENSMUST00000187727 AqrQ8CFQ3 1481 aaKnown RBP19■□□□□ 0.63
Gm28578-201ENSMUST00000187727 Duox2A2AQ99 1517 aa19■□□□□ 0.63
Gm28578-201ENSMUST00000187727 Mroh2bQ7M6Y6 1581 aa18.98■□□□□ 0.63
Gm28578-201ENSMUST00000187727 Dhx29Q6PGC1 1365 aaKnown RBP18.97■□□□□ 0.63
Gm28578-201ENSMUST00000187727 Kif21aQ9QXL2 1672 aa18.93■□□□□ 0.62
Gm28578-201ENSMUST00000187727 Crocc2F6XLV1 1638 aa18.92■□□□□ 0.62
Gm28578-201ENSMUST00000187727 Clip1Q922J3 1391 aa18.86■□□□□ 0.61
Gm28578-201ENSMUST00000187727 Acin1Q9JIX8 1338 aaKnown RBP18.85■□□□□ 0.61
Gm28578-201ENSMUST00000187727 SynmQ70IV5 1561 aa18.84■□□□□ 0.61
Gm28578-201ENSMUST00000187727 Samd9lQ69Z37 1561 aa18.83■□□□□ 0.61
Gm28578-201ENSMUST00000187727 Carmil1Q6EDY6 1374 aa18.83■□□□□ 0.61
Gm28578-201ENSMUST00000187727 Gpatch8A2A6A1 1505 aa18.82■□□□□ 0.6
Gm28578-201ENSMUST00000187727 Eea1Q8BL66 1411 aa18.79■□□□□ 0.6
Gm28578-201ENSMUST00000187727 Rpap1Q80TE0 1409 aa18.75■□□□□ 0.59
Gm28578-201ENSMUST00000187727 Myt1lP97500 1187 aa18.75■□□□□ 0.59
Gm28578-201ENSMUST00000187727 Polr1aO35134 1717 aaKnown RBP18.75■□□□□ 0.59
Gm28578-201ENSMUST00000187727 Erich3F6QRE9 1637 aa18.74■□□□□ 0.59
Gm28578-201ENSMUST00000187727 Ift140E9PY46 1464 aa18.73■□□□□ 0.59
Gm28578-201ENSMUST00000187727 Pbrm1Q8BSQ9 1634 aaKnown RBP18.73■□□□□ 0.59
Gm28578-201ENSMUST00000187727 Urb2E9Q7L1 1524 aaKnown RBP18.71■□□□□ 0.59
Gm28578-201ENSMUST00000187727 Plb1Q3TTY0 1478 aa18.71■□□□□ 0.59
Gm28578-201ENSMUST00000187727 Zeb1Q64318 1117 aa18.69■□□□□ 0.58
Gm28578-201ENSMUST00000187727 Ehmt2Q9Z148 1263 aaKnown RBP18.69■□□□□ 0.58
Gm28578-201ENSMUST00000187727 Ankrd26Q811D2 1581 aa18.68■□□□□ 0.58
Gm28578-201ENSMUST00000187727 Magi3Q9EQJ9 1476 aa18.65■□□□□ 0.58
Retrieved 100 of 22,080 RNA–protein pairs in 120.4 ms