RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Krtap19-3Q925H6 87 aa4.92□□□□□ -1.62
Ccdc38-201ENSMUST00000092215 H2al1bA0A087WP11 105 aa4.92□□□□□ -1.62
Ccdc38-201ENSMUST00000092215 Krtap19-1Q925H2 87 aa4.91□□□□□ -1.62
Ccdc38-201ENSMUST00000092215 2210017I01RikA0A0A6YVV1 95 aa4.9□□□□□ -1.63
Ccdc38-201ENSMUST00000092215 Cox6b2Q80ZN9 88 aa4.9□□□□□ -1.63
Ccdc38-201ENSMUST00000092215 SmcpP15265 143 aa4.87□□□□□ -1.63
Ccdc38-201ENSMUST00000092215 Phxr4P15974 95 aa4.86□□□□□ -1.63
Ccdc38-201ENSMUST00000092215 1700042G07RikB1AUF7 90 aa4.84□□□□□ -1.63
Ccdc38-201ENSMUST00000092215 Fat4Q2PZL6 4981 aa4.84□□□□□ -1.63
Ccdc38-201ENSMUST00000092215 Gm19402J3QJV4 266 aa4.84□□□□□ -1.63
Ccdc38-201ENSMUST00000092215 Gm10382Q3V0T5 144 aa4.83□□□□□ -1.64
Ccdc38-201ENSMUST00000092215 Krtap4-1Q3UUY3 169 aa4.82□□□□□ -1.64
Ccdc38-201ENSMUST00000092215 Sec61gP60060 68 aa4.8□□□□□ -1.64
Ccdc38-201ENSMUST00000092215 Pcp4P63054 62 aa4.8□□□□□ -1.64
Ccdc38-201ENSMUST00000092215 Krtap3-1A2A591 98 aa4.8□□□□□ -1.64
Ccdc38-201ENSMUST00000092215 Rps28P62858 69 aaKnown RBP4.8□□□□□ -1.64
Ccdc38-201ENSMUST00000092215 Uqcr11Q9CPX8 56 aa4.78□□□□□ -1.64
Ccdc38-201ENSMUST00000092215 Rnf213E9Q555 5152 aaKnown RBP4.77□□□□□ -1.65
Ccdc38-201ENSMUST00000092215 Ndufb1P0DN34 57 aa4.77□□□□□ -1.65
Ccdc38-201ENSMUST00000092215 Krtap1-5A2A590 122 aa4.76□□□□□ -1.65
Ccdc38-201ENSMUST00000092215 Gm19426M0QWC7 77 aa4.76□□□□□ -1.65
Ccdc38-201ENSMUST00000092215 Limd2Q8BGB5 128 aa4.74□□□□□ -1.65
Ccdc38-201ENSMUST00000092215 BC029722A0A0N4SW31 51 aa4.73□□□□□ -1.65
Ccdc38-201ENSMUST00000092215 Spink7Q6IE32 76 aa4.68□□□□□ -1.66
Ccdc38-201ENSMUST00000092215 Krtap1-4Q3V2D6 188 aa4.66□□□□□ -1.66
Ccdc38-201ENSMUST00000092215 Gm10061D3Z714 54 aa4.6□□□□□ -1.67
Ccdc38-201ENSMUST00000092215 Gm9955Q8CEJ8 102 aa4.59□□□□□ -1.67
Ccdc38-201ENSMUST00000092215 Gm20537G3UYK7 97 aa4.56□□□□□ -1.68
Ccdc38-201ENSMUST00000092215 H2al1kJ3QP08 105 aa4.55□□□□□ -1.68
Ccdc38-201ENSMUST00000092215 Ndufs5Q99LY9 106 aa4.54□□□□□ -1.68
Ccdc38-201ENSMUST00000092215 Pla2g10Q9QXX3 151 aa4.53□□□□□ -1.68
Ccdc38-201ENSMUST00000092215 Lce1jD3YUU5 139 aa4.51□□□□□ -1.69
Ccdc38-201ENSMUST00000092215 Gm11563B1AQ90 168 aa4.51□□□□□ -1.69
Ccdc38-201ENSMUST00000092215 Krtap4-7Q9D732 168 aa4.51□□□□□ -1.69
Ccdc38-201ENSMUST00000092215 Krtap12-1Q9Z287 130 aa4.49□□□□□ -1.69
Ccdc38-201ENSMUST00000092215 H2al1mQ9DAD9 105 aa4.48□□□□□ -1.69
Ccdc38-201ENSMUST00000092215 Sox16Q62247 57 aa4.47□□□□□ -1.69
Ccdc38-201ENSMUST00000092215 SspoQ8CG65 4998 aa4.47□□□□□ -1.69
Ccdc38-201ENSMUST00000092215 Krtap17-1A2A5X6 109 aa4.47□□□□□ -1.69
Ccdc38-201ENSMUST00000092215 Gm3880A0A1B0GSB3 72 aa4.46□□□□□ -1.7
Ccdc38-201ENSMUST00000092215 Gm11555B1AQ89 175 aa4.45□□□□□ -1.7
Ccdc38-201ENSMUST00000092215 Gm11569B1AQB1 180 aa4.45□□□□□ -1.7
Ccdc38-201ENSMUST00000092215 Krtap9-5A2A5X3 358 aa4.45□□□□□ -1.7
Ccdc38-201ENSMUST00000092215 4933415A04RikQ9D443 101 aa4.43□□□□□ -1.7
Ccdc38-201ENSMUST00000092215 CriptO70333 101 aa4.42□□□□□ -1.7
Ccdc38-201ENSMUST00000092215 Krtap19-2Q925I0 141 aa4.42□□□□□ -1.7
Ccdc38-201ENSMUST00000092215 Krtap19-9aF8WH65 55 aa4.41□□□□□ -1.7
Ccdc38-201ENSMUST00000092215 Prm2P07978 107 aa4.39□□□□□ -1.71
Ccdc38-201ENSMUST00000092215 Gm10337F7DEP7 55 aa4.38□□□□□ -1.71
Ccdc38-201ENSMUST00000092215 B930094E09RikQ8C4T2 136 aa4.37□□□□□ -1.71
Ccdc38-201ENSMUST00000092215 Mdn1A2ANY6 5589 aaKnown RBP4.36□□□□□ -1.71
Ccdc38-201ENSMUST00000092215 Gm3646F6S692 53 aa4.32□□□□□ -1.72
Ccdc38-201ENSMUST00000092215 Sprr2a3Q4KL71 83 aa4.31□□□□□ -1.72
Ccdc38-201ENSMUST00000092215 Sprr2a1Q9CQK8 83 aa4.31□□□□□ -1.72
Ccdc38-201ENSMUST00000092215 A0A1Y7VJH8 109 aa4.3□□□□□ -1.72
Ccdc38-201ENSMUST00000092215 Krtap4-2B1AQ85 167 aa4.3□□□□□ -1.72
Ccdc38-201ENSMUST00000092215 Gm17402F6Z0L5 76 aa4.29□□□□□ -1.72
Ccdc38-201ENSMUST00000092215 Gm12216A0A1W2P827 62 aa4.27□□□□□ -1.73
Ccdc38-201ENSMUST00000092215 Lce1gQ9D195 139 aa4.22□□□□□ -1.73
Ccdc38-201ENSMUST00000092215 Muc5bE9Q5I3 4800 aa4.21□□□□□ -1.74
Ccdc38-201ENSMUST00000092215 Camk2n1Q6QWF9 78 aa4.2□□□□□ -1.74
Ccdc38-201ENSMUST00000092215 Lce1iQ9D6P5 149 aa4.2□□□□□ -1.74
Ccdc38-201ENSMUST00000092215 Gm6358A0A087WPH4 74 aa4.19□□□□□ -1.74
Ccdc38-201ENSMUST00000092215 Gm21887J3QQ04 176 aa4.19□□□□□ -1.74
Ccdc38-201ENSMUST00000092215 Gm19668J3QMD1 248 aa4.19□□□□□ -1.74
Ccdc38-201ENSMUST00000092215 Krtap28-10A0A1Y7VP58 119 aa4.18□□□□□ -1.74
Ccdc38-201ENSMUST00000092215 Syne2Q6ZWQ0 6874 aaKnown RBP4.17□□□□□ -1.74
Ccdc38-201ENSMUST00000092215 Lce1a2Q9D1K4 149 aa4.15□□□□□ -1.75
Ccdc38-201ENSMUST00000092215 Krtap4-6Q3V4B7 195 aa4.13□□□□□ -1.75
Ccdc38-201ENSMUST00000092215 Romo1P60603 79 aa4.12□□□□□ -1.75
Ccdc38-201ENSMUST00000092215 Gm11562A0PK51 136 aa4.11□□□□□ -1.75
Ccdc38-201ENSMUST00000092215 Mt2P02798 61 aa4.09□□□□□ -1.75
Ccdc38-201ENSMUST00000092215 Gm11596B1AQB0 205 aa4.08□□□□□ -1.76
Ccdc38-201ENSMUST00000092215 A0A1Y7VLE6 161 aa4.05□□□□□ -1.76
Ccdc38-201ENSMUST00000092215 Krtap28-13A0A087WQP5 138 aa4.02□□□□□ -1.77
Ccdc38-201ENSMUST00000092215 Gm7544A0A1Y7VJ58 118 aa4.02□□□□□ -1.77
Ccdc38-201ENSMUST00000092215 Krtap8-1O08633 61 aa4□□□□□ -1.77
Ccdc38-201ENSMUST00000092215 Fsip2A2ARZ3 6995 aa3.97□□□□□ -1.77
Ccdc38-201ENSMUST00000092215 Gm11564A2A4L9 201 aa3.93□□□□□ -1.78
Ccdc38-201ENSMUST00000092215 Gm11595B1AQA7 289 aa3.93□□□□□ -1.78
Ccdc38-201ENSMUST00000092215 Krtap4-8B1AQA8 209 aa3.93□□□□□ -1.78
Ccdc38-201ENSMUST00000092215 Krtap19-9bQ99NG9 58 aa3.92□□□□□ -1.78
Ccdc38-201ENSMUST00000092215 SvipQ3UZP4 77 aa3.91□□□□□ -1.78
Ccdc38-201ENSMUST00000092215 A030005L19RikA0A1Y7VIU2 113 aa3.9□□□□□ -1.79
Ccdc38-201ENSMUST00000092215 Krtap22-2J3QNX6 67 aa3.88□□□□□ -1.79
Ccdc38-201ENSMUST00000092215 A030005K14RikA0A1Y7VNY1 122 aa3.85□□□□□ -1.79
Ccdc38-201ENSMUST00000092215 Mt4P47945 62 aa3.85□□□□□ -1.79
Ccdc38-201ENSMUST00000092215 Krtap4-9B1AQA9 244 aa3.84□□□□□ -1.79
Ccdc38-201ENSMUST00000092215 Krtap9-3Q3V2C1 136 aa3.77□□□□□ -1.81
Ccdc38-201ENSMUST00000092215 Sprr2kO70562 68 aa3.76□□□□□ -1.81
Ccdc38-201ENSMUST00000092215 Gm38119A0A0A6YX29 146 aa3.75□□□□□ -1.81
Ccdc38-201ENSMUST00000092215 Krtap4-13Q9D7P3 165 aa3.72□□□□□ -1.81
Ccdc38-201ENSMUST00000092215 Tnp1P10856 55 aa3.69□□□□□ -1.82
Ccdc38-201ENSMUST00000092215 Krtap31-2Q8CAY5 177 aa3.69□□□□□ -1.82
Ccdc38-201ENSMUST00000092215 Krtap7-1Q9D3I6 87 aa3.68□□□□□ -1.82
Ccdc38-201ENSMUST00000092215 Mp68P56379 58 aa3.68□□□□□ -1.82
Ccdc38-201ENSMUST00000092215 Gm40193A0A1B0GT39 78 aa3.67□□□□□ -1.82
Ccdc38-201ENSMUST00000092215 Lce1hQ9D6R3 140 aa3.66□□□□□ -1.82
Ccdc38-201ENSMUST00000092215 2300003K06RikA2A4M0 262 aa3.62□□□□□ -1.83
Ccdc38-201ENSMUST00000092215 A030003K21RikA0A1Y7VIM3 128 aa3.6□□□□□ -1.83
Retrieved 100 of 22,080 RNA–protein pairs in 61.4 ms