RNA–Protein interactions for RNA: ENSMUST00000052648.8

Ccdc28a-201, Transcript of Coiled-coil domain-containing 28A, mousemouse

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Gene Ccdc28a, Length 2,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-201ENSMUST00000052648 Gm17416Q30KP4 66 aa4.57□□□□□ -1.68
Ccdc28a-201ENSMUST00000052648 Gm10160F6Y577 67 aa4.56□□□□□ -1.68
Ccdc28a-201ENSMUST00000052648 Gm38119A0A0A6YX29 146 aa4.55□□□□□ -1.68
Ccdc28a-201ENSMUST00000052648 Gm21798J3QNU5 87 aa4.55□□□□□ -1.68
Ccdc28a-201ENSMUST00000052648 Crct1Q6PAI5 102 aa4.54□□□□□ -1.68
Ccdc28a-201ENSMUST00000052648 Krtap1-3A2A588 173 aa4.53□□□□□ -1.68
Ccdc28a-201ENSMUST00000052648 H2al1aQ5M8Q2 105 aa4.53□□□□□ -1.68
Ccdc28a-201ENSMUST00000052648 4930507D05RikQ8C9C9 103 aa4.52□□□□□ -1.69
Ccdc28a-201ENSMUST00000052648 2310079G19RikQ9D6L6 185 aa4.52□□□□□ -1.69
Ccdc28a-201ENSMUST00000052648 H2al1bA0A087WP11 105 aa4.52□□□□□ -1.69
Ccdc28a-201ENSMUST00000052648 H2al1kJ3QP08 105 aa4.52□□□□□ -1.69
Ccdc28a-201ENSMUST00000052648 H2al1eQ810S6 105 aa4.52□□□□□ -1.69
Ccdc28a-201ENSMUST00000052648 H2al1mQ9DAD9 105 aa4.52□□□□□ -1.69
Ccdc28a-201ENSMUST00000052648 Krtap16-3Q8C1I6 86 aa4.5□□□□□ -1.69
Ccdc28a-201ENSMUST00000052648 Gm10643Q3URG9 111 aa4.49□□□□□ -1.69
Ccdc28a-201ENSMUST00000052648 Krtap19-1Q925H2 87 aa4.48□□□□□ -1.69
Ccdc28a-201ENSMUST00000052648 ZanO88799 5376 aa4.48□□□□□ -1.69
Ccdc28a-201ENSMUST00000052648 Fam229aB2KGE5 128 aa4.47□□□□□ -1.69
Ccdc28a-201ENSMUST00000052648 Coa5Q99M07 74 aa4.47□□□□□ -1.69
Ccdc28a-201ENSMUST00000052648 Gm45618A0A1B0GSA0 219 aa4.46□□□□□ -1.7
Ccdc28a-201ENSMUST00000052648 Gm11562A0PK51 136 aa4.46□□□□□ -1.7
Ccdc28a-201ENSMUST00000052648 Krtap19-3Q925H6 87 aa4.46□□□□□ -1.7
Ccdc28a-201ENSMUST00000052648 Rps28P62858 69 aaKnown RBP4.44□□□□□ -1.7
Ccdc28a-201ENSMUST00000052648 Gm10318A0A1W2P728 225 aa4.41□□□□□ -1.7
Ccdc28a-201ENSMUST00000052648 Gm19668J3QMD1 248 aa4.41□□□□□ -1.7
Ccdc28a-201ENSMUST00000052648 LorP18165 486 aa4.41□□□□□ -1.7
Ccdc28a-201ENSMUST00000052648 Krtap13-1Q8K198 168 aa4.4□□□□□ -1.71
Ccdc28a-201ENSMUST00000052648 Defb1P56386 69 aa4.39□□□□□ -1.71
Ccdc28a-201ENSMUST00000052648 Tmem258P61166 79 aa4.39□□□□□ -1.71
Ccdc28a-201ENSMUST00000052648 1700042G07RikB1AUF7 90 aa4.38□□□□□ -1.71
Ccdc28a-201ENSMUST00000052648 Fat4Q2PZL6 4981 aa4.38□□□□□ -1.71
Ccdc28a-201ENSMUST00000052648 Gm19935A0A1B0GSF9 52 aa4.37□□□□□ -1.71
Ccdc28a-201ENSMUST00000052648 Pet100P0DJE0 76 aa4.37□□□□□ -1.71
Ccdc28a-201ENSMUST00000052648 SnurfQ9WU12 71 aa4.37□□□□□ -1.71
Ccdc28a-201ENSMUST00000052648 SptssbQ925E8 76 aa4.35□□□□□ -1.71
Ccdc28a-201ENSMUST00000052648 Rnf213E9Q555 5152 aaKnown RBP4.34□□□□□ -1.71
Ccdc28a-201ENSMUST00000052648 Krtap1-5A2A590 122 aa4.34□□□□□ -1.72
Ccdc28a-201ENSMUST00000052648 Krtap1-4Q3V2D6 188 aa4.34□□□□□ -1.72
Ccdc28a-201ENSMUST00000052648 Cox6b2Q80ZN9 88 aa4.33□□□□□ -1.72
Ccdc28a-201ENSMUST00000052648 Prm2P07978 107 aa4.32□□□□□ -1.72
Ccdc28a-201ENSMUST00000052648 Lce1a1Q9CQH5 143 aa4.32□□□□□ -1.72
Ccdc28a-201ENSMUST00000052648 Lce1gQ9D195 139 aa4.32□□□□□ -1.72
Ccdc28a-201ENSMUST00000052648 Cdc42se1Q8BHL7 80 aa4.32□□□□□ -1.72
Ccdc28a-201ENSMUST00000052648 Brk1Q91VR8 75 aa4.3□□□□□ -1.72
Ccdc28a-201ENSMUST00000052648 Krtap3-1A2A591 98 aa4.3□□□□□ -1.72
Ccdc28a-201ENSMUST00000052648 Gm20661K7N787 53 aa4.29□□□□□ -1.72
Ccdc28a-201ENSMUST00000052648 Gm17606F6ZL36 78 aa4.28□□□□□ -1.72
Ccdc28a-201ENSMUST00000052648 Serp1Q9Z1W5 66 aa4.25□□□□□ -1.73
Ccdc28a-201ENSMUST00000052648 Phxr4P15974 95 aa4.21□□□□□ -1.73
Ccdc28a-201ENSMUST00000052648 Gm10061D3Z714 54 aa4.2□□□□□ -1.74
Ccdc28a-201ENSMUST00000052648 Gm20538F6Z9R1 75 aa4.19□□□□□ -1.74
Ccdc28a-201ENSMUST00000052648 Gm10382Q3V0T5 144 aa4.19□□□□□ -1.74
Ccdc28a-201ENSMUST00000052648 Uqcr11Q9CPX8 56 aa4.18□□□□□ -1.74
Ccdc28a-201ENSMUST00000052648 SspoQ8CG65 4998 aa4.17□□□□□ -1.74
Ccdc28a-201ENSMUST00000052648 Gm19426M0QWC7 77 aa4.16□□□□□ -1.74
Ccdc28a-201ENSMUST00000052648 BC029722A0A0N4SW31 51 aa4.16□□□□□ -1.74
Ccdc28a-201ENSMUST00000052648 Gm20537G3UYK7 97 aa4.15□□□□□ -1.74
Ccdc28a-201ENSMUST00000052648 Limd2Q8BGB5 128 aa4.14□□□□□ -1.75
Ccdc28a-201ENSMUST00000052648 Gm11569B1AQB1 180 aa4.12□□□□□ -1.75
Ccdc28a-201ENSMUST00000052648 Ndufb1P0DN34 57 aa4.11□□□□□ -1.75
Ccdc28a-201ENSMUST00000052648 4933415A04RikQ9D443 101 aa4.06□□□□□ -1.76
Ccdc28a-201ENSMUST00000052648 Gm3646F6S692 53 aa4.04□□□□□ -1.76
Ccdc28a-201ENSMUST00000052648 Krtap12-1Q9Z287 130 aa4.04□□□□□ -1.76
Ccdc28a-201ENSMUST00000052648 Lce1jD3YUU5 139 aa4.04□□□□□ -1.76
Ccdc28a-201ENSMUST00000052648 Gm39115A0A1B0GSH7 232 aa4.02□□□□□ -1.77
Ccdc28a-201ENSMUST00000052648 CriptO70333 101 aa4.02□□□□□ -1.77
Ccdc28a-201ENSMUST00000052648 Lce1lQ9D1G7 135 aa4.02□□□□□ -1.77
Ccdc28a-201ENSMUST00000052648 Gm9955Q8CEJ8 102 aa4.01□□□□□ -1.77
Ccdc28a-201ENSMUST00000052648 Spink7Q6IE32 76 aa4.01□□□□□ -1.77
Ccdc28a-201ENSMUST00000052648 Krtap19-2Q925I0 141 aa4□□□□□ -1.77
Ccdc28a-201ENSMUST00000052648 Krtap9-5A2A5X3 358 aa3.97□□□□□ -1.77
Ccdc28a-201ENSMUST00000052648 Krtap19-9aF8WH65 55 aa3.97□□□□□ -1.77
Ccdc28a-201ENSMUST00000052648 Syne2Q6ZWQ0 6874 aaKnown RBP3.97□□□□□ -1.77
Ccdc28a-201ENSMUST00000052648 Gm12216A0A1W2P827 62 aa3.96□□□□□ -1.78
Ccdc28a-201ENSMUST00000052648 Mp68P56379 58 aa3.96□□□□□ -1.78
Ccdc28a-201ENSMUST00000052648 B930094E09RikQ8C4T2 136 aa3.94□□□□□ -1.78
Ccdc28a-201ENSMUST00000052648 Pla2g10Q9QXX3 151 aa3.92□□□□□ -1.78
Ccdc28a-201ENSMUST00000052648 Gm11596B1AQB0 205 aa3.91□□□□□ -1.78
Ccdc28a-201ENSMUST00000052648 Muc5bE9Q5I3 4800 aa3.91□□□□□ -1.78
Ccdc28a-201ENSMUST00000052648 Gm17402F6Z0L5 76 aa3.91□□□□□ -1.78
Ccdc28a-201ENSMUST00000052648 Sprr2a3Q4KL71 83 aa3.88□□□□□ -1.79
Ccdc28a-201ENSMUST00000052648 Sprr2a1Q9CQK8 83 aa3.88□□□□□ -1.79
Ccdc28a-201ENSMUST00000052648 Krtap4-9B1AQA9 244 aa3.85□□□□□ -1.79
Ccdc28a-201ENSMUST00000052648 Gm11554B1AQB2 190 aa3.81□□□□□ -1.8
Ccdc28a-201ENSMUST00000052648 Gm6358A0A087WPH4 74 aa3.79□□□□□ -1.8
Ccdc28a-201ENSMUST00000052648 Krtap4-6Q3V4B7 195 aa3.79□□□□□ -1.8
Ccdc28a-201ENSMUST00000052648 Lce1iQ9D6P5 149 aa3.79□□□□□ -1.8
Ccdc28a-201ENSMUST00000052648 Krtap31-2Q8CAY5 177 aa3.77□□□□□ -1.81
Ccdc28a-201ENSMUST00000052648 Krtap31-1Q9D644 177 aa3.75□□□□□ -1.81
Ccdc28a-201ENSMUST00000052648 Gm3880A0A1B0GSB3 72 aa3.75□□□□□ -1.81
Ccdc28a-201ENSMUST00000052648 Gm29735A0A1B0GT06 219 aa3.74□□□□□ -1.81
Ccdc28a-201ENSMUST00000052648 Ndufs5Q99LY9 106 aa3.74□□□□□ -1.81
Ccdc28a-201ENSMUST00000052648 Lce1a2Q9D1K4 149 aa3.73□□□□□ -1.81
Ccdc28a-201ENSMUST00000052648 Mdn1A2ANY6 5589 aaKnown RBP3.7□□□□□ -1.82
Ccdc28a-201ENSMUST00000052648 Gm11564A2A4L9 201 aa3.66□□□□□ -1.82
Ccdc28a-201ENSMUST00000052648 Gm11595B1AQA7 289 aa3.66□□□□□ -1.82
Ccdc28a-201ENSMUST00000052648 Krtap4-8B1AQA8 209 aa3.66□□□□□ -1.82
Ccdc28a-201ENSMUST00000052648 Mt2P02798 61 aa3.66□□□□□ -1.82
Ccdc28a-201ENSMUST00000052648 Romo1P60603 79 aa3.61□□□□□ -1.83
Ccdc28a-201ENSMUST00000052648 Camk2n1Q6QWF9 78 aa3.61□□□□□ -1.83
Retrieved 100 of 22,080 RNA–protein pairs in 45.7 ms