RNA–Protein interactions for RNA: YPR173C

VPS4, Transcript of AAA-ATPase involved in multivesicular body (MVB) protein sorting, yeastyeast

Gene VPS4, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS4YPR173C BUD2P33314 1104 aa6.09□□□□□ -1.43
VPS4YPR173C UTP11P34247 250 aaPredicted RBP6.09□□□□□ -1.43
VPS4YPR173C STV1P37296 890 aa6.09□□□□□ -1.43
VPS4YPR173C PDX3P38075 228 aaKnown RBP6.09□□□□□ -1.43
VPS4YPR173C YDR089WP38966 869 aa6.09□□□□□ -1.43
VPS4YPR173C YJL206CP39529 758 aa6.09□□□□□ -1.43
VPS4YPR173C SSP120P39931 234 aaKnown RBP6.09□□□□□ -1.43
VPS4YPR173C KHA1P40309 873 aa6.09□□□□□ -1.43
VPS4YPR173C PEP8P40335 379 aa6.09□□□□□ -1.43
VPS4YPR173C JJJ3P47138 172 aa6.09□□□□□ -1.43
VPS4YPR173C UTP8P53276 713 aaKnown RBP6.09□□□□□ -1.43
VPS4YPR173C DCP2P53550 970 aaKnown RBP6.09□□□□□ -1.43
VPS4YPR173C YNL247WP53852 767 aaKnown RBP6.09□□□□□ -1.43
VPS4YPR173C TEP1P53916 434 aa6.09□□□□□ -1.43
VPS4YPR173C KRE28Q04431 385 aa6.09□□□□□ -1.43
VPS4YPR173C YSH1Q06224 779 aaPredicted RBP6.09□□□□□ -1.43
VPS4YPR173C ATG26Q06321 1198 aa6.09□□□□□ -1.43
VPS4YPR173C GUD1Q07729 489 aa6.09□□□□□ -1.43
VPS4YPR173C PEX15Q08215 383 aa6.09□□□□□ -1.43
VPS4YPR173C CUE5Q08412 411 aaKnown RBP6.09□□□□□ -1.43
VPS4YPR173C ECM3Q99252 613 aa6.09□□□□□ -1.43
VPS4YPR173C SEM1O94742 89 aa6.08□□□□□ -1.44
VPS4YPR173C TEF1P02994 458 aaKnown RBP6.08□□□□□ -1.44
VPS4YPR173C PAB1P04147 577 aaKnown RBP RIP-Chip data6.08□□□□□ -1.44not detected
VPS4YPR173C RAD18P10862 487 aa6.08□□□□□ -1.44
VPS4YPR173C GFD2P25370 566 aaKnown RBP6.08□□□□□ -1.44
VPS4YPR173C TIF3P34167 436 aaKnown RBP6.08□□□□□ -1.44
VPS4YPR173C SPC42P36094 363 aa6.08□□□□□ -1.44
VPS4YPR173C PHO88P38264 188 aaPredicted RBP6.08□□□□□ -1.44
VPS4YPR173C SWC5P38326 303 aa6.08□□□□□ -1.44
VPS4YPR173C FLC2P39719 783 aa6.08□□□□□ -1.44
VPS4YPR173C SNL1P40548 159 aa6.08□□□□□ -1.44
VPS4YPR173C CCT7P42943 550 aaKnown RBP6.08□□□□□ -1.44
VPS4YPR173C SNZ3P43545 298 aa6.08□□□□□ -1.44
VPS4YPR173C FMP32P43557 207 aa6.08□□□□□ -1.44
VPS4YPR173C BNA3P47039 444 aaKnown RBP6.08□□□□□ -1.44
VPS4YPR173C MTC3P53077 123 aa6.08□□□□□ -1.44
VPS4YPR173C SNZ2P53824 298 aa6.08□□□□□ -1.44
VPS4YPR173C YNL058CP53947 316 aa6.08□□□□□ -1.44
VPS4YPR173C PRO2P54885 456 aaKnown RBP6.08□□□□□ -1.44
VPS4YPR173C YCS4Q06156 1176 aa6.08□□□□□ -1.44
VPS4YPR173C YOR059CQ08448 450 aaKnown RBP6.08□□□□□ -1.44
VPS4YPR173C MCH5Q08777 521 aa6.08□□□□□ -1.44
VPS4YPR173C TUB2P02557 457 aaKnown RBP6.07□□□□□ -1.44
VPS4YPR173C TUB1P09733 447 aaKnown RBP6.07□□□□□ -1.44
VPS4YPR173C FUS1P11710 512 aa6.07□□□□□ -1.44
VPS4YPR173C SAN1P22470 610 aa6.07□□□□□ -1.44
VPS4YPR173C VPS34P22543 875 aa6.07□□□□□ -1.44
VPS4YPR173C RPS5P26783 225 aaKnown RBP6.07□□□□□ -1.44
VPS4YPR173C MEI4P29467 408 aa6.07□□□□□ -1.44
VPS4YPR173C RPN2P32565 945 aaKnown RBP6.07□□□□□ -1.44
VPS4YPR173C RRN3P36070 627 aa6.07□□□□□ -1.44
VPS4YPR173C ERT1P38140 529 aa6.07□□□□□ -1.44
VPS4YPR173C CBR1P38626 284 aaKnown RBP6.07□□□□□ -1.44
VPS4YPR173C UTP9P38882 575 aaKnown RBP6.07□□□□□ -1.44
VPS4YPR173C NPT1P39683 429 aaKnown RBP6.07□□□□□ -1.44
VPS4YPR173C SAW1P39735 261 aa6.07□□□□□ -1.44
VPS4YPR173C IES5P40060 125 aa6.07□□□□□ -1.44
VPS4YPR173C YRB1P41920 201 aaKnown RBP6.07□□□□□ -1.44
VPS4YPR173C RSC8P43609 557 aaKnown RBP6.07□□□□□ -1.44
VPS4YPR173C POL31P46957 487 aa6.07□□□□□ -1.44
VPS4YPR173C ALY2P47029 1046 aa6.07□□□□□ -1.44
VPS4YPR173C TAH11P47112 604 aa6.07□□□□□ -1.44
VPS4YPR173C ORM1P53224 222 aa6.07□□□□□ -1.44
VPS4YPR173C RTT102P53330 157 aa6.07□□□□□ -1.44
VPS4YPR173C YTP1P53584 459 aa6.07□□□□□ -1.44
VPS4YPR173C ASI2P53895 289 aa6.07□□□□□ -1.44
VPS4YPR173C ROD1Q02805 837 aa6.07□□□□□ -1.44
VPS4YPR173C RSM24Q03976 319 aa6.07□□□□□ -1.44
VPS4YPR173C RAD30Q04049 632 aa6.07□□□□□ -1.44
VPS4YPR173C DAL4Q04895 635 aa6.07□□□□□ -1.44
VPS4YPR173C SPC2Q04969 178 aa6.07□□□□□ -1.44
VPS4YPR173C RIF1P29539 1916 aa6.07□□□□□ -1.44
VPS4YPR173C ZIP1P31111 875 aa6.06□□□□□ -1.44
VPS4YPR173C ATO2P32907 282 aa6.06□□□□□ -1.44
VPS4YPR173C ETP1P38748 585 aaKnown RBP6.06□□□□□ -1.44
VPS4YPR173C BZZ1P38822 633 aa6.06□□□□□ -1.44
VPS4YPR173C CKB2P38930 258 aa6.06□□□□□ -1.44
VPS4YPR173C ERP2P39704 215 aa6.06□□□□□ -1.44
VPS4YPR173C IRR1P40541 1150 aa6.06□□□□□ -1.44
VPS4YPR173C INP51P40559 946 aaKnown RBP6.06□□□□□ -1.44
VPS4YPR173C CHS6P40955 746 aa6.06□□□□□ -1.44
VPS4YPR173C AVT1P47082 602 aa6.06□□□□□ -1.44
VPS4YPR173C TRF5P48561 642 aaKnown RBP6.06□□□□□ -1.44
VPS4YPR173C MON1P53129 644 aa6.06□□□□□ -1.44
VPS4YPR173C YDR239CQ03780 787 aa6.06□□□□□ -1.44
VPS4YPR173C YET2Q04210 160 aa6.06□□□□□ -1.44
VPS4YPR173C YMR074CQ04773 145 aa6.06□□□□□ -1.44
VPS4YPR173C SPR28Q04921 423 aa6.06□□□□□ -1.44
VPS4YPR173C CRF1Q04930 467 aa6.06□□□□□ -1.44
VPS4YPR173C FMP42Q04991 504 aa6.06□□□□□ -1.44
VPS4YPR173C HPF1Q05164 967 aa6.06□□□□□ -1.44
VPS4YPR173C SVF1Q05515 481 aa6.06□□□□□ -1.44
VPS4YPR173C COQ9Q05779 260 aa6.06□□□□□ -1.44
VPS4YPR173C IES4Q08561 116 aa6.06□□□□□ -1.44
VPS4YPR173C CIR2Q08822 631 aa6.06□□□□□ -1.44
VPS4YPR173C TMA46Q12000 345 aaKnown RBP6.06□□□□□ -1.44
VPS4YPR173C OSW2Q12202 724 aa6.06□□□□□ -1.44
VPS4YPR173C KCS1Q12494 1050 aa6.06□□□□□ -1.44
VPS4YPR173C CAR1P00812 333 aaKnown RBP6.05□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 22.7 ms