RNA–Protein interactions for RNA: YPL104W

MSD1, Transcript of Mitochondrial aspartyl-tRNA synthetase, yeastyeast

Gene MSD1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSD1YPL104W SPC98P53540 846 aa3.72□□□□□ -1.81
MSD1YPL104W COG6P53959 839 aa3.72□□□□□ -1.81
MSD1YPL104W STP1Q00947 519 aa3.72□□□□□ -1.81
MSD1YPL104W USA1Q03714 838 aa3.72□□□□□ -1.81
MSD1YPL104W RKM2Q03942 479 aa3.72□□□□□ -1.81
MSD1YPL104W SDH5Q08230 162 aa3.72□□□□□ -1.81
MSD1YPL104W MDM12Q92328 271 aa3.72□□□□□ -1.81
MSD1YPL104W MPD2Q99316 277 aa3.72□□□□□ -1.81
MSD1YPL104W YPK1P12688 680 aaKnown RBP3.72□□□□□ -1.81
MSD1YPL104W HEM15P16622 393 aa3.72□□□□□ -1.81
MSD1YPL104W CBF1P17106 351 aa3.72□□□□□ -1.81
MSD1YPL104W MGT1P26188 188 aa3.72□□□□□ -1.81
MSD1YPL104W POT1P27796 417 aaKnown RBP RIP-Chip data3.72□□□□□ -1.81not detected
MSD1YPL104W MEI4P29467 408 aa3.72□□□□□ -1.81
MSD1YPL104W TPS2P31688 896 aaKnown RBP3.72□□□□□ -1.81
MSD1YPL104W BAP2P38084 609 aa3.72□□□□□ -1.81
MSD1YPL104W YBR071WP38243 211 aa3.72□□□□□ -1.81
MSD1YPL104W HSL7P38274 827 aa3.72□□□□□ -1.81
MSD1YPL104W XDJ1P39102 459 aa3.72□□□□□ -1.81
MSD1YPL104W ERP2P39704 215 aa3.72□□□□□ -1.81
MSD1YPL104W FLC2P39719 783 aa3.72□□□□□ -1.81
MSD1YPL104W SIP5P40210 489 aaKnown RBP3.72□□□□□ -1.81
MSD1YPL104W MKT1P40850 830 aaKnown RBP3.72□□□□□ -1.81
MSD1YPL104W CNN1P43618 361 aa3.72□□□□□ -1.81
MSD1YPL104W YJL045WP47052 634 aa3.72□□□□□ -1.81
MSD1YPL104W ZIP2P53061 704 aa3.72□□□□□ -1.81
MSD1YPL104W SLG1P54867 378 aa3.72□□□□□ -1.81
MSD1YPL104W YMR027WQ04371 470 aa3.72□□□□□ -1.81
MSD1YPL104W PIG1Q06216 648 aa3.72□□□□□ -1.81
MSD1YPL104W THI20Q08224 551 aa3.72□□□□□ -1.81
MSD1YPL104W THI21Q08975 551 aa3.72□□□□□ -1.81
MSD1YPL104W RRD2Q12461 358 aa3.72□□□□□ -1.81
MSD1YPL104W YDR524C-BQ3E6R4 66 aa3.72□□□□□ -1.81
MSD1YPL104W CMD1P06787 147 aaKnown RBP3.71□□□□□ -1.82
MSD1YPL104W HEM1P09950 548 aaPredicted RBP3.71□□□□□ -1.82
MSD1YPL104W TY1A-LR4P0C2I8 440 aaKnown RBP3.71□□□□□ -1.82
MSD1YPL104W TY1A-DR6P0CX70 440 aa3.71□□□□□ -1.82
MSD1YPL104W TY1A-ER1P0CX71 440 aa3.71□□□□□ -1.82
MSD1YPL104W TY1A-LR2P0CX72 440 aa3.71□□□□□ -1.82
MSD1YPL104W TY1A-PLP0CX73 440 aa3.71□□□□□ -1.82
MSD1YPL104W TY1A-JR1P0CX74 440 aa3.71□□□□□ -1.82
MSD1YPL104W TY1A-LR3P0CX75 440 aa3.71□□□□□ -1.82
MSD1YPL104W TY1A-ML2P0CX76 440 aa3.71□□□□□ -1.82
MSD1YPL104W CDC24P11433 854 aaPredicted RBP3.71□□□□□ -1.82
MSD1YPL104W KAR4P25583 335 aa3.71□□□□□ -1.82
MSD1YPL104W YCR051WP25631 222 aa3.71□□□□□ -1.82
MSD1YPL104W DEP1P31385 405 aa3.71□□□□□ -1.82
MSD1YPL104W AAR2P32357 355 aaPredicted RBP3.71□□□□□ -1.82
MSD1YPL104W PEX2P32800 271 aa3.71□□□□□ -1.82
MSD1YPL104W DOM34P33309 386 aa3.71□□□□□ -1.82
MSD1YPL104W VRP1P37370 817 aa3.71□□□□□ -1.82
MSD1YPL104W APN2P38207 520 aa3.71□□□□□ -1.82
MSD1YPL104W GDT1P38301 280 aaPredicted RBP3.71□□□□□ -1.82
MSD1YPL104W AVT2P39981 480 aa3.71□□□□□ -1.82
MSD1YPL104W DSN1P40568 576 aa3.71□□□□□ -1.82
MSD1YPL104W SLS1P42900 643 aa3.71□□□□□ -1.82
MSD1YPL104W YJR124CP47159 448 aa3.71□□□□□ -1.82
MSD1YPL104W YGR283CP53336 341 aaPredicted RBP3.71□□□□□ -1.82
MSD1YPL104W TGL2P54857 326 aa3.71□□□□□ -1.82
MSD1YPL104W ELP3Q02908 557 aaKnown RBP3.71□□□□□ -1.82
MSD1YPL104W TAF9Q05027 157 aa3.71□□□□□ -1.82
MSD1YPL104W RSC2Q06488 889 aa3.71□□□□□ -1.82
MSD1YPL104W ESC8Q08119 714 aa3.71□□□□□ -1.82
MSD1YPL104W APC5Q08683 685 aa3.71□□□□□ -1.82
MSD1YPL104W TAF10Q12030 206 aa3.71□□□□□ -1.82
MSD1YPL104W TY1A-GR1Q12085 440 aa3.71□□□□□ -1.82
MSD1YPL104W YLL056CQ12177 298 aa3.71□□□□□ -1.82
MSD1YPL104W YPR071WQ12346 211 aa3.71□□□□□ -1.82
MSD1YPL104W TY1A-PR3Q6Q5H1 440 aaKnown RBP3.71□□□□□ -1.82
MSD1YPL104W TY1A-OLQ92392 440 aaKnown RBP3.71□□□□□ -1.82
MSD1YPL104W IZH4Q99393 312 aa3.71□□□□□ -1.82
MSD1YPL104W ATP4P05626 244 aa3.71□□□□□ -1.82
MSD1YPL104W HAP2P06774 265 aa3.71□□□□□ -1.82
MSD1YPL104W ILV2P07342 687 aaKnown RBP3.71□□□□□ -1.82
MSD1YPL104W MSD1P15179 658 aaKnown RBP3.71□□□□□ -1.82
MSD1YPL104W IDI1P15496 288 aa3.71□□□□□ -1.82
MSD1YPL104W MRPL25P23369 157 aa3.71□□□□□ -1.82
MSD1YPL104W CLB1P24868 471 aa3.71□□□□□ -1.82
MSD1YPL104W ADD66P36040 267 aa3.71□□□□□ -1.82
MSD1YPL104W MRPL16P38064 232 aa3.71□□□□□ -1.82
MSD1YPL104W MSR1P38714 643 aa3.71□□□□□ -1.82
MSD1YPL104W NEM1P38757 446 aa3.71□□□□□ -1.82
MSD1YPL104W CKB2P38930 258 aa3.71□□□□□ -1.82
MSD1YPL104W SCC4P40090 624 aa3.71□□□□□ -1.82
MSD1YPL104W GPP1P41277 250 aaKnown RBP3.71□□□□□ -1.82
MSD1YPL104W UBP6P43593 499 aaKnown RBP3.71□□□□□ -1.82
MSD1YPL104W POL31P46957 487 aa3.71□□□□□ -1.82
MSD1YPL104W ALY2P47029 1046 aa3.71□□□□□ -1.82
MSD1YPL104W PEX31P53203 462 aa3.71□□□□□ -1.82
MSD1YPL104W YGR035CP53222 116 aa3.71□□□□□ -1.82
MSD1YPL104W HST3P53687 447 aa3.71□□□□□ -1.82
MSD1YPL104W YNR063WP53749 607 aa3.71□□□□□ -1.82
MSD1YPL104W KTR5P53966 522 aaPredicted RBP3.71□□□□□ -1.82
MSD1YPL104W BET4Q00618 327 aa3.71□□□□□ -1.82
MSD1YPL104W YPL062WQ02781 134 aa3.71□□□□□ -1.82
MSD1YPL104W SKY1Q03656 742 aa3.71□□□□□ -1.82
MSD1YPL104W TPO1Q07824 586 aa3.71□□□□□ -1.82
MSD1YPL104W NBP2Q12163 236 aa3.71□□□□□ -1.82
MSD1YPL104W NCA2Q12374 616 aa3.71□□□□□ -1.82
MSD1YPL104W NKP1Q12493 238 aa3.71□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 33.6 ms