RNA–Protein interactions for RNA: YPL089C

RLM1, Transcript of MADS-box transcription factor, yeast

Gene RLM1, Length 2,031 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RLM1	YPL089C	RTP1	Q12751	981 aa		1.93	□□□□□ -2.1
RLM1	YPL089C	YMR084W	A2P2R3	262 aa		1.92	□□□□□ -2.1
RLM1	YPL089C	INH1	P01097	85 aa		1.92	□□□□□ -2.1
RLM1	YPL089C	NUP1	P20676	1076 aa		1.92	□□□□□ -2.1
RLM1	YPL089C	RPS7A	P26786	190 aa	Known RBP	1.92	□□□□□ -2.1
RLM1	YPL089C	IMP2'	P32351	346 aa		1.92	□□□□□ -2.1
RLM1	YPL089C	DSS4	P32601	143 aa		1.92	□□□□□ -2.1
RLM1	YPL089C	RPC34	P32910	317 aa		1.92	□□□□□ -2.1
RLM1	YPL089C	RPT3	P33298	428 aa	Known RBP	1.92	□□□□□ -2.1
RLM1	YPL089C	LOT5	P34234	306 aa		1.92	□□□□□ -2.1
RLM1	YPL089C	EXO1	P39875	702 aa		1.92	□□□□□ -2.1
RLM1	YPL089C	NDE1	P40215	560 aa		1.92	□□□□□ -2.1
RLM1	YPL089C	DPH1	P40487	425 aa	Known RBP	1.92	□□□□□ -2.1
RLM1	YPL089C	MDM1	Q01846	1127 aa		1.92	□□□□□ -2.1
RLM1	YPL089C	GFD1	Q04839	188 aa	Known RBP	1.92	□□□□□ -2.1
RLM1	YPL089C	COX17	Q12287	69 aa		1.92	□□□□□ -2.1
RLM1	YPL089C	MED1	Q12321	566 aa		1.92	□□□□□ -2.1
RLM1	YPL089C	SUL2	Q12325	893 aa		1.92	□□□□□ -2.1
RLM1	YPL089C	ENT1	Q12518	454 aa		1.92	□□□□□ -2.1
RLM1	YPL089C	PCD1	Q12524	340 aa		1.92	□□□□□ -2.1
RLM1	YPL089C	FUM1	P08417	488 aa	Known RBP	1.91	□□□□□ -2.1
RLM1	YPL089C	HEM1	P09950	548 aa	Predicted RBP	1.91	□□□□□ -2.1
RLM1	YPL089C	AQY1	P0CD91	305 aa		1.91	□□□□□ -2.1
RLM1	YPL089C	RNR3	P21672	869 aa	Known RBP	1.91	□□□□□ -2.1
RLM1	YPL089C	SAN1	P22470	610 aa		1.91	□□□□□ -2.1
RLM1	YPL089C	PTP1	P25044	335 aa		1.91	□□□□□ -2.1
RLM1	YPL089C	MPE1	P35728	441 aa	Known RBP	1.91	□□□□□ -2.1
RLM1	YPL089C	YEL068C	P39977	110 aa		1.91	□□□□□ -2.1
RLM1	YPL089C	ARB1	P40024	610 aa	Known RBP	1.91	□□□□□ -2.1
RLM1	YPL089C	XBP1	P40489	647 aa		1.91	□□□□□ -2.1
RLM1	YPL089C	GAT1	P43574	510 aa		1.91	□□□□□ -2.1
RLM1	YPL089C	YFL015C	P43578	164 aa		1.91	□□□□□ -2.1
RLM1	YPL089C	IDS2	P46958	469 aa		1.91	□□□□□ -2.1
RLM1	YPL089C	SNO4	Q04902	237 aa		1.91	□□□□□ -2.1
RLM1	YPL089C	HSP33	Q08914	237 aa	Known RBP	1.91	□□□□□ -2.1
RLM1	YPL089C	HSP32	Q08992	237 aa		1.91	□□□□□ -2.1
RLM1	YPL089C	AAC1	P04710	309 aa		1.91	□□□□□ -2.1
RLM1	YPL089C	TPK1	P06244	397 aa		1.91	□□□□□ -2.1
RLM1	YPL089C	PET122	P10355	254 aa		1.91	□□□□□ -2.1
RLM1	YPL089C	RAD16	P31244	790 aa		1.91	□□□□□ -2.1
RLM1	YPL089C	CBF2	P32504	956 aa		1.91	□□□□□ -2.1
RLM1	YPL089C	MFT1	P33441	392 aa	Known RBP	1.91	□□□□□ -2.1
RLM1	YPL089C	TEF4	P36008	412 aa	Known RBP	1.91	□□□□□ -2.1
RLM1	YPL089C	VPS8	P39702	1274 aa		1.91	□□□□□ -2.1
RLM1	YPL089C	NOP16	P40007	231 aa	Known RBP	1.91	□□□□□ -2.1
RLM1	YPL089C	NET1	P47035	1189 aa		1.91	□□□□□ -2.1
RLM1	YPL089C	UPF3	P48412	387 aa	Known RBP	1.91	□□□□□ -2.1
RLM1	YPL089C	PSP1	P50896	841 aa	Known RBP	1.91	□□□□□ -2.1
RLM1	YPL089C	ESF2	P53743	316 aa	Known RBP	1.91	□□□□□ -2.1
RLM1	YPL089C	YPL108W	Q02872	168 aa	Predicted RBP	1.91	□□□□□ -2.1
RLM1	YPL089C	TSR2	Q06672	205 aa	Known RBP	1.91	□□□□□ -2.1
RLM1	YPL089C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	1.91	□□□□□ -2.1	not detected
RLM1	YPL089C	FRE7	Q12333	620 aa		1.91	□□□□□ -2.1
RLM1	YPL089C	AAC3	P18238	307 aa		1.9	□□□□□ -2.11
RLM1	YPL089C	MRPL9	P31334	269 aa		1.9	□□□□□ -2.11
RLM1	YPL089C	CNS1	P33313	385 aa		1.9	□□□□□ -2.11
RLM1	YPL089C	ESL1	P40456	1118 aa		1.9	□□□□□ -2.11
RLM1	YPL089C	TDA10	P42938	290 aa		1.9	□□□□□ -2.11
RLM1	YPL089C	COG1	P53079	417 aa		1.9	□□□□□ -2.11
RLM1	YPL089C	WAR1	Q03631	944 aa		1.9	□□□□□ -2.11
RLM1	YPL089C	ATP2	P00830	511 aa	Known RBP	1.9	□□□□□ -2.11
RLM1	YPL089C	CDC31	P06704	161 aa	Known RBP	1.9	□□□□□ -2.11
RLM1	YPL089C	CDC16	P09798	840 aa		1.9	□□□□□ -2.11
RLM1	YPL089C	YPK1	P12688	680 aa	Known RBP	1.9	□□□□□ -2.11
RLM1	YPL089C	YCR061W	P25639	631 aa		1.9	□□□□□ -2.11
RLM1	YPL089C	GSY2	P27472	705 aa		1.9	□□□□□ -2.11
RLM1	YPL089C	SWC3	P31376	625 aa		1.9	□□□□□ -2.11
RLM1	YPL089C	GCD7	P32502	381 aa	Predicted RBP	1.9	□□□□□ -2.11
RLM1	YPL089C	CDC5	P32562	705 aa		1.9	□□□□□ -2.11
RLM1	YPL089C	PAH1	P32567	862 aa		1.9	□□□□□ -2.11
RLM1	YPL089C	ESL2	P36168	1195 aa		1.9	□□□□□ -2.11
RLM1	YPL089C	JNM1	P36224	373 aa		1.9	□□□□□ -2.11
RLM1	YPL089C	APD1	P38281	316 aa		1.9	□□□□□ -2.11
RLM1	YPL089C	RIC1	P40395	1056 aa		1.9	□□□□□ -2.11
RLM1	YPL089C	ULP2	P40537	1034 aa	Predicted RBP	1.9	□□□□□ -2.11
RLM1	YPL089C	OPT1	P40897	799 aa		1.9	□□□□□ -2.11
RLM1	YPL089C	NMD5	P46970	1048 aa		1.9	□□□□□ -2.11
RLM1	YPL089C	ZAP1	P47043	880 aa		1.9	□□□□□ -2.11
RLM1	YPL089C	YJL043W	P47053	257 aa		1.9	□□□□□ -2.11
RLM1	YPL089C	ATP23	P53722	227 aa		1.9	□□□□□ -2.11
RLM1	YPL089C	CSL4	P53859	292 aa	Predicted RBP	1.9	□□□□□ -2.11
RLM1	YPL089C	CRF1	Q04930	467 aa		1.9	□□□□□ -2.11
RLM1	YPL089C	IRC3	Q06683	689 aa		1.9	□□□□□ -2.11
RLM1	YPL089C	IMH1	Q06704	911 aa	Known RBP	1.9	□□□□□ -2.11
RLM1	YPL089C	VAM6	Q07468	1049 aa		1.9	□□□□□ -2.11
RLM1	YPL089C	SDH5	Q08230	162 aa		1.9	□□□□□ -2.11
RLM1	YPL089C	PCL8	Q08966	492 aa		1.9	□□□□□ -2.11
RLM1	YPL089C	SEC3	P33332	1336 aa	Known RBP	1.89	□□□□□ -2.11
RLM1	YPL089C	YLR302C	O13544	120 aa		1.89	□□□□□ -2.11
RLM1	YPL089C	TY2A-LR1	P0C2J4	438 aa		1.89	□□□□□ -2.11
RLM1	YPL089C	TY2A-F	P0CX61	438 aa		1.89	□□□□□ -2.11
RLM1	YPL089C	TY2A-GR2	P0CX62	438 aa		1.89	□□□□□ -2.11
RLM1	YPL089C	TY2A-C	P25383	438 aa		1.89	□□□□□ -2.11
RLM1	YPL089C	YJU2	P28320	278 aa	Predicted RBP	1.89	□□□□□ -2.11
RLM1	YPL089C	NUP120	P35729	1037 aa		1.89	□□□□□ -2.11
RLM1	YPL089C	SDH8	P38345	138 aa		1.89	□□□□□ -2.11
RLM1	YPL089C	IST3	P40565	148 aa	Predicted RBP	1.89	□□□□□ -2.11
RLM1	YPL089C	LYS14	P40971	790 aa		1.89	□□□□□ -2.11
RLM1	YPL089C	SKP2	P42843	763 aa		1.89	□□□□□ -2.11
RLM1	YPL089C	SAE2	P46946	345 aa		1.89	□□□□□ -2.11

Retrieved 100 of 5,963 RNA–protein pairs in 43.7 ms