RNA–Protein interactions for RNA: YOR276W

CAF20, Transcript of Phosphoprotein of the mRNA cap-binding complex, yeast

Gene CAF20, Length 486 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF20	YOR276W	MFB1	Q04922	465 aa		4.11	□□□□□ -1.75
CAF20	YOR276W	HUA2	Q12134	243 aa		4.11	□□□□□ -1.75
CAF20	YOR276W	SUT2	Q12286	268 aa		4.11	□□□□□ -1.75
CAF20	YOR276W	HSH49	Q99181	213 aa	Predicted RBP	4.11	□□□□□ -1.75
CAF20	YOR276W	URK1	P27515	501 aa		4.1	□□□□□ -1.75
CAF20	YOR276W	APL3	P38065	1025 aa		4.1	□□□□□ -1.75
CAF20	YOR276W	YBR225W	P38321	900 aa		4.1	□□□□□ -1.75
CAF20	YOR276W	SDH8	P38345	138 aa		4.1	□□□□□ -1.75
CAF20	YOR276W	PFK26	P40433	827 aa	Known RBP	4.1	□□□□□ -1.75
CAF20	YOR276W	YIL161W	P40449	235 aa	Known RBP	4.1	□□□□□ -1.75
CAF20	YOR276W	ARC1	P46672	376 aa	Known RBP	4.1	□□□□□ -1.75
CAF20	YOR276W	SGM1	P47166	707 aa		4.1	□□□□□ -1.75
CAF20	YOR276W	ASE1	P50275	885 aa		4.1	□□□□□ -1.75
CAF20	YOR276W	YIP4	P53093	235 aa		4.1	□□□□□ -1.75
CAF20	YOR276W	ARE2	P53629	642 aa	Known RBP	4.1	□□□□□ -1.75
CAF20	YOR276W	DAK1	P54838	584 aa	Known RBP	4.1	□□□□□ -1.75
CAF20	YOR276W	MTG1	Q03151	367 aa	Predicted RBP	4.1	□□□□□ -1.75
CAF20	YOR276W	TRS23	Q03784	219 aa		4.1	□□□□□ -1.75
CAF20	YOR276W	RAD30	Q04049	632 aa		4.1	□□□□□ -1.75
CAF20	YOR276W	UFO1	Q04511	668 aa		4.1	□□□□□ -1.75
CAF20	YOR276W	YPL216W	Q08964	1102 aa		4.1	□□□□□ -1.75
CAF20	YOR276W	RKI1	Q12189	258 aa		4.1	□□□□□ -1.75
CAF20	YOR276W	YER175W-A	Q8TGU4	54 aa		4.1	□□□□□ -1.75
CAF20	YOR276W	YBR126W-A	Q8TGU7	68 aa		4.1	□□□□□ -1.75
CAF20	YOR276W	RPL19A	P0CX82	189 aa	Known RBP	4.09	□□□□□ -1.75
CAF20	YOR276W	RPL19B	P0CX83	189 aa	Predicted RBP	4.09	□□□□□ -1.75
CAF20	YOR276W	FUR1	P18562	216 aa	Known RBP	4.09	□□□□□ -1.75
CAF20	YOR276W	OLE1	P21147	510 aa	Known RBP	4.09	□□□□□ -1.75
CAF20	YOR276W	SAC6	P32599	642 aa	Known RBP	4.09	□□□□□ -1.75
CAF20	YOR276W	ALY1	P36117	915 aa		4.09	□□□□□ -1.75
CAF20	YOR276W	IRC6	P43615	237 aa		4.09	□□□□□ -1.75
CAF20	YOR276W	VPS4	P52917	437 aa		4.09	□□□□□ -1.75
CAF20	YOR276W	BUD17	P53727	317 aa		4.09	□□□□□ -1.75
CAF20	YOR276W	USA1	Q03714	838 aa		4.09	□□□□□ -1.75
CAF20	YOR276W	TAF11	Q04226	346 aa		4.09	□□□□□ -1.75
CAF20	YOR276W	RCO1	Q04779	684 aa		4.09	□□□□□ -1.75
CAF20	YOR276W	YLR287C	Q05881	355 aa		4.09	□□□□□ -1.75
CAF20	YOR276W	RRG1	Q12167	365 aa	Predicted RBP	4.09	□□□□□ -1.75
CAF20	YOR276W	ERG27	Q12452	347 aa	Known RBP	4.09	□□□□□ -1.75
CAF20	YOR276W	VCX1	Q99385	411 aa		4.09	□□□□□ -1.75
CAF20	YOR276W	SEC53	P07283	254 aa	Known RBP	4.08	□□□□□ -1.76
CAF20	YOR276W	YPK1	P12688	680 aa	Known RBP	4.08	□□□□□ -1.76
CAF20	YOR276W	YCK1	P23291	538 aa		4.08	□□□□□ -1.76
CAF20	YOR276W	YBL029W	P38201	376 aa		4.08	□□□□□ -1.76
CAF20	YOR276W	TDP1	P38319	544 aa		4.08	□□□□□ -1.76
CAF20	YOR276W	CBR1	P38626	284 aa	Known RBP	4.08	□□□□□ -1.76
CAF20	YOR276W	PCL5	P38794	229 aa		4.08	□□□□□ -1.76
CAF20	YOR276W	LAM4	P38800	1345 aa		4.08	□□□□□ -1.76
CAF20	YOR276W	NPR2	P39923	615 aa		4.08	□□□□□ -1.76
CAF20	YOR276W	TPA1	P40032	644 aa	Known RBP	4.08	□□□□□ -1.76
CAF20	YOR276W	THI6	P41835	540 aa		4.08	□□□□□ -1.76
CAF20	YOR276W	DSD1	P53095	428 aa		4.08	□□□□□ -1.76
CAF20	YOR276W	YGR079W	P53249	370 aa		4.08	□□□□□ -1.76
CAF20	YOR276W	RPS15	Q01855	142 aa	Known RBP	4.08	□□□□□ -1.76
CAF20	YOR276W	SYF1	Q04048	859 aa	Predicted RBP	4.08	□□□□□ -1.76
CAF20	YOR276W	PSK2	Q08217	1101 aa		4.08	□□□□□ -1.76
CAF20	YOR276W	CIR2	Q08822	631 aa		4.08	□□□□□ -1.76
CAF20	YOR276W	NUS1	Q12063	375 aa		4.08	□□□□□ -1.76
CAF20	YOR276W	SWT1	Q12104	458 aa		4.08	□□□□□ -1.76
CAF20	YOR276W	SPO16	P17122	198 aa		4.07	□□□□□ -1.76
CAF20	YOR276W	STE4	P18851	423 aa		4.07	□□□□□ -1.76
CAF20	YOR276W	PDE1	P22434	369 aa		4.07	□□□□□ -1.76
CAF20	YOR276W	PRE8	P23639	250 aa		4.07	□□□□□ -1.76
CAF20	YOR276W	CNE1	P27825	502 aa		4.07	□□□□□ -1.76
CAF20	YOR276W	CDC5	P32562	705 aa		4.07	□□□□□ -1.76
CAF20	YOR276W	CCL1	P37366	393 aa		4.07	□□□□□ -1.76
CAF20	YOR276W	NOP4	P37838	685 aa	Known RBP	4.07	□□□□□ -1.76
CAF20	YOR276W	BUD16	P39988	312 aa		4.07	□□□□□ -1.76
CAF20	YOR276W	PMT6	P42934	759 aa		4.07	□□□□□ -1.76
CAF20	YOR276W	VPS73	P53142	486 aa	Known RBP	4.07	□□□□□ -1.76
CAF20	YOR276W	IMO32	P53219	342 aa		4.07	□□□□□ -1.76
CAF20	YOR276W	ATG4	P53867	494 aa		4.07	□□□□□ -1.76
CAF20	YOR276W	SSL2	Q00578	843 aa		4.07	□□□□□ -1.76
CAF20	YOR276W	RPT6	Q01939	405 aa	Known RBP	4.07	□□□□□ -1.76
CAF20	YOR276W	NGL3	Q03210	505 aa		4.07	□□□□□ -1.76
CAF20	YOR276W	ARP9	Q05123	467 aa		4.07	□□□□□ -1.76
CAF20	YOR276W	SCM3	Q12334	223 aa		4.07	□□□□□ -1.76
CAF20	YOR276W	YOR019W	Q99248	730 aa		4.07	□□□□□ -1.76
CAF20	YOR276W	GCN4	P03069	281 aa		4.06	□□□□□ -1.76
CAF20	YOR276W	ARG3	P05150	338 aa		4.06	□□□□□ -1.76
CAF20	YOR276W	RFA2	P26754	273 aa	Known RBP	4.06	□□□□□ -1.76
CAF20	YOR276W	PEP3	P27801	918 aa		4.06	□□□□□ -1.76
CAF20	YOR276W	GEX2	P36173	615 aa		4.06	□□□□□ -1.76
CAF20	YOR276W	YJL206C	P39529	758 aa		4.06	□□□□□ -1.76
CAF20	YOR276W	JHD1	P40034	492 aa		4.06	□□□□□ -1.76
CAF20	YOR276W	SNM1	P40993	198 aa		4.06	□□□□□ -1.76
CAF20	YOR276W	RMD8	P43620	662 aa		4.06	□□□□□ -1.76
CAF20	YOR276W	MRX6	P48564	524 aa		4.06	□□□□□ -1.76
CAF20	YOR276W	RSC1	P53236	928 aa		4.06	□□□□□ -1.76
CAF20	YOR276W	YPL071C	Q02864	156 aa		4.06	□□□□□ -1.76
CAF20	YOR276W	YML119W	Q03208	357 aa		4.06	□□□□□ -1.76
CAF20	YOR276W	FCP1	Q03254	732 aa		4.06	□□□□□ -1.76
CAF20	YOR276W	UTP21	Q06078	939 aa	Predicted RBP	4.06	□□□□□ -1.76
CAF20	YOR276W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
CAF20	YOR276W	PRS5	Q12265	496 aa	Known RBP	4.06	□□□□□ -1.76
CAF20	YOR276W	SNU66	Q12420	587 aa	Predicted RBP	4.06	□□□□□ -1.76
CAF20	YOR276W	YBR255C-A	Q3E776	120 aa		4.06	□□□□□ -1.76
CAF20	YOR276W	BNR1	P40450	1375 aa		4.05	□□□□□ -1.76
CAF20	YOR276W	MET17	P06106	444 aa		4.05	□□□□□ -1.76
CAF20	YOR276W	YML003W	P0CF16	290 aa		4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms