RNA–Protein interactions for RNA: YOL038W

PRE6, Transcript of Alpha 4 subunit of the 20S proteasome, yeastyeast

Gene PRE6, Length 765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE6YOL038W YFL064CP43540 174 aa10.81□□□□□ -0.68
PRE6YOL038W DUG1P43616 481 aaKnown RBP10.81□□□□□ -0.68
PRE6YOL038W STR3P53101 465 aaKnown RBP10.81□□□□□ -0.68
PRE6YOL038W BTN2P53286 410 aa10.81□□□□□ -0.68
PRE6YOL038W TEP1P53916 434 aa10.81□□□□□ -0.68
PRE6YOL038W TRM82Q03774 444 aa10.81□□□□□ -0.68
PRE6YOL038W YDR131CQ03899 556 aa10.81□□□□□ -0.68
PRE6YOL038W APL5Q08951 932 aaKnown RBP10.81□□□□□ -0.68
PRE6YOL038W PGC1Q08959 321 aa10.81□□□□□ -0.68
PRE6YOL038W YDR018CQ12185 396 aa10.81□□□□□ -0.68
PRE6YOL038W YBL111CQ3E7Y5 667 aa10.81□□□□□ -0.68
PRE6YOL038W SFL1P20134 766 aa10.8□□□□□ -0.68
PRE6YOL038W SLY1P22213 666 aa10.8□□□□□ -0.68
PRE6YOL038W PMI40P29952 429 aaKnown RBP10.8□□□□□ -0.68
PRE6YOL038W UTR2P32623 467 aa10.8□□□□□ -0.68
PRE6YOL038W PHO11P35842 467 aa10.8□□□□□ -0.68
PRE6YOL038W RCK2P38623 610 aa10.8□□□□□ -0.68
PRE6YOL038W PHO12P38693 467 aa10.8□□□□□ -0.68
PRE6YOL038W TIM17P39515 158 aa10.8□□□□□ -0.68
PRE6YOL038W SPC72P39723 622 aa10.8□□□□□ -0.68
PRE6YOL038W SEC9P40357 651 aa10.8□□□□□ -0.68
PRE6YOL038W CIS3P47001 227 aa10.8□□□□□ -0.68
PRE6YOL038W CSN12P47130 423 aa10.8□□□□□ -0.68
PRE6YOL038W ENT5Q03769 411 aaKnown RBP10.8□□□□□ -0.68
PRE6YOL038W TUB3P09734 445 aaKnown RBP10.79□□□□□ -0.68
PRE6YOL038W RPL1AP0CX43 217 aaKnown RBP10.79□□□□□ -0.68
PRE6YOL038W RPL1BP0CX44 217 aaKnown RBP10.79□□□□□ -0.68
PRE6YOL038W SEC23P15303 768 aaKnown RBP10.79□□□□□ -0.68
PRE6YOL038W ACO1P19414 778 aaKnown RBP RIP-Chip data10.79□□□□□ -0.68not detected
PRE6YOL038W RDS2P19541 446 aaKnown RBP10.79□□□□□ -0.68
PRE6YOL038W IST3P40565 148 aaPredicted RBP10.79□□□□□ -0.68
PRE6YOL038W TES1P41903 349 aaKnown RBP10.79□□□□□ -0.68
PRE6YOL038W OSW7P43611 510 aa10.79□□□□□ -0.68
PRE6YOL038W ROK1P45818 564 aaPredicted RBP10.79□□□□□ -0.68
PRE6YOL038W YMR178WQ03219 274 aaKnown RBP10.79□□□□□ -0.68
PRE6YOL038W YDR444WQ04093 687 aa10.79□□□□□ -0.68
PRE6YOL038W SRO7Q12038 1033 aa10.79□□□□□ -0.68
PRE6YOL038W RKM5Q12367 367 aa10.79□□□□□ -0.68
PRE6YOL038W YLR149CQ99296 730 aa10.79□□□□□ -0.68
PRE6YOL038W AI5_ALPHAQ9ZZX1 630 aa10.79□□□□□ -0.68
PRE6YOL038W SUC2P00724 532 aa10.78□□□□□ -0.68
PRE6YOL038W GAL11P19659 1081 aa10.78□□□□□ -0.68
PRE6YOL038W ERG6P25087 383 aaKnown RBP10.78□□□□□ -0.68
PRE6YOL038W ERV46P39727 415 aa10.78□□□□□ -0.68
PRE6YOL038W YAT2P40017 923 aa10.78□□□□□ -0.68
PRE6YOL038W YIL108WP40483 696 aaKnown RBP10.78□□□□□ -0.68
PRE6YOL038W NAM8Q00539 523 aaKnown RBP10.78□□□□□ -0.68
PRE6YOL038W RTT10Q08924 1013 aa10.78□□□□□ -0.68
PRE6YOL038W STT4P37297 1900 aa10.78□□□□□ -0.68
PRE6YOL038W CLN1P20437 546 aa10.77□□□□□ -0.69
PRE6YOL038W PAT1P25644 796 aaKnown RBP10.77□□□□□ -0.69
PRE6YOL038W EBP2P36049 427 aaKnown RBP10.77□□□□□ -0.69
PRE6YOL038W YKL151CP36059 337 aa10.77□□□□□ -0.69
PRE6YOL038W YBP1P38315 674 aa10.77□□□□□ -0.69
PRE6YOL038W BUD13P46947 266 aaPredicted RBP10.77□□□□□ -0.69
PRE6YOL038W COG1P53079 417 aa10.77□□□□□ -0.69
PRE6YOL038W YLL056CQ12177 298 aa10.77□□□□□ -0.69
PRE6YOL038W DSN1P40568 576 aa10.76□□□□□ -0.69
PRE6YOL038W YML6P51998 286 aa10.76□□□□□ -0.69
PRE6YOL038W SPC105P53148 917 aa10.76□□□□□ -0.69
PRE6YOL038W YDR132CQ03900 495 aa10.76□□□□□ -0.69
PRE6YOL038W NRT1Q08485 598 aa10.76□□□□□ -0.69
PRE6YOL038W YOR338WQ99326 363 aa10.76□□□□□ -0.69
PRE6YOL038W GLN4P13188 809 aaKnown RBP10.75□□□□□ -0.69
PRE6YOL038W SPT15P13393 240 aaKnown RBP10.75□□□□□ -0.69
PRE6YOL038W PMS1P14242 873 aa10.75□□□□□ -0.69
PRE6YOL038W DCC1P25559 380 aa10.75□□□□□ -0.69
PRE6YOL038W RAD5P32849 1169 aaPredicted RBP10.75□□□□□ -0.69
PRE6YOL038W PDR3P33200 976 aa10.75□□□□□ -0.69
PRE6YOL038W DIA4P38705 446 aaPredicted RBP10.75□□□□□ -0.69
PRE6YOL038W RRP3P38712 501 aaKnown RBP10.75□□□□□ -0.69
PRE6YOL038W YHL041WP38730 149 aa10.75□□□□□ -0.69
PRE6YOL038W END3P39013 349 aa10.75□□□□□ -0.69
PRE6YOL038W MND2P40577 368 aa10.75□□□□□ -0.69
PRE6YOL038W IML2P47031 731 aa10.75□□□□□ -0.69
PRE6YOL038W NRM1P53718 249 aa10.75□□□□□ -0.69
PRE6YOL038W FRE4P53746 719 aa10.75□□□□□ -0.69
PRE6YOL038W ALF1P53904 254 aa10.75□□□□□ -0.69
PRE6YOL038W PPN1Q04119 674 aa10.75□□□□□ -0.69
PRE6YOL038W YML096WQ04489 525 aa10.75□□□□□ -0.69
PRE6YOL038W AAD15Q08361 143 aa10.75□□□□□ -0.69
PRE6YOL038W AEP1P32493 518 aa10.74□□□□□ -0.69
PRE6YOL038W STO1P34160 861 aaKnown RBP10.74□□□□□ -0.69
PRE6YOL038W SIP4P46954 829 aa10.74□□□□□ -0.69
PRE6YOL038W CTK3P46963 296 aaPredicted RBP10.74□□□□□ -0.69
PRE6YOL038W SAP4P53036 818 aa10.74□□□□□ -0.69
PRE6YOL038W CTR9P89105 1077 aa10.74□□□□□ -0.69
PRE6YOL038W YMR160WQ03823 816 aa10.74□□□□□ -0.69
PRE6YOL038W TUB1P09733 447 aaKnown RBP10.73□□□□□ -0.69
PRE6YOL038W PUF4P25339 888 aaKnown RBP RIP-Chip data10.73□□□□□ -0.69not detected
PRE6YOL038W MCX1P38323 520 aaPredicted RBP10.73□□□□□ -0.69
PRE6YOL038W RGD2P43556 714 aa10.73□□□□□ -0.69
PRE6YOL038W PCL10P53124 433 aa10.73□□□□□ -0.69
PRE6YOL038W LDB18Q07887 179 aa10.73□□□□□ -0.69
PRE6YOL038W FAP7Q12055 197 aaPredicted RBP10.73□□□□□ -0.69
PRE6YOL038W SLD2P34252 453 aa10.72□□□□□ -0.69
PRE6YOL038W TFA2P36145 328 aa10.72□□□□□ -0.69
PRE6YOL038W UBP14P38237 781 aaKnown RBP10.72□□□□□ -0.69
PRE6YOL038W ECM2P38241 364 aaKnown RBP10.72□□□□□ -0.69
PRE6YOL038W LEU5P38702 357 aa10.72□□□□□ -0.69
Retrieved 100 of 5,963 RNA–protein pairs in 90.8 ms