RNA–Protein interactions for RNA: YMR012W

CLU1, Transcript of Subunit of the eukaryotic translation initiation factor 3 (eIF3), yeast

Gene CLU1, Length 3,834 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CLU1	YMR012W	LCB1	P25045	558 aa	Known RBP	1.44	□□□□□ -2.18
CLU1	YMR012W	SGF29	P25554	259 aa		1.44	□□□□□ -2.18
CLU1	YMR012W	RFA2	P26754	273 aa	Known RBP	1.44	□□□□□ -2.18
CLU1	YMR012W	TOM71	P38825	639 aa	Known RBP	1.44	□□□□□ -2.18
CLU1	YMR012W	CIR1	P42940	261 aa		1.44	□□□□□ -2.18
CLU1	YMR012W	CAF130	P53280	1122 aa	Predicted RBP	1.44	□□□□□ -2.18
CLU1	YMR012W	SPC19	Q03954	165 aa		1.44	□□□□□ -2.18
CLU1	YMR012W	STE2	D6VTK4	431 aa		1.44	□□□□□ -2.18
CLU1	YMR012W	RPS17A	P02407	136 aa	Known RBP	1.44	□□□□□ -2.18
CLU1	YMR012W	VAS1	P07806	1104 aa	Known RBP	1.44	□□□□□ -2.18
CLU1	YMR012W	PRB1	P09232	635 aa		1.44	□□□□□ -2.18
CLU1	YMR012W	RPS17B	P14127	136 aa	Known RBP	1.44	□□□□□ -2.18
CLU1	YMR012W	LOT5	P34234	306 aa		1.44	□□□□□ -2.18
CLU1	YMR012W	ALY1	P36117	915 aa		1.44	□□□□□ -2.18
CLU1	YMR012W	YBR225W	P38321	900 aa		1.44	□□□□□ -2.18
CLU1	YMR012W	GND1	P38720	489 aa	Known RBP	1.44	□□□□□ -2.18
CLU1	YMR012W	OSH7	P38755	437 aa		1.44	□□□□□ -2.18
CLU1	YMR012W	MGS1	P40151	587 aa		1.44	□□□□□ -2.18
CLU1	YMR012W	YJR061W	P40355	935 aa		1.44	□□□□□ -2.18
CLU1	YMR012W	YJL070C	P40361	888 aa		1.44	□□□□□ -2.18
CLU1	YMR012W	IRC8	P47046	822 aa		1.44	□□□□□ -2.18
CLU1	YMR012W	SUR7	P54003	302 aa		1.44	□□□□□ -2.18
CLU1	YMR012W	ORC4	P54791	529 aa		1.44	□□□□□ -2.18
CLU1	YMR012W	YSA1	Q01976	231 aa		1.44	□□□□□ -2.18
CLU1	YMR012W	YMR187C	Q03236	431 aa		1.44	□□□□□ -2.18
CLU1	YMR012W	RTN2	Q12443	393 aa		1.44	□□□□□ -2.18
CLU1	YMR012W	YPR053C	Q6Q5F3	151 aa		1.44	□□□□□ -2.18
CLU1	YMR012W	ECM29	P38737	1868 aa		1.44	□□□□□ -2.18
CLU1	YMR012W	ATP2	P00830	511 aa	Known RBP	1.44	□□□□□ -2.18
CLU1	YMR012W	KRR1	P25586	316 aa	Predicted RBP	1.44	□□□□□ -2.18
CLU1	YMR012W	IDH2	P28241	369 aa	Known RBP	1.44	□□□□□ -2.18
CLU1	YMR012W	CCR4	P31384	837 aa	Known RBP	1.44	□□□□□ -2.18
CLU1	YMR012W	GCD7	P32502	381 aa	Predicted RBP	1.44	□□□□□ -2.18
CLU1	YMR012W	FTH1	P38310	465 aa		1.44	□□□□□ -2.18
CLU1	YMR012W	RRM3	P38766	723 aa		1.44	□□□□□ -2.18
CLU1	YMR012W	ARE2	P53629	642 aa	Known RBP	1.44	□□□□□ -2.18
CLU1	YMR012W	IGO1	P53897	168 aa		1.44	□□□□□ -2.18
CLU1	YMR012W	HDA1	P53973	706 aa		1.44	□□□□□ -2.18
CLU1	YMR012W	ADA2	Q02336	434 aa		1.44	□□□□□ -2.18
CLU1	YMR012W	RMT2	Q03305	412 aa		1.44	□□□□□ -2.18
CLU1	YMR012W	YML037C	Q03703	340 aa		1.44	□□□□□ -2.18
CLU1	YMR012W	HOS1	Q12214	470 aa		1.44	□□□□□ -2.18
CLU1	YMR012W	MEX67	Q99257	599 aa	Known RBP	1.44	□□□□□ -2.18
CLU1	YMR012W	HSF1	P10961	833 aa		1.43	□□□□□ -2.18
CLU1	YMR012W	CBS1	P14066	229 aa		1.43	□□□□□ -2.18
CLU1	YMR012W	PNT1	P38969	423 aa		1.43	□□□□□ -2.18
CLU1	YMR012W	STT3	P39007	718 aa	Known RBP	1.43	□□□□□ -2.18
CLU1	YMR012W	YER010C	P40011	234 aa		1.43	□□□□□ -2.18
CLU1	YMR012W	ARB1	P40024	610 aa	Known RBP	1.43	□□□□□ -2.18
CLU1	YMR012W	KAP123	P40069	1113 aa	Known RBP	1.43	□□□□□ -2.18
CLU1	YMR012W	BIR1	P47134	954 aa		1.43	□□□□□ -2.18
CLU1	YMR012W	UPF3	P48412	387 aa	Known RBP	1.43	□□□□□ -2.18
CLU1	YMR012W	CUE3	P53137	624 aa	Known RBP	1.43	□□□□□ -2.18
CLU1	YMR012W	ALF1	P53904	254 aa		1.43	□□□□□ -2.18
CLU1	YMR012W	TRS23	Q03784	219 aa		1.43	□□□□□ -2.18
CLU1	YMR012W	PEX19	Q07418	342 aa		1.43	□□□□□ -2.18
CLU1	YMR012W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	1.43	□□□□□ -2.18	not detected
CLU1	YMR012W	REX3	Q12090	404 aa		1.43	□□□□□ -2.18
CLU1	YMR012W	CTF3	Q12748	733 aa		1.43	□□□□□ -2.18
CLU1	YMR012W	SEC3	P33332	1336 aa	Known RBP	1.43	□□□□□ -2.18
CLU1	YMR012W	URA3	P03962	267 aa		1.43	□□□□□ -2.18
CLU1	YMR012W	CHO2	P05374	869 aa	Known RBP	1.43	□□□□□ -2.18
CLU1	YMR012W	CYM1	P32898	989 aa		1.43	□□□□□ -2.18
CLU1	YMR012W	RPT3	P33298	428 aa	Known RBP	1.43	□□□□□ -2.18
CLU1	YMR012W	HEL1	P36113	551 aa		1.43	□□□□□ -2.18
CLU1	YMR012W	YBL029W	P38201	376 aa		1.43	□□□□□ -2.18
CLU1	YMR012W	ZRG8	P40021	1076 aa		1.43	□□□□□ -2.18
CLU1	YMR012W	ATF1	P40353	525 aa		1.43	□□□□□ -2.18
CLU1	YMR012W	YIL077C	P40508	320 aa		1.43	□□□□□ -2.18
CLU1	YMR012W	VTC4	P47075	721 aa		1.43	□□□□□ -2.18
CLU1	YMR012W	SRT1	Q03175	343 aa		1.43	□□□□□ -2.18
CLU1	YMR012W	PEX15	Q08215	383 aa		1.43	□□□□□ -2.18
CLU1	YMR012W	ATP4	P05626	244 aa		1.43	□□□□□ -2.18
CLU1	YMR012W	SEC53	P07283	254 aa	Known RBP	1.43	□□□□□ -2.18
CLU1	YMR012W	RPC31	P17890	251 aa		1.43	□□□□□ -2.18
CLU1	YMR012W	ERG8	P24521	451 aa		1.43	□□□□□ -2.18
CLU1	YMR012W	TIF5	P38431	405 aa	Known RBP	1.43	□□□□□ -2.18
CLU1	YMR012W	APE4	P38821	490 aa		1.43	□□□□□ -2.18
CLU1	YMR012W	SHU2	P38957	223 aa		1.43	□□□□□ -2.18
CLU1	YMR012W	FLC2	P39719	783 aa		1.43	□□□□□ -2.18
CLU1	YMR012W	PZF1	P39933	429 aa		1.43	□□□□□ -2.18
CLU1	YMR012W	LRO1	P40345	661 aa		1.43	□□□□□ -2.18
CLU1	YMR012W	CAB2	P40506	365 aa		1.43	□□□□□ -2.18
CLU1	YMR012W	EPL1	P43572	832 aa		1.43	□□□□□ -2.18
CLU1	YMR012W	HNT2	P49775	206 aa		1.43	□□□□□ -2.18
CLU1	YMR012W	MCA1	Q08601	432 aa		1.43	□□□□□ -2.18
CLU1	YMR012W	PGA3	Q12746	312 aa	Known RBP	1.43	□□□□□ -2.18
CLU1	YMR012W	LEU2	P04173	364 aa	Predicted RBP	1.42	□□□□□ -2.18
CLU1	YMR012W	RPC53	P25441	422 aa		1.42	□□□□□ -2.18
CLU1	YMR012W	LNP1	P38878	278 aa		1.42	□□□□□ -2.18
CLU1	YMR012W	YEL057C	P39983	233 aa		1.42	□□□□□ -2.18
CLU1	YMR012W	SPO22	P40511	975 aa		1.42	□□□□□ -2.18
CLU1	YMR012W	YHC3	P47040	408 aa		1.42	□□□□□ -2.18
CLU1	YMR012W	CWC22	P53333	577 aa	Known RBP	1.42	□□□□□ -2.18
CLU1	YMR012W	SPO1	P53541	631 aa		1.42	□□□□□ -2.18
CLU1	YMR012W	DUG3	P53871	357 aa		1.42	□□□□□ -2.18
CLU1	YMR012W	CUZ1	P53899	274 aa		1.42	□□□□□ -2.18
CLU1	YMR012W	RSF1	Q05043	376 aa		1.42	□□□□□ -2.18
CLU1	YMR012W	THI22	Q06490	572 aa		1.42	□□□□□ -2.18
CLU1	YMR012W	MDM38	Q08179	573 aa		1.42	□□□□□ -2.18

Retrieved 100 of 5,963 RNA–protein pairs in 17 ms