RNA–Protein interactions for RNA: YLR397C

AFG2, Transcript of ATPase of the CDC48/PAS1/SEC18 (AAA) family, forms a hexameric complex, yeastyeast

Gene AFG2, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFG2YLR397C ERG10P41338 398 aaKnown RBP7.41□□□□□ -1.22
AFG2YLR397C YML131WQ03102 365 aa7.41□□□□□ -1.22
AFG2YLR397C UTP14Q04500 899 aaKnown RBP7.41□□□□□ -1.22
AFG2YLR397C IWR1Q07532 353 aaPredicted RBP7.41□□□□□ -1.22
AFG2YLR397C AIM41Q12032 185 aa7.41□□□□□ -1.22
AFG2YLR397C ADR1P07248 1323 aa7.41□□□□□ -1.22
AFG2YLR397C THS1P04801 734 aaKnown RBP7.41□□□□□ -1.22
AFG2YLR397C PBS2P08018 668 aa7.41□□□□□ -1.22
AFG2YLR397C MRP2P10663 115 aaPredicted RBP7.41□□□□□ -1.22
AFG2YLR397C KTR1P27810 393 aaKnown RBP7.41□□□□□ -1.22
AFG2YLR397C CCR4P31384 837 aaKnown RBP7.41□□□□□ -1.22
AFG2YLR397C ASF2P32448 525 aaPredicted RBP7.41□□□□□ -1.22
AFG2YLR397C AKL1P38080 1108 aaKnown RBP7.41□□□□□ -1.22
AFG2YLR397C LEU5P38702 357 aa7.41□□□□□ -1.22
AFG2YLR397C YHR078WP38799 552 aa7.41□□□□□ -1.22
AFG2YLR397C RRP8P38961 392 aaKnown RBP7.41□□□□□ -1.22
AFG2YLR397C SEC28P40509 296 aaKnown RBP7.41□□□□□ -1.22
AFG2YLR397C TIR3P40552 269 aa7.41□□□□□ -1.22
AFG2YLR397C ALR2P43553 858 aa7.41□□□□□ -1.22
AFG2YLR397C YJL049WP47048 450 aa7.41□□□□□ -1.22
AFG2YLR397C YNL115CP53925 644 aa7.41□□□□□ -1.22
AFG2YLR397C COG5P53951 403 aa7.41□□□□□ -1.22
AFG2YLR397C HAS1Q03532 505 aaKnown RBP7.41□□□□□ -1.22
AFG2YLR397C SEC7P11075 2009 aaKnown RBP7.41□□□□□ -1.22
AFG2YLR397C PRP5P21372 849 aaPredicted RBP7.4□□□□□ -1.22
AFG2YLR397C HXT1P32465 570 aa7.4□□□□□ -1.22
AFG2YLR397C PET127P32606 800 aa7.4□□□□□ -1.22
AFG2YLR397C PDR3P33200 976 aa7.4□□□□□ -1.22
AFG2YLR397C ECM2P38241 364 aaKnown RBP7.4□□□□□ -1.22
AFG2YLR397C MSS4P38994 779 aa7.4□□□□□ -1.22
AFG2YLR397C MNN9P39107 395 aaKnown RBP7.4□□□□□ -1.22
AFG2YLR397C IRC5P43610 853 aa7.4□□□□□ -1.22
AFG2YLR397C EMC2P47133 292 aaKnown RBP7.4□□□□□ -1.22
AFG2YLR397C YJR141WP47172 347 aaPredicted RBP7.4□□□□□ -1.22
AFG2YLR397C YGL108CP53139 140 aa7.4□□□□□ -1.22
AFG2YLR397C YGR026WP53217 278 aa7.4□□□□□ -1.22
AFG2YLR397C NIS1P53939 407 aa7.4□□□□□ -1.22
AFG2YLR397C ARP10Q04549 284 aa7.4□□□□□ -1.22
AFG2YLR397C PEX10Q05568 337 aa7.4□□□□□ -1.22
AFG2YLR397C GMC2Q06201 188 aa7.4□□□□□ -1.22
AFG2YLR397C YLL032CQ07834 825 aaKnown RBP RIP-Chip data7.4□□□□□ -1.22not detected
AFG2YLR397C LOT6Q07923 191 aa7.4□□□□□ -1.22
AFG2YLR397C ENT1Q12518 454 aa7.4□□□□□ -1.22
AFG2YLR397C ATG11Q12527 1178 aa7.4□□□□□ -1.22
AFG2YLR397C CDC6P09119 513 aa7.4□□□□□ -1.23
AFG2YLR397C DMC1P25453 334 aa7.4□□□□□ -1.23
AFG2YLR397C PTP2P29461 750 aa7.4□□□□□ -1.23
AFG2YLR397C SAC1P32368 623 aaKnown RBP7.4□□□□□ -1.23
AFG2YLR397C NTH2P35172 780 aa7.4□□□□□ -1.23
AFG2YLR397C MXR1P40029 184 aa7.4□□□□□ -1.23
AFG2YLR397C CAF16P43569 289 aa7.4□□□□□ -1.23
AFG2YLR397C LSM1P47017 172 aaKnown RBP7.4□□□□□ -1.23
AFG2YLR397C YMR279CQ03263 540 aa7.4□□□□□ -1.23
AFG2YLR397C GYP1Q08484 637 aa7.4□□□□□ -1.23
AFG2YLR397C SKI7Q08491 747 aaPredicted RBP7.4□□□□□ -1.23
AFG2YLR397C DGK1Q12382 290 aa7.4□□□□□ -1.23
AFG2YLR397C PDC5P16467 563 aaKnown RBP7.39□□□□□ -1.23
AFG2YLR397C SNT1P25357 1226 aa7.39□□□□□ -1.23
AFG2YLR397C YCR101CP25607 182 aa7.39□□□□□ -1.23
AFG2YLR397C NUP2P32499 720 aa7.39□□□□□ -1.23
AFG2YLR397C RFC2P40348 353 aa7.39□□□□□ -1.23
AFG2YLR397C DIM1P41819 318 aaKnown RBP7.39□□□□□ -1.23
AFG2YLR397C RTT101P47050 842 aa7.39□□□□□ -1.23
AFG2YLR397C RPS12P48589 143 aaKnown RBP7.39□□□□□ -1.23
AFG2YLR397C MUK1Q02866 612 aa7.39□□□□□ -1.23
AFG2YLR397C IRC4Q03036 179 aa7.39□□□□□ -1.23
AFG2YLR397C SPH1Q06160 661 aa7.39□□□□□ -1.23
AFG2YLR397C REH1Q06709 432 aa7.39□□□□□ -1.23
AFG2YLR397C SPO75Q07798 868 aa7.39□□□□□ -1.23
AFG2YLR397C WRS1Q12109 432 aaKnown RBP7.39□□□□□ -1.23
AFG2YLR397C NSI1Q12457 570 aa7.39□□□□□ -1.23
AFG2YLR397C RPP1AP05318 106 aaPredicted RBP7.39□□□□□ -1.23
AFG2YLR397C DIT2P21595 489 aa7.39□□□□□ -1.23
AFG2YLR397C PEX2P32800 271 aa7.39□□□□□ -1.23
AFG2YLR397C MCM7P38132 845 aa7.39□□□□□ -1.23
AFG2YLR397C BCD1P38772 366 aa7.39□□□□□ -1.23
AFG2YLR397C AIM2P39721 246 aa7.39□□□□□ -1.23
AFG2YLR397C PFK26P40433 827 aaKnown RBP7.39□□□□□ -1.23
AFG2YLR397C YIL055CP40523 627 aaKnown RBP7.39□□□□□ -1.23
AFG2YLR397C CCT7P42943 550 aaKnown RBP7.39□□□□□ -1.23
AFG2YLR397C MRK1P50873 501 aa7.39□□□□□ -1.23
AFG2YLR397C FOL2P51601 243 aaKnown RBP7.39□□□□□ -1.23
AFG2YLR397C YGL117WP53133 265 aa7.39□□□□□ -1.23
AFG2YLR397C ZDS2P54786 942 aa7.39□□□□□ -1.23
AFG2YLR397C NPL3Q01560 414 aaKnown RBP RIP-Chip data7.39□□□□□ -1.23not detected
AFG2YLR397C IVY1Q04934 453 aa7.39□□□□□ -1.23
AFG2YLR397C COQ9Q05779 260 aa7.39□□□□□ -1.23
AFG2YLR397C DUS3Q06053 668 aaKnown RBP7.39□□□□□ -1.23
AFG2YLR397C SPO77Q06134 477 aa7.39□□□□□ -1.23
AFG2YLR397C YLR352WQ06479 807 aa7.39□□□□□ -1.23
AFG2YLR397C GPN3Q06543 272 aa7.39□□□□□ -1.23
AFG2YLR397C YPR196WQ06595 470 aa7.39□□□□□ -1.23
AFG2YLR397C SWA2Q06677 668 aa7.39□□□□□ -1.23
AFG2YLR397C YAP7Q08182 245 aa7.39□□□□□ -1.23
AFG2YLR397C FRE3Q08905 711 aa7.39□□□□□ -1.23
AFG2YLR397C GLO4Q12320 285 aa7.39□□□□□ -1.23
AFG2YLR397C LDB17Q12342 491 aa7.39□□□□□ -1.23
AFG2YLR397C TRP2P00899 507 aaKnown RBP7.38□□□□□ -1.23
AFG2YLR397C SCEIP03882 235 aa7.38□□□□□ -1.23
AFG2YLR397C MRPL8P22353 238 aa7.38□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 26.6 ms