RNA–Protein interactions for RNA: YLR276C

DBP9, Transcript of DEAD-box protein required for 27S rRNA processing, yeast

Gene DBP9, Length 1,785 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBP9	YLR276C	NMD3	P38861	518 aa	Known RBP	5.85	□□□□□ -1.47
DBP9	YLR276C	CCT2	P39076	527 aa	Known RBP	5.85	□□□□□ -1.47
DBP9	YLR276C	PCF11	P39081	626 aa	Predicted RBP	5.85	□□□□□ -1.47
DBP9	YLR276C	PDS1	P40316	373 aa	Predicted RBP	5.85	□□□□□ -1.47
DBP9	YLR276C	SHQ1	P40486	507 aa	Predicted RBP	5.85	□□□□□ -1.47
DBP9	YLR276C	PHB1	P40961	287 aa		5.85	□□□□□ -1.47
DBP9	YLR276C	SSN8	P47821	323 aa		5.85	□□□□□ -1.47
DBP9	YLR276C	PUS4	P48567	403 aa	Known RBP	5.85	□□□□□ -1.47
DBP9	YLR276C	DSD1	P53095	428 aa		5.85	□□□□□ -1.47
DBP9	YLR276C	DCP2	P53550	970 aa	Known RBP	5.85	□□□□□ -1.47
DBP9	YLR276C	NOG2	P53742	486 aa	Known RBP	5.85	□□□□□ -1.47
DBP9	YLR276C	SLU7	Q02775	382 aa	Known RBP	5.85	□□□□□ -1.47
DBP9	YLR276C	PNG1	Q02890	363 aa		5.85	□□□□□ -1.47
DBP9	YLR276C	BLS1	Q06071	122 aa		5.85	□□□□□ -1.47
DBP9	YLR276C	SMD2	Q06217	110 aa	Known RBP	5.85	□□□□□ -1.47
DBP9	YLR276C	APC5	Q08683	685 aa		5.85	□□□□□ -1.47
DBP9	YLR276C	UIP4	Q08926	304 aa		5.85	□□□□□ -1.47
DBP9	YLR276C	TY1A-BL	Q12266	440 aa		5.85	□□□□□ -1.47
DBP9	YLR276C	HSP42	Q12329	375 aa		5.85	□□□□□ -1.47
DBP9	YLR276C	MTF2	P10849	440 aa		5.85	□□□□□ -1.47
DBP9	YLR276C	MSB1	P21339	1137 aa	Known RBP	5.85	□□□□□ -1.47
DBP9	YLR276C	YCR016W	P25617	290 aa	Known RBP	5.85	□□□□□ -1.47
DBP9	YLR276C	HXT3	P32466	567 aa	Known RBP	5.85	□□□□□ -1.47
DBP9	YLR276C	BMH2	P34730	273 aa	Known RBP	5.85	□□□□□ -1.47
DBP9	YLR276C	PEX5	P35056	612 aa		5.85	□□□□□ -1.47
DBP9	YLR276C	VPS21	P36017	210 aa	Known RBP	5.85	□□□□□ -1.47
DBP9	YLR276C	RRN3	P36070	627 aa		5.85	□□□□□ -1.47
DBP9	YLR276C	NPT1	P39683	429 aa	Known RBP	5.85	□□□□□ -1.47
DBP9	YLR276C	MET12	P46151	657 aa		5.85	□□□□□ -1.47
DBP9	YLR276C	YJR054W	P47114	497 aa		5.85	□□□□□ -1.47
DBP9	YLR276C	ASK10	P48361	1146 aa		5.85	□□□□□ -1.47
DBP9	YLR276C	GCV2	P49095	1034 aa		5.85	□□□□□ -1.47
DBP9	YLR276C	TAF12	Q03761	539 aa		5.85	□□□□□ -1.47
DBP9	YLR276C	ECM11	Q04110	302 aa		5.85	□□□□□ -1.47
DBP9	YLR276C	GIS4	Q04233	774 aa		5.85	□□□□□ -1.47
DBP9	YLR276C	TAP42	Q04372	366 aa		5.85	□□□□□ -1.47
DBP9	YLR276C	ATP16	Q12165	160 aa		5.85	□□□□□ -1.47
DBP9	YLR276C	ACF2	Q12168	779 aa		5.85	□□□□□ -1.47
DBP9	YLR276C	RSF2	P46974	1380 aa		5.84	□□□□□ -1.47
DBP9	YLR276C	RPL24A	P04449	155 aa	Known RBP	5.84	□□□□□ -1.47
DBP9	YLR276C	NMT1	P14743	455 aa		5.84	□□□□□ -1.47
DBP9	YLR276C	VMA2	P16140	517 aa	Known RBP	5.84	□□□□□ -1.47
DBP9	YLR276C	OCA4	P25366	362 aa		5.84	□□□□□ -1.47
DBP9	YLR276C	RER1	P25560	188 aa		5.84	□□□□□ -1.47
DBP9	YLR276C	YJU2	P28320	278 aa	Predicted RBP	5.84	□□□□□ -1.47
DBP9	YLR276C	FUN30	P31380	1131 aa		5.84	□□□□□ -1.47
DBP9	YLR276C	RAD24	P32641	659 aa		5.84	□□□□□ -1.47
DBP9	YLR276C	YSC84	P32793	468 aa		5.84	□□□□□ -1.47
DBP9	YLR276C	AST1	P35183	429 aa		5.84	□□□□□ -1.47
DBP9	YLR276C	NNK1	P36003	928 aa		5.84	□□□□□ -1.47
DBP9	YLR276C	TMN3	P40071	706 aa		5.84	□□□□□ -1.47
DBP9	YLR276C	AVT6	P40074	448 aa		5.84	□□□□□ -1.47
DBP9	YLR276C	FTR1	P40088	404 aa		5.84	□□□□□ -1.47
DBP9	YLR276C	RIC1	P40395	1056 aa		5.84	□□□□□ -1.47
DBP9	YLR276C	SPO22	P40511	975 aa		5.84	□□□□□ -1.47
DBP9	YLR276C	SNL1	P40548	159 aa		5.84	□□□□□ -1.47
DBP9	YLR276C	YNL040W	P53960	456 aa	Predicted RBP	5.84	□□□□□ -1.47
DBP9	YLR276C	VTI1	Q04338	217 aa		5.84	□□□□□ -1.47
DBP9	YLR276C	NNT1	Q05874	261 aa		5.84	□□□□□ -1.47
DBP9	YLR276C	YLR287C	Q05881	355 aa		5.84	□□□□□ -1.47
DBP9	YLR276C	SYO1	Q07395	620 aa		5.84	□□□□□ -1.47
DBP9	YLR276C	TUS1	Q06412	1307 aa		5.83	□□□□□ -1.48
DBP9	YLR276C	RPB2	P08518	1224 aa	Known RBP	5.83	□□□□□ -1.48
DBP9	YLR276C	SAC7	P17121	654 aa		5.83	□□□□□ -1.48
DBP9	YLR276C	SPO12	P17123	173 aa		5.83	□□□□□ -1.48
DBP9	YLR276C	CLB2	P24869	491 aa		5.83	□□□□□ -1.48
DBP9	YLR276C	SPS22	P25380	463 aa		5.83	□□□□□ -1.48
DBP9	YLR276C	URA1	P28272	314 aa	Predicted RBP	5.83	□□□□□ -1.48
DBP9	YLR276C	CYS3	P31373	394 aa	Known RBP	5.83	□□□□□ -1.48
DBP9	YLR276C	ACH1	P32316	526 aa		5.83	□□□□□ -1.48
DBP9	YLR276C	SSE1	P32589	693 aa	Known RBP	5.83	□□□□□ -1.48
DBP9	YLR276C	GCG1	P32656	232 aa	Known RBP	5.83	□□□□□ -1.48
DBP9	YLR276C	UBC6	P33296	250 aa	Predicted RBP	5.83	□□□□□ -1.48
DBP9	YLR276C	GLY1	P37303	387 aa	Known RBP	5.83	□□□□□ -1.48
DBP9	YLR276C	ADE17	P38009	592 aa	Known RBP	5.83	□□□□□ -1.48
DBP9	YLR276C	YHL017W	P38745	532 aa		5.83	□□□□□ -1.48
DBP9	YLR276C	NOP9	P47077	666 aa	Known RBP	5.83	□□□□□ -1.48
DBP9	YLR276C	URB2	P47108	1174 aa		5.83	□□□□□ -1.48
DBP9	YLR276C	BNA2	P47125	453 aa		5.83	□□□□□ -1.48
DBP9	YLR276C	COS6	P53344	381 aa		5.83	□□□□□ -1.48
DBP9	YLR276C	DOT1	Q04089	582 aa	Known RBP	5.83	□□□□□ -1.48
DBP9	YLR276C	RCL1	Q08096	367 aa	Predicted RBP	5.83	□□□□□ -1.48
DBP9	YLR276C	HRK1	Q08732	759 aa	Known RBP	5.83	□□□□□ -1.48
DBP9	YLR276C	AFT2	Q08957	416 aa		5.83	□□□□□ -1.48
DBP9	YLR276C	NCA2	Q12374	616 aa		5.83	□□□□□ -1.48
DBP9	YLR276C	CEX1	Q12453	761 aa		5.83	□□□□□ -1.48
DBP9	YLR276C	Q0142	Q9ZZW4	58 aa		5.83	□□□□□ -1.48
DBP9	YLR276C	POL30	P15873	258 aa	Known RBP	5.83	□□□□□ -1.48
DBP9	YLR276C	YAP1	P19880	650 aa	Known RBP	5.83	□□□□□ -1.48
DBP9	YLR276C	CKI1	P20485	582 aa		5.83	□□□□□ -1.48
DBP9	YLR276C	URE2	P23202	354 aa	Known RBP	5.83	□□□□□ -1.48
DBP9	YLR276C	SRB4	P32569	687 aa		5.83	□□□□□ -1.48
DBP9	YLR276C	RPH1	P39956	796 aa		5.83	□□□□□ -1.48
DBP9	YLR276C	UPF3	P48412	387 aa	Known RBP	5.83	□□□□□ -1.48
DBP9	YLR276C	ARC35	P53731	342 aa	Known RBP	5.83	□□□□□ -1.48
DBP9	YLR276C	HDA1	P53973	706 aa		5.83	□□□□□ -1.48
DBP9	YLR276C	MMT1	Q03218	510 aa		5.83	□□□□□ -1.48
DBP9	YLR276C	YMR018W	Q04364	514 aa		5.83	□□□□□ -1.48
DBP9	YLR276C	SEC10	Q06245	871 aa		5.83	□□□□□ -1.48
DBP9	YLR276C	VIP1	Q06685	1146 aa	Known RBP	5.83	□□□□□ -1.48

Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms