RNA–Protein interactions for RNA: YLR272C

YCS4, Transcript of Subunit of the condensin complex, yeast

Gene YCS4, Length 3,531 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YCS4	YLR272C	MEF2	P39677	819 aa		1.56	□□□□□ -2.16
YCS4	YLR272C	ASI2	P53895	289 aa		1.56	□□□□□ -2.16
YCS4	YLR272C	EMI2	Q04409	500 aa	Known RBP	1.56	□□□□□ -2.16
YCS4	YLR272C	FMP45	Q07651	309 aa		1.56	□□□□□ -2.16
YCS4	YLR272C	LAM4	P38800	1345 aa		1.56	□□□□□ -2.16
YCS4	YLR272C	GSH1	P32477	678 aa		1.56	□□□□□ -2.16
YCS4	YLR272C	YKR073C	P36153	106 aa		1.56	□□□□□ -2.16
YCS4	YLR272C	CRG1	P38892	291 aa	RIP-Chip data	1.56	□□□□□ -2.16	not detected
YCS4	YLR272C	FTR1	P40088	404 aa		1.56	□□□□□ -2.16
YCS4	YLR272C	HOS4	P40480	1083 aa		1.56	□□□□□ -2.16
YCS4	YLR272C	SEC24	P40482	926 aa	Known RBP	1.56	□□□□□ -2.16
YCS4	YLR272C	YIR042C	P40586	236 aa		1.56	□□□□□ -2.16
YCS4	YLR272C	NOP9	P47077	666 aa	Known RBP	1.56	□□□□□ -2.16
YCS4	YLR272C	RRT6	P53117	311 aa	Predicted RBP	1.56	□□□□□ -2.16
YCS4	YLR272C	MAK10	Q02197	733 aa		1.56	□□□□□ -2.16
YCS4	YLR272C	HXK2	P04807	486 aa	Known RBP	1.55	□□□□□ -2.16
YCS4	YLR272C	MSS18	P08593	268 aa		1.55	□□□□□ -2.16
YCS4	YLR272C	MDL1	P33310	695 aa		1.55	□□□□□ -2.16
YCS4	YLR272C	YHR054C	P38780	354 aa		1.55	□□□□□ -2.16
YCS4	YLR272C	FLC2	P39719	783 aa		1.55	□□□□□ -2.16
YCS4	YLR272C	YER010C	P40011	234 aa		1.55	□□□□□ -2.16
YCS4	YLR272C	VID30	P53076	958 aa		1.55	□□□□□ -2.16
YCS4	YLR272C	COG2	P53271	262 aa		1.55	□□□□□ -2.16
YCS4	YLR272C	ARC35	P53731	342 aa	Known RBP	1.55	□□□□□ -2.16
YCS4	YLR272C	YNR071C	P53757	342 aa		1.55	□□□□□ -2.16
YCS4	YLR272C	APM1	Q00776	475 aa	Predicted RBP	1.55	□□□□□ -2.16
YCS4	YLR272C	GSF2	Q04697	403 aa	Known RBP	1.55	□□□□□ -2.16
YCS4	YLR272C	OPY2	Q06810	360 aa		1.55	□□□□□ -2.16
YCS4	YLR272C	NRT1	Q08485	598 aa		1.55	□□□□□ -2.16
YCS4	YLR272C	APL4	Q12028	832 aa		1.55	□□□□□ -2.16
YCS4	YLR272C	SPO11	P23179	398 aa		1.55	□□□□□ -2.16
YCS4	YLR272C	ECM25	P32525	599 aa		1.55	□□□□□ -2.16
YCS4	YLR272C	SFA1	P32771	386 aa		1.55	□□□□□ -2.16
YCS4	YLR272C	MUP3	P38734	546 aa		1.55	□□□□□ -2.16
YCS4	YLR272C	GIP4	P39732	760 aa		1.55	□□□□□ -2.16
YCS4	YLR272C	YJL068C	P40363	299 aa		1.55	□□□□□ -2.16
YCS4	YLR272C	EPL1	P43572	832 aa		1.55	□□□□□ -2.16
YCS4	YLR272C	PHO23	P50947	330 aa		1.55	□□□□□ -2.16
YCS4	YLR272C	NGL3	Q03210	505 aa		1.55	□□□□□ -2.16
YCS4	YLR272C	HLR1	Q04429	423 aa		1.55	□□□□□ -2.16
YCS4	YLR272C	YFT2	Q06676	274 aa		1.55	□□□□□ -2.16
YCS4	YLR272C	DFG16	Q99234	619 aa		1.55	□□□□□ -2.16
YCS4	YLR272C	YMR085W	P0CF18	432 aa		1.54	□□□□□ -2.16
YCS4	YLR272C	UBC1	P21734	215 aa	Known RBP	1.54	□□□□□ -2.16
YCS4	YLR272C	KAR4	P25583	335 aa		1.54	□□□□□ -2.16
YCS4	YLR272C	MCM4	P30665	933 aa	Known RBP	1.54	□□□□□ -2.16
YCS4	YLR272C	RXT2	P38255	430 aa		1.54	□□□□□ -2.16
YCS4	YLR272C	MIP6	P38760	659 aa	Known RBP	1.54	□□□□□ -2.16
YCS4	YLR272C	FSH1	P38777	243 aa	Known RBP	1.54	□□□□□ -2.16
YCS4	YLR272C	FLO5	P38894	1075 aa		1.54	□□□□□ -2.16
YCS4	YLR272C	ESL1	P40456	1118 aa		1.54	□□□□□ -2.16
YCS4	YLR272C	YSA1	Q01976	231 aa		1.54	□□□□□ -2.16
YCS4	YLR272C	MTG1	Q03151	367 aa	Predicted RBP	1.54	□□□□□ -2.16
YCS4	YLR272C	TRS31	Q03337	283 aa		1.54	□□□□□ -2.16
YCS4	YLR272C	HEL2	Q05580	639 aa	Known RBP	1.54	□□□□□ -2.16
YCS4	YLR272C	BRE4	Q07660	1125 aa		1.54	□□□□□ -2.16
YCS4	YLR272C	UPC2	Q12151	913 aa		1.54	□□□□□ -2.16
YCS4	YLR272C	CDC31	P06704	161 aa	Known RBP	1.54	□□□□□ -2.16
YCS4	YLR272C	HIS5	P07172	385 aa		1.54	□□□□□ -2.16
YCS4	YLR272C	ALG7	P07286	448 aa		1.54	□□□□□ -2.16
YCS4	YLR272C	MET8	P15807	274 aa		1.54	□□□□□ -2.16
YCS4	YLR272C	MMS4	P38257	691 aa		1.54	□□□□□ -2.16
YCS4	YLR272C	TIF5	P38431	405 aa	Known RBP	1.54	□□□□□ -2.16
YCS4	YLR272C	ANS1	P38832	159 aa		1.54	□□□□□ -2.16
YCS4	YLR272C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	1.54	□□□□□ -2.16	not detected
YCS4	YLR272C	GET2	P40056	285 aa		1.54	□□□□□ -2.16
YCS4	YLR272C	ATF1	P40353	525 aa		1.54	□□□□□ -2.16
YCS4	YLR272C	YJL107C	P42947	387 aa		1.54	□□□□□ -2.16
YCS4	YLR272C	AVT1	P47082	602 aa		1.54	□□□□□ -2.16
YCS4	YLR272C	TEL2	P53038	688 aa		1.54	□□□□□ -2.16
YCS4	YLR272C	MTC3	P53077	123 aa		1.54	□□□□□ -2.16
YCS4	YLR272C	NSE5	Q03718	556 aa		1.54	□□□□□ -2.16
YCS4	YLR272C	YDR341C	Q05506	607 aa	Known RBP	1.54	□□□□□ -2.16
YCS4	YLR272C	ORM2	Q06144	216 aa		1.54	□□□□□ -2.16
YCS4	YLR272C	SWA2	Q06677	668 aa		1.54	□□□□□ -2.16
YCS4	YLR272C	SWT1	Q12104	458 aa		1.54	□□□□□ -2.16
YCS4	YLR272C	HRP1	Q99383	534 aa	Known RBP	1.54	□□□□□ -2.16
YCS4	YLR272C	FUM1	P08417	488 aa	Known RBP	1.54	□□□□□ -2.16
YCS4	YLR272C	GAL7	P08431	366 aa		1.54	□□□□□ -2.16
YCS4	YLR272C	PDA1	P16387	420 aa	Known RBP	1.54	□□□□□ -2.16
YCS4	YLR272C	RPB8	P20436	146 aa		1.54	□□□□□ -2.16
YCS4	YLR272C	PDE1	P22434	369 aa		1.54	□□□□□ -2.16
YCS4	YLR272C	RRP43	P25359	394 aa	Predicted RBP	1.54	□□□□□ -2.16
YCS4	YLR272C	AFG1	P32317	509 aa		1.54	□□□□□ -2.16
YCS4	YLR272C	DHR2	P36009	735 aa	Predicted RBP	1.54	□□□□□ -2.16
YCS4	YLR272C	ADE17	P38009	592 aa	Known RBP	1.54	□□□□□ -2.16
YCS4	YLR272C	ELO3	P40319	345 aa		1.54	□□□□□ -2.16
YCS4	YLR272C	PKP1	P40530	394 aa		1.54	□□□□□ -2.16
YCS4	YLR272C	YIP5	P53108	310 aa		1.54	□□□□□ -2.16
YCS4	YLR272C	SGF73	P53165	657 aa		1.54	□□□□□ -2.16
YCS4	YLR272C	WAR1	Q03631	944 aa		1.54	□□□□□ -2.16
YCS4	YLR272C	YSH1	Q06224	779 aa	Predicted RBP	1.54	□□□□□ -2.16
YCS4	YLR272C	SPN1	Q06505	410 aa	Predicted RBP	1.54	□□□□□ -2.16
YCS4	YLR272C	IMH1	Q06704	911 aa	Known RBP	1.54	□□□□□ -2.16
YCS4	YLR272C	AAD4	Q07747	329 aa		1.54	□□□□□ -2.16
YCS4	YLR272C	BUD7	Q08754	746 aa		1.54	□□□□□ -2.16
YCS4	YLR272C	THI21	Q08975	551 aa		1.54	□□□□□ -2.16
YCS4	YLR272C	CLN1	P20437	546 aa		1.53	□□□□□ -2.16
YCS4	YLR272C	GCS1	P35197	352 aa		1.53	□□□□□ -2.16
YCS4	YLR272C	FMO1	P38866	432 aa		1.53	□□□□□ -2.16

Retrieved 100 of 5,963 RNA–protein pairs in 52.3 ms