RNA–Protein interactions for RNA: YLR087C

CSF1, Transcript of Protein required for fermentation at low temperature, yeastyeast

Gene CSF1, Length 8,877 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSF1YLR087C SIP1P32578 815 aa2.36□□□□□ -2.03
CSF1YLR087C TED1P40533 473 aa2.36□□□□□ -2.03
CSF1YLR087C YJR039WP47107 1121 aa2.36□□□□□ -2.03
CSF1YLR087C CPR6P53691 371 aaKnown RBP2.36□□□□□ -2.03
CSF1YLR087C RPM2Q02773 1202 aa2.36□□□□□ -2.03
CSF1YLR087C SML1Q04964 104 aa2.36□□□□□ -2.03
CSF1YLR087C VPS38Q05919 439 aa2.36□□□□□ -2.03
CSF1YLR087C RPL8AP17076 256 aaKnown RBP2.35□□□□□ -2.03
CSF1YLR087C RPL8BP29453 256 aaKnown RBP2.35□□□□□ -2.03
CSF1YLR087C YBL036CP38197 257 aa2.35□□□□□ -2.03
CSF1YLR087C RTC3P38804 111 aaPredicted RBP2.35□□□□□ -2.03
CSF1YLR087C EMW1P42842 904 aaKnown RBP2.35□□□□□ -2.03
CSF1YLR087C YGR237CP50089 785 aa2.35□□□□□ -2.03
CSF1YLR087C RMT2Q03305 412 aa2.35□□□□□ -2.03
CSF1YLR087C ARX1Q03862 593 aaKnown RBP2.35□□□□□ -2.03
CSF1YLR087C VTA1Q06263 330 aa2.35□□□□□ -2.03
CSF1YLR087C ARV1Q06541 321 aa2.35□□□□□ -2.03
CSF1YLR087C YDR056CQ12025 205 aa2.35□□□□□ -2.03
CSF1YLR087C SPO21Q12411 609 aa2.35□□□□□ -2.03
CSF1YLR087C UBC1P21734 215 aaKnown RBP2.35□□□□□ -2.03
CSF1YLR087C POF1P25576 258 aa2.35□□□□□ -2.03
CSF1YLR087C PTP2P29461 750 aa2.35□□□□□ -2.03
CSF1YLR087C ECM25P32525 599 aa2.35□□□□□ -2.03
CSF1YLR087C REC114P32841 428 aa2.35□□□□□ -2.03
CSF1YLR087C ECM2P38241 364 aaKnown RBP2.35□□□□□ -2.03
CSF1YLR087C RPH1P39956 796 aa2.35□□□□□ -2.03
CSF1YLR087C GDI1P39958 451 aaKnown RBP2.35□□□□□ -2.03
CSF1YLR087C TDA10P42938 290 aa2.35□□□□□ -2.03
CSF1YLR087C CIR1P42940 261 aa2.35□□□□□ -2.03
CSF1YLR087C JJJ2P46997 583 aa2.35□□□□□ -2.03
CSF1YLR087C RIM21P48565 533 aa2.35□□□□□ -2.03
CSF1YLR087C MSB3P48566 633 aaPredicted RBP2.35□□□□□ -2.03
CSF1YLR087C HSH155P49955 971 aaKnown RBP2.35□□□□□ -2.03
CSF1YLR087C URC2Q04411 772 aa2.35□□□□□ -2.03
CSF1YLR087C VPS5Q92331 675 aa2.35□□□□□ -2.03
CSF1YLR087C SIR1P21691 654 aa2.35□□□□□ -2.03
CSF1YLR087C AAD3P25612 363 aa2.35□□□□□ -2.03
CSF1YLR087C PRR1P28708 518 aa2.35□□□□□ -2.03
CSF1YLR087C GRX4P32642 244 aa2.35□□□□□ -2.03
CSF1YLR087C APE3P37302 537 aaKnown RBP2.35□□□□□ -2.03
CSF1YLR087C MAL31P38156 614 aa2.35□□□□□ -2.03
CSF1YLR087C TAE1P38340 232 aa2.35□□□□□ -2.03
CSF1YLR087C SMF1P38925 575 aa2.35□□□□□ -2.03
CSF1YLR087C RIC1P40395 1056 aa2.35□□□□□ -2.03
CSF1YLR087C INP52P50942 1183 aa2.35□□□□□ -2.03
CSF1YLR087C OCA2P53949 197 aa2.35□□□□□ -2.03
CSF1YLR087C YPR084WQ06821 456 aa2.35□□□□□ -2.03
CSF1YLR087C JID1Q12350 301 aa2.35□□□□□ -2.03
CSF1YLR087C WHI5Q12416 295 aa2.35□□□□□ -2.03
CSF1YLR087C PRC1P00729 532 aa2.35□□□□□ -2.03
CSF1YLR087C CHO2P05374 869 aaKnown RBP2.35□□□□□ -2.03
CSF1YLR087C NAB2P32505 525 aaKnown RBP RIP-Chip data2.35□□□□□ -2.03not detected
CSF1YLR087C UBP11P36026 717 aa2.35□□□□□ -2.03
CSF1YLR087C UTP6Q02354 440 aaKnown RBP2.35□□□□□ -2.03
CSF1YLR087C ATC1Q04005 294 aa2.35□□□□□ -2.03
CSF1YLR087C SSK1Q07084 712 aa2.35□□□□□ -2.03
CSF1YLR087C LAM6Q08001 693 aa2.35□□□□□ -2.03
CSF1YLR087C CDC50P25656 391 aa2.35□□□□□ -2.03
CSF1YLR087C SPC34P36131 295 aa2.35□□□□□ -2.03
CSF1YLR087C ATG32P40458 529 aa2.35□□□□□ -2.03
CSF1YLR087C LYS20P48570 428 aaKnown RBP2.35□□□□□ -2.03
CSF1YLR087C TDA1Q03533 586 aa2.35□□□□□ -2.03
CSF1YLR087C ATP14Q12349 124 aa2.35□□□□□ -2.03
CSF1YLR087C MPD2Q99316 277 aa2.35□□□□□ -2.03
CSF1YLR087C HSF1P10961 833 aa2.35□□□□□ -2.03
CSF1YLR087C PGI1P12709 554 aaKnown RBP2.35□□□□□ -2.03
CSF1YLR087C DBP3P20447 523 aaKnown RBP2.35□□□□□ -2.03
CSF1YLR087C RGD1P38339 666 aa2.35□□□□□ -2.03
CSF1YLR087C EFM2P38347 419 aa2.35□□□□□ -2.03
CSF1YLR087C PAN5P38787 379 aa2.35□□□□□ -2.03
CSF1YLR087C CTM1P38818 585 aa2.35□□□□□ -2.03
CSF1YLR087C RPL13BP40212 199 aaKnown RBP2.35□□□□□ -2.03
CSF1YLR087C CAT5P41735 233 aa2.35□□□□□ -2.03
CSF1YLR087C UFE1P41834 346 aa2.35□□□□□ -2.03
CSF1YLR087C YJL016WP47072 561 aa2.35□□□□□ -2.03
CSF1YLR087C MAK10Q02197 733 aa2.35□□□□□ -2.03
CSF1YLR087C MFG1Q07684 458 aa2.35□□□□□ -2.03
CSF1YLR087C SAM4Q08985 325 aaKnown RBP2.35□□□□□ -2.03
CSF1YLR087C MDM20Q12387 796 aaKnown RBP2.35□□□□□ -2.03
CSF1YLR087C RPL13AQ12690 199 aaPredicted RBP2.35□□□□□ -2.03
CSF1YLR087C CDC28P00546 298 aaKnown RBP2.35□□□□□ -2.03
CSF1YLR087C QCR2P07257 368 aa2.35□□□□□ -2.03
CSF1YLR087C IMA3P0CW40 589 aa2.35□□□□□ -2.03
CSF1YLR087C IMA4P0CW41 589 aa2.35□□□□□ -2.03
CSF1YLR087C URA4P20051 364 aa2.35□□□□□ -2.03
CSF1YLR087C SKP2P42843 763 aa2.35□□□□□ -2.03
CSF1YLR087C IRC6P43615 237 aa2.35□□□□□ -2.03
CSF1YLR087C RBG2P53295 368 aaKnown RBP2.35□□□□□ -2.03
CSF1YLR087C AAT1Q01802 451 aa2.35□□□□□ -2.03
CSF1YLR087C TFB2Q02939 513 aa2.35□□□□□ -2.03
CSF1YLR087C YDR109CQ04585 715 aa2.35□□□□□ -2.03
CSF1YLR087C BRX1Q08235 291 aaKnown RBP2.35□□□□□ -2.03
CSF1YLR087C IMA2Q08295 589 aa2.35□□□□□ -2.03
CSF1YLR087C ENV7Q12003 364 aa2.35□□□□□ -2.03
CSF1YLR087C TAH18Q12181 623 aa2.35□□□□□ -2.03
CSF1YLR087C ATP2P00830 511 aaKnown RBP2.34□□□□□ -2.03
CSF1YLR087C PRP5P21372 849 aaPredicted RBP2.34□□□□□ -2.03
CSF1YLR087C NPP1P25353 742 aa2.34□□□□□ -2.03
CSF1YLR087C NDI1P32340 513 aa2.34□□□□□ -2.03
CSF1YLR087C HEM12P32347 362 aaPredicted RBP2.34□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms