RNA–Protein interactions for RNA: YLR005W

SSL1, Transcript of Subunit of the core form of RNA polymerase transcription factor TFIIH, yeast

Gene SSL1, Length 1,386 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSL1	YLR005W	CDA1	Q06702	301 aa		4.1	□□□□□ -1.75
SSL1	YLR005W	MLH2	Q07980	695 aa		4.1	□□□□□ -1.75
SSL1	YLR005W	PIN2	Q12057	282 aa		4.1	□□□□□ -1.75
SSL1	YLR005W	NBP2	Q12163	236 aa		4.1	□□□□□ -1.75
SSL1	YLR005W	REV1	P12689	985 aa		4.09	□□□□□ -1.75
SSL1	YLR005W	FPR1	P20081	114 aa	Known RBP	4.09	□□□□□ -1.75
SSL1	YLR005W	KIN3	P22209	435 aa		4.09	□□□□□ -1.75
SSL1	YLR005W	EFB1	P32471	206 aa	Known RBP	4.09	□□□□□ -1.75
SSL1	YLR005W	FRE1	P32791	686 aa		4.09	□□□□□ -1.75
SSL1	YLR005W	SWE1	P32944	819 aa		4.09	□□□□□ -1.75
SSL1	YLR005W	YKL069W	P36088	180 aa		4.09	□□□□□ -1.75
SSL1	YLR005W	VBA5	P36172	582 aa		4.09	□□□□□ -1.75
SSL1	YLR005W	YBR056W	P38081	501 aa		4.09	□□□□□ -1.75
SSL1	YLR005W	AGP2	P38090	596 aa		4.09	□□□□□ -1.75
SSL1	YLR005W	RFT1	P38206	574 aa	Predicted RBP	4.09	□□□□□ -1.75
SSL1	YLR005W	SIF2	P38262	535 aa		4.09	□□□□□ -1.75
SSL1	YLR005W	VAC8	P39968	578 aa		4.09	□□□□□ -1.75
SSL1	YLR005W	CHA4	P43634	648 aa		4.09	□□□□□ -1.75
SSL1	YLR005W	MTD1	Q02046	320 aa	Known RBP	4.09	□□□□□ -1.75
SSL1	YLR005W	MZM1	Q03429	123 aa	Predicted RBP	4.09	□□□□□ -1.75
SSL1	YLR005W	PSR2	Q07949	397 aa		4.09	□□□□□ -1.75
SSL1	YLR005W	OPI10	Q08202	246 aa		4.09	□□□□□ -1.75
SSL1	YLR005W	DAL7	P21826	554 aa		4.08	□□□□□ -1.76
SSL1	YLR005W	AGP1	P25376	633 aa		4.08	□□□□□ -1.76
SSL1	YLR005W	SBA1	P28707	216 aa	Known RBP	4.08	□□□□□ -1.76
SSL1	YLR005W	DCG1	P32460	244 aa		4.08	□□□□□ -1.76
SSL1	YLR005W	SGE1	P33335	543 aa		4.08	□□□□□ -1.76
SSL1	YLR005W	NOP4	P37838	685 aa	Known RBP	4.08	□□□□□ -1.76
SSL1	YLR005W	ECM13	P38195	257 aa		4.08	□□□□□ -1.76
SSL1	YLR005W	YBR225W	P38321	900 aa		4.08	□□□□□ -1.76
SSL1	YLR005W	YPT35	P38815	214 aa	Known RBP	4.08	□□□□□ -1.76
SSL1	YLR005W	GDH3	P39708	457 aa		4.08	□□□□□ -1.76
SSL1	YLR005W	AVT2	P39981	480 aa		4.08	□□□□□ -1.76
SSL1	YLR005W	DSE1	P40077	573 aa		4.08	□□□□□ -1.76
SSL1	YLR005W	OSW5	P40219	148 aa		4.08	□□□□□ -1.76
SSL1	YLR005W	RMD8	P43620	662 aa		4.08	□□□□□ -1.76
SSL1	YLR005W	SLI1	P53304	468 aa		4.08	□□□□□ -1.76
SSL1	YLR005W	YPL014W	Q02606	381 aa		4.08	□□□□□ -1.76
SSL1	YLR005W	MUB1	Q03162	620 aa		4.08	□□□□□ -1.76
SSL1	YLR005W	VPS20	Q04272	221 aa		4.08	□□□□□ -1.76
SSL1	YLR005W	ECM22	Q05958	814 aa	Predicted RBP	4.08	□□□□□ -1.76
SSL1	YLR005W	TSR1	Q07381	788 aa	Known RBP	4.08	□□□□□ -1.76
SSL1	YLR005W	IWR1	Q07532	353 aa	Predicted RBP	4.08	□□□□□ -1.76
SSL1	YLR005W	ABP140	Q08641	628 aa	Known RBP	4.08	□□□□□ -1.76
SSL1	YLR005W	BRR2	P32639	2163 aa	Known RBP	4.08	□□□□□ -1.76
SSL1	YLR005W	OM45	P16547	393 aa		4.07	□□□□□ -1.76
SSL1	YLR005W	RNR1	P21524	888 aa	Known RBP	4.07	□□□□□ -1.76
SSL1	YLR005W	RDS1	P25611	832 aa		4.07	□□□□□ -1.76
SSL1	YLR005W	CDC15	P27636	974 aa		4.07	□□□□□ -1.76
SSL1	YLR005W	FUN30	P31380	1131 aa		4.07	□□□□□ -1.76
SSL1	YLR005W	TCD2	P36101	447 aa	Known RBP	4.07	□□□□□ -1.76
SSL1	YLR005W	YMC2	P38087	329 aa		4.07	□□□□□ -1.76
SSL1	YLR005W	CTM1	P38818	585 aa		4.07	□□□□□ -1.76
SSL1	YLR005W	FHL1	P39521	936 aa		4.07	□□□□□ -1.76
SSL1	YLR005W	TOS3	P43637	560 aa		4.07	□□□□□ -1.76
SSL1	YLR005W	SRP1	Q02821	542 aa	Known RBP	4.07	□□□□□ -1.76
SSL1	YLR005W	GIR2	Q03768	265 aa	Predicted RBP	4.07	□□□□□ -1.76
SSL1	YLR005W	CSR1	Q06705	408 aa	Known RBP	4.07	□□□□□ -1.76
SSL1	YLR005W	TLG2	Q08144	397 aa		4.07	□□□□□ -1.76
SSL1	YLR005W	CLP1	Q08685	445 aa	Predicted RBP	4.07	□□□□□ -1.76
SSL1	YLR005W	KCS1	Q12494	1050 aa		4.07	□□□□□ -1.76
SSL1	YLR005W	HSF1	P10961	833 aa		4.06	□□□□□ -1.76
SSL1	YLR005W	BIK1	P11709	440 aa		4.06	□□□□□ -1.76
SSL1	YLR005W	SAT4	P25333	603 aa	Known RBP	4.06	□□□□□ -1.76
SSL1	YLR005W	VBA3	P25594	458 aa		4.06	□□□□□ -1.76
SSL1	YLR005W	CDC12	P32468	407 aa	Known RBP	4.06	□□□□□ -1.76
SSL1	YLR005W	TFB1	P32776	642 aa		4.06	□□□□□ -1.76
SSL1	YLR005W	XRS2	P33301	854 aa		4.06	□□□□□ -1.76
SSL1	YLR005W	OCA5	P38738	679 aa		4.06	□□□□□ -1.76
SSL1	YLR005W	MSS4	P38994	779 aa		4.06	□□□□□ -1.76
SSL1	YLR005W	YJR061W	P40355	935 aa		4.06	□□□□□ -1.76
SSL1	YLR005W	RSM25	P40496	264 aa		4.06	□□□□□ -1.76
SSL1	YLR005W	ERG10	P41338	398 aa	Known RBP	4.06	□□□□□ -1.76
SSL1	YLR005W	UFE1	P41834	346 aa		4.06	□□□□□ -1.76
SSL1	YLR005W	RSC1	P53236	928 aa		4.06	□□□□□ -1.76
SSL1	YLR005W	YPR196W	Q06595	470 aa		4.06	□□□□□ -1.76
SSL1	YLR005W	CDC42	P19073	191 aa		4.05	□□□□□ -1.76
SSL1	YLR005W	RRT12	P25381	491 aa		4.05	□□□□□ -1.76
SSL1	YLR005W	LRE1	P25579	583 aa	Known RBP	4.05	□□□□□ -1.76
SSL1	YLR005W	PMI40	P29952	429 aa	Known RBP	4.05	□□□□□ -1.76
SSL1	YLR005W	STE5	P32917	917 aa		4.05	□□□□□ -1.76
SSL1	YLR005W	YKL091C	P33324	310 aa	Known RBP	4.05	□□□□□ -1.76
SSL1	YLR005W	HEM14	P40012	539 aa		4.05	□□□□□ -1.76
SSL1	YLR005W	CPR7	P47103	393 aa		4.05	□□□□□ -1.76
SSL1	YLR005W	FLC3	P53121	802 aa		4.05	□□□□□ -1.76
SSL1	YLR005W	COP1	P53622	1201 aa	Known RBP	4.05	□□□□□ -1.76
SSL1	YLR005W	TDA7	P53882	636 aa	Predicted RBP	4.05	□□□□□ -1.76
SSL1	YLR005W	CEF1	Q03654	590 aa	Predicted RBP	4.05	□□□□□ -1.76
SSL1	YLR005W	RTN1	Q04947	295 aa	Known RBP	4.05	□□□□□ -1.76
SSL1	YLR005W	COG4	Q06096	861 aa		4.05	□□□□□ -1.76
SSL1	YLR005W	DDC1	Q08949	612 aa		4.05	□□□□□ -1.76
SSL1	YLR005W	YOL098C	Q12496	1037 aa		4.05	□□□□□ -1.76
SSL1	YLR005W	ECM3	Q99252	613 aa		4.05	□□□□□ -1.76
SSL1	YLR005W	CBF2	P32504	956 aa		4.04	□□□□□ -1.76
SSL1	YLR005W	STE13	P33894	931 aa		4.04	□□□□□ -1.76
SSL1	YLR005W	DEF1	P35732	738 aa	Known RBP	4.04	□□□□□ -1.76
SSL1	YLR005W	YKT6	P36015	200 aa	Known RBP	4.04	□□□□□ -1.76
SSL1	YLR005W	SRX1	P36077	127 aa		4.04	□□□□□ -1.76
SSL1	YLR005W	BAT1	P38891	393 aa	Known RBP	4.04	□□□□□ -1.76
SSL1	YLR005W	DUN1	P39009	513 aa		4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 38 ms