RNA–Protein interactions for RNA: YLL049W

LDB18, Transcript of Component of the dynactin complex, yeastyeast

Gene LDB18, Length 540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB18YLL049W CDC55Q00362 526 aa5.39□□□□□ -1.55
LDB18YLL049W VPS16Q03308 798 aa5.39□□□□□ -1.55
LDB18YLL049W TRS23Q03784 219 aa5.39□□□□□ -1.55
LDB18YLL049W STP3Q05937 343 aa5.39□□□□□ -1.55
LDB18YLL049W YLL032CQ07834 825 aaKnown RBP RIP-Chip data5.39□□□□□ -1.55not detected
LDB18YLL049W BSC6Q08280 497 aa5.39□□□□□ -1.55
LDB18YLL049W YPL272CQ08984 517 aa5.39□□□□□ -1.55
LDB18YLL049W MIS1P09440 975 aaKnown RBP5.38□□□□□ -1.55
LDB18YLL049W MCM1P11746 286 aa5.38□□□□□ -1.55
LDB18YLL049W SST2P11972 698 aaKnown RBP5.38□□□□□ -1.55
LDB18YLL049W STE6P12866 1290 aa5.38□□□□□ -1.55
LDB18YLL049W OM45P16547 393 aa5.38□□□□□ -1.55
LDB18YLL049W MRPL33P20084 86 aa5.38□□□□□ -1.55
LDB18YLL049W CLN2P20438 545 aa5.38□□□□□ -1.55
LDB18YLL049W MNE1P24720 663 aa5.38□□□□□ -1.55
LDB18YLL049W RNQ1P25367 405 aa5.38□□□□□ -1.55
LDB18YLL049W RFT1P38206 574 aaPredicted RBP5.38□□□□□ -1.55
LDB18YLL049W KAP104P38217 918 aaKnown RBP5.38□□□□□ -1.55
LDB18YLL049W HSL7P38274 827 aa5.38□□□□□ -1.55
LDB18YLL049W RAD26P40352 1085 aa5.38□□□□□ -1.55
LDB18YLL049W NUP85P46673 744 aa5.38□□□□□ -1.55
LDB18YLL049W COS5P47187 383 aa5.38□□□□□ -1.55
LDB18YLL049W IPI3P53877 555 aa5.38□□□□□ -1.55
LDB18YLL049W YMR178WQ03219 274 aaKnown RBP5.38□□□□□ -1.55
LDB18YLL049W HED1Q03937 162 aa5.38□□□□□ -1.55
LDB18YLL049W POB3Q04636 552 aaKnown RBP5.38□□□□□ -1.55
LDB18YLL049W YLR297WQ05899 129 aa5.38□□□□□ -1.55
LDB18YLL049W COG4Q06096 861 aa5.38□□□□□ -1.55
LDB18YLL049W THI20Q08224 551 aa5.38□□□□□ -1.55
LDB18YLL049W GUP2Q08929 609 aa5.38□□□□□ -1.55
LDB18YLL049W WTM2Q12206 467 aa5.38□□□□□ -1.55
LDB18YLL049W EMP46Q12396 444 aa5.38□□□□□ -1.55
LDB18YLL049W LEU1P07264 779 aaKnown RBP5.37□□□□□ -1.55
LDB18YLL049W YKR104WP0CE69 306 aa5.37□□□□□ -1.55
LDB18YLL049W SMC1P32908 1225 aa5.37□□□□□ -1.55
LDB18YLL049W SRB2P34162 210 aa5.37□□□□□ -1.55
LDB18YLL049W SEF1P34228 1148 aa5.37□□□□□ -1.55
LDB18YLL049W SCD5P34758 872 aa5.37□□□□□ -1.55
LDB18YLL049W ALY1P36117 915 aa5.37□□□□□ -1.55
LDB18YLL049W QNS1P38795 714 aaKnown RBP5.37□□□□□ -1.55
LDB18YLL049W RPS26AP39938 119 aaKnown RBP5.37□□□□□ -1.55
LDB18YLL049W RPS26BP39939 119 aaKnown RBP5.37□□□□□ -1.55
LDB18YLL049W PHO86P46956 311 aa5.37□□□□□ -1.55
LDB18YLL049W CTK3P46963 296 aaPredicted RBP5.37□□□□□ -1.55
LDB18YLL049W YJR124CP47159 448 aa5.37□□□□□ -1.55
LDB18YLL049W HXT16P47185 567 aa5.37□□□□□ -1.55
LDB18YLL049W HXT15P54854 567 aa5.37□□□□□ -1.55
LDB18YLL049W YPQ2Q06328 317 aa5.37□□□□□ -1.55
LDB18YLL049W TMS1Q12116 473 aa5.37□□□□□ -1.55
LDB18YLL049W SEC16P48415 2195 aaKnown RBP5.36□□□□□ -1.55
LDB18YLL049W HIS1P00498 297 aaKnown RBP5.36□□□□□ -1.55
LDB18YLL049W TUB1P09733 447 aaKnown RBP5.36□□□□□ -1.55
LDB18YLL049W MET16P18408 261 aaPredicted RBP5.36□□□□□ -1.55
LDB18YLL049W PRI2P20457 528 aa5.36□□□□□ -1.55
LDB18YLL049W PXL1P36166 706 aa5.36□□□□□ -1.55
LDB18YLL049W FSH1P38777 243 aaKnown RBP5.36□□□□□ -1.55
LDB18YLL049W TIM17P39515 158 aa5.36□□□□□ -1.55
LDB18YLL049W CEM1P39525 442 aa5.36□□□□□ -1.55
LDB18YLL049W PRM9P39551 298 aa5.36□□□□□ -1.55
LDB18YLL049W FAU1P40099 211 aa5.36□□□□□ -1.55
LDB18YLL049W PAN6P40459 309 aa5.36□□□□□ -1.55
LDB18YLL049W TMA108P40462 946 aa5.36□□□□□ -1.55
LDB18YLL049W CNN1P43618 361 aa5.36□□□□□ -1.55
LDB18YLL049W PMT3P47190 753 aa5.36□□□□□ -1.55
LDB18YLL049W YGL260WP53056 76 aa5.36□□□□□ -1.55
LDB18YLL049W HOP2P53187 214 aa5.36□□□□□ -1.55
LDB18YLL049W PEX31P53203 462 aa5.36□□□□□ -1.55
LDB18YLL049W LSC2P53312 427 aa5.36□□□□□ -1.55
LDB18YLL049W INP2Q03824 705 aa5.36□□□□□ -1.55
LDB18YLL049W VID22Q05934 901 aa5.36□□□□□ -1.55
LDB18YLL049W YPR114WQ06107 315 aa5.36□□□□□ -1.55
LDB18YLL049W AAD4Q07747 329 aa5.36□□□□□ -1.55
LDB18YLL049W HSP42Q12329 375 aa5.36□□□□□ -1.55
LDB18YLL049W STT4P37297 1900 aa5.35□□□□□ -1.55
LDB18YLL049W RPS3P05750 240 aaKnown RBP5.35□□□□□ -1.55
LDB18YLL049W GLN4P13188 809 aaKnown RBP5.35□□□□□ -1.55
LDB18YLL049W RED1P14291 827 aa5.35□□□□□ -1.55
LDB18YLL049W MRT4P33201 236 aaKnown RBP5.35□□□□□ -1.55
LDB18YLL049W ADD66P36040 267 aa5.35□□□□□ -1.55
LDB18YLL049W YAL037WP39728 267 aa5.35□□□□□ -1.55
LDB18YLL049W YER189WP40104 122 aa5.35□□□□□ -1.55
LDB18YLL049W HXT8P40886 569 aa5.35□□□□□ -1.55
LDB18YLL049W RPS10BP46784 105 aaKnown RBP5.35□□□□□ -1.55
LDB18YLL049W RTS3P53289 263 aa5.35□□□□□ -1.55
LDB18YLL049W YNL040WP53960 456 aaPredicted RBP5.35□□□□□ -1.55
LDB18YLL049W EGD1Q02642 157 aaKnown RBP5.35□□□□□ -1.55
LDB18YLL049W PPN1Q04119 674 aa5.35□□□□□ -1.55
LDB18YLL049W VPS20Q04272 221 aa5.35□□□□□ -1.55
LDB18YLL049W DFG5Q05031 458 aa5.35□□□□□ -1.55
LDB18YLL049W DIC1Q06143 298 aa5.35□□□□□ -1.55
LDB18YLL049W RPS10AQ08745 105 aaPredicted RBP5.35□□□□□ -1.55
LDB18YLL049W MPH2P0CD99 609 aa5.34□□□□□ -1.55
LDB18YLL049W MTF2P10849 440 aa5.34□□□□□ -1.55
LDB18YLL049W PUT4P15380 627 aa5.34□□□□□ -1.55
LDB18YLL049W EST1P17214 699 aaPredicted RBP5.34□□□□□ -1.55
LDB18YLL049W SCL1P21243 252 aaKnown RBP5.34□□□□□ -1.55
LDB18YLL049W ADY2P25613 283 aa5.34□□□□□ -1.55
LDB18YLL049W MVD1P32377 396 aaKnown RBP5.34□□□□□ -1.55
LDB18YLL049W FUI1P38196 639 aa5.34□□□□□ -1.55
LDB18YLL049W CBR1P38626 284 aaKnown RBP5.34□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms