RNA–Protein interactions for RNA: YKR043C

SHB17, Transcript of Sedoheptulose bisphosphatase involved in riboneogenesis, yeast

Gene SHB17, Length 816 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHB17	YKR043C	YPR114W	Q06107	315 aa		10.38	□□□□□ -0.75
SHB17	YKR043C	LDB18	Q07887	179 aa		10.38	□□□□□ -0.75
SHB17	YKR043C	QCR6	P00127	147 aa		10.37	□□□□□ -0.75
SHB17	YKR043C	CAN1	P04817	590 aa		10.37	□□□□□ -0.75
SHB17	YKR043C	LEU1	P07264	779 aa	Known RBP	10.37	□□□□□ -0.75
SHB17	YKR043C	MNE1	P24720	663 aa		10.37	□□□□□ -0.75
SHB17	YKR043C	BYE1	P36106	594 aa		10.37	□□□□□ -0.75
SHB17	YKR043C	BUD13	P46947	266 aa	Predicted RBP	10.37	□□□□□ -0.75
SHB17	YKR043C	YJR124C	P47159	448 aa		10.37	□□□□□ -0.75
SHB17	YKR043C	AQR1	P53943	586 aa		10.37	□□□□□ -0.75
SHB17	YKR043C	SIW14	P53965	281 aa		10.37	□□□□□ -0.75
SHB17	YKR043C	CDC14	Q00684	551 aa		10.37	□□□□□ -0.75
SHB17	YKR043C	MET14	Q02196	202 aa		10.37	□□□□□ -0.75
SHB17	YKR043C	CDC73	Q06697	393 aa		10.37	□□□□□ -0.75
SHB17	YKR043C	SFI1	Q12369	946 aa		10.37	□□□□□ -0.75
SHB17	YKR043C	RMP1	Q12530	201 aa		10.37	□□□□□ -0.75
SHB17	YKR043C	BEM2	P39960	2167 aa	Known RBP	10.36	□□□□□ -0.75
SHB17	YKR043C	YML002W	P0CF17	737 aa		10.36	□□□□□ -0.75
SHB17	YKR043C	IMA3	P0CW40	589 aa		10.36	□□□□□ -0.75
SHB17	YKR043C	IMA4	P0CW41	589 aa		10.36	□□□□□ -0.75
SHB17	YKR043C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	10.36	□□□□□ -0.75	not detected
SHB17	YKR043C	PRP9	P19736	530 aa	Known RBP	10.36	□□□□□ -0.75
SHB17	YKR043C	TSR4	P25040	408 aa		10.36	□□□□□ -0.75
SHB17	YKR043C	RBK1	P25332	333 aa		10.36	□□□□□ -0.75
SHB17	YKR043C	DCW1	P36091	449 aa		10.36	□□□□□ -0.75
SHB17	YKR043C	SCC4	P40090	624 aa		10.36	□□□□□ -0.75
SHB17	YKR043C	GLG2	P47011	380 aa		10.36	□□□□□ -0.75
SHB17	YKR043C	MAL13	P53338	473 aa		10.36	□□□□□ -0.75
SHB17	YKR043C	RPL22B	P56628	122 aa	Known RBP	10.36	□□□□□ -0.75
SHB17	YKR043C	RLI1	Q03195	608 aa	Known RBP	10.36	□□□□□ -0.75
SHB17	YKR043C	IMA2	Q08295	589 aa		10.36	□□□□□ -0.75
SHB17	YKR043C	ACM1	Q08981	209 aa		10.36	□□□□□ -0.75
SHB17	YKR043C	PET111	P08468	800 aa		10.35	□□□□□ -0.75
SHB17	YKR043C	ERR1	P0CX10	437 aa		10.35	□□□□□ -0.75
SHB17	YKR043C	ERR2	P0CX11	437 aa		10.35	□□□□□ -0.75
SHB17	YKR043C	PMA2	P19657	947 aa		10.35	□□□□□ -0.75
SHB17	YKR043C	CLN1	P20437	546 aa		10.35	□□□□□ -0.75
SHB17	YKR043C	MGT1	P26188	188 aa		10.35	□□□□□ -0.75
SHB17	YKR043C	CCR4	P31384	837 aa	Known RBP	10.35	□□□□□ -0.75
SHB17	YKR043C	MAP2	P38174	421 aa	Known RBP	10.35	□□□□□ -0.75
SHB17	YKR043C	YJR061W	P40355	935 aa		10.35	□□□□□ -0.75
SHB17	YKR043C	ERR3	P42222	437 aa		10.35	□□□□□ -0.75
SHB17	YKR043C	ATG36	P46983	293 aa		10.35	□□□□□ -0.75
SHB17	YKR043C	RPC11	Q04307	110 aa	Predicted RBP	10.35	□□□□□ -0.75
SHB17	YKR043C	JIP5	Q06214	492 aa	Predicted RBP	10.35	□□□□□ -0.75
SHB17	YKR043C	HOS1	Q12214	470 aa		10.35	□□□□□ -0.75
SHB17	YKR043C	GCR1	P07261	785 aa		10.34	□□□□□ -0.75
SHB17	YKR043C	DCC1	P25559	380 aa		10.34	□□□□□ -0.75
SHB17	YKR043C	HEM12	P32347	362 aa	Predicted RBP	10.34	□□□□□ -0.75
SHB17	YKR043C	RML2	P32611	393 aa		10.34	□□□□□ -0.75
SHB17	YKR043C	SRP101	P32916	621 aa		10.34	□□□□□ -0.75
SHB17	YKR043C	UBC6	P33296	250 aa	Predicted RBP	10.34	□□□□□ -0.75
SHB17	YKR043C	PMT1	P33775	817 aa		10.34	□□□□□ -0.75
SHB17	YKR043C	KES1	P35844	434 aa	Known RBP	10.34	□□□□□ -0.75
SHB17	YKR043C	TFA2	P36145	328 aa		10.34	□□□□□ -0.75
SHB17	YKR043C	YHR078W	P38799	552 aa		10.34	□□□□□ -0.75
SHB17	YKR043C	SIP4	P46954	829 aa		10.34	□□□□□ -0.75
SHB17	YKR043C	TAH11	P47112	604 aa		10.34	□□□□□ -0.75
SHB17	YKR043C	YGL140C	P53120	1219 aa		10.34	□□□□□ -0.75
SHB17	YKR043C	PCL10	P53124	433 aa		10.34	□□□□□ -0.75
SHB17	YKR043C	COG7	P53195	279 aa		10.34	□□□□□ -0.75
SHB17	YKR043C	VAC7	P53950	1165 aa		10.34	□□□□□ -0.75
SHB17	YKR043C	RSC4	Q02206	625 aa		10.34	□□□□□ -0.75
SHB17	YKR043C	SLU7	Q02775	382 aa	Known RBP	10.34	□□□□□ -0.75
SHB17	YKR043C	HEL2	Q05580	639 aa	Known RBP	10.34	□□□□□ -0.75
SHB17	YKR043C	NOP14	Q99207	810 aa	Known RBP	10.34	□□□□□ -0.75
SHB17	YKR043C	GID7	P25569	745 aa		10.33	□□□□□ -0.76
SHB17	YKR043C	NDI1	P32340	513 aa		10.33	□□□□□ -0.76
SHB17	YKR043C	AEP1	P32493	518 aa		10.33	□□□□□ -0.76
SHB17	YKR043C	CNS1	P33313	385 aa		10.33	□□□□□ -0.76
SHB17	YKR043C	SCD5	P34758	872 aa		10.33	□□□□□ -0.76
SHB17	YKR043C	SMF2	P38778	549 aa		10.33	□□□□□ -0.76
SHB17	YKR043C	PCF11	P39081	626 aa	Predicted RBP	10.33	□□□□□ -0.76
SHB17	YKR043C	RPL34B	P40525	121 aa	Known RBP	10.33	□□□□□ -0.76
SHB17	YKR043C	YNL320W	P42840	284 aa		10.33	□□□□□ -0.76
SHB17	YKR043C	CSN12	P47130	423 aa		10.33	□□□□□ -0.76
SHB17	YKR043C	SPC105	P53148	917 aa		10.33	□□□□□ -0.76
SHB17	YKR043C	YNL035C	P53962	389 aa	Known RBP	10.33	□□□□□ -0.76
SHB17	YKR043C	NUP100	Q02629	959 aa		10.33	□□□□□ -0.76
SHB17	YKR043C	YMR178W	Q03219	274 aa	Known RBP	10.33	□□□□□ -0.76
SHB17	YKR043C	VPS60	Q03390	229 aa		10.33	□□□□□ -0.76
SHB17	YKR043C	RIO1	Q12196	484 aa	Known RBP	10.33	□□□□□ -0.76
SHB17	YKR043C	LDB17	Q12342	491 aa		10.33	□□□□□ -0.76
SHB17	YKR043C	SRX1	P36077	127 aa		10.32	□□□□□ -0.76
SHB17	YKR043C	IRS4	P36115	615 aa	Known RBP	10.32	□□□□□ -0.76
SHB17	YKR043C	MSR1	P38714	643 aa		10.32	□□□□□ -0.76
SHB17	YKR043C	BAT1	P38891	393 aa	Known RBP	10.32	□□□□□ -0.76
SHB17	YKR043C	DPH1	P40487	425 aa	Known RBP	10.32	□□□□□ -0.76
SHB17	YKR043C	COQ5	P49017	307 aa		10.32	□□□□□ -0.76
SHB17	YKR043C	SAP4	P53036	818 aa		10.32	□□□□□ -0.76
SHB17	YKR043C	RTA1	P53047	317 aa		10.32	□□□□□ -0.76
SHB17	YKR043C	COG1	P53079	417 aa		10.32	□□□□□ -0.76
SHB17	YKR043C	OPI10	Q08202	246 aa		10.32	□□□□□ -0.76
SHB17	YKR043C	YLR149C	Q99296	730 aa		10.32	□□□□□ -0.76
SHB17	YKR043C	YOR338W	Q99326	363 aa		10.32	□□□□□ -0.76
SHB17	YKR043C	CBF1	P17106	351 aa		10.31	□□□□□ -0.76
SHB17	YKR043C	SPO16	P17122	198 aa		10.31	□□□□□ -0.76
SHB17	YKR043C	CHL1	P22516	861 aa	Predicted RBP	10.31	□□□□□ -0.76
SHB17	YKR043C	YSP3	P25036	478 aa		10.31	□□□□□ -0.76
SHB17	YKR043C	EMC1	P25574	760 aa		10.31	□□□□□ -0.76

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