RNA–Protein interactions for RNA: YKL030W

YKL030W, Transcript of Dubious open reading frame, yeast

Gene YKL030W, Length 606 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YKL030W	YKL030W	MSG5	P38590	489 aa		11.34	□□□□□ -0.59
YKL030W	YKL030W	SIP4	P46954	829 aa		11.34	□□□□□ -0.59
YKL030W	YKL030W	GLG2	P47011	380 aa		11.34	□□□□□ -0.59
YKL030W	YKL030W	IML2	P47031	731 aa		11.34	□□□□□ -0.59
YKL030W	YKL030W	STR3	P53101	465 aa	Known RBP	11.34	□□□□□ -0.59
YKL030W	YKL030W	COG7	P53195	279 aa		11.34	□□□□□ -0.59
YKL030W	YKL030W	CDC14	Q00684	551 aa		11.34	□□□□□ -0.59
YKL030W	YKL030W	YMR178W	Q03219	274 aa	Known RBP	11.34	□□□□□ -0.59
YKL030W	YKL030W	AVL9	Q12500	764 aa		11.34	□□□□□ -0.59
YKL030W	YKL030W	CHL1	P22516	861 aa	Predicted RBP	11.33	□□□□□ -0.6
YKL030W	YKL030W	ALY1	P36117	915 aa		11.33	□□□□□ -0.6
YKL030W	YKL030W	BUD13	P46947	266 aa	Predicted RBP	11.33	□□□□□ -0.6
YKL030W	YKL030W	YGL140C	P53120	1219 aa		11.33	□□□□□ -0.6
YKL030W	YKL030W	TEP1	P53916	434 aa		11.33	□□□□□ -0.6
YKL030W	YKL030W	MET14	Q02196	202 aa		11.33	□□□□□ -0.6
YKL030W	YKL030W	RSC4	Q02206	625 aa		11.33	□□□□□ -0.6
YKL030W	YKL030W	RLI1	Q03195	608 aa	Known RBP	11.33	□□□□□ -0.6
YKL030W	YKL030W	PPN1	Q04119	674 aa		11.33	□□□□□ -0.6
YKL030W	YKL030W	SAM4	Q08985	325 aa	Known RBP	11.33	□□□□□ -0.6
YKL030W	YKL030W	MCM16	Q12262	181 aa		11.33	□□□□□ -0.6
YKL030W	YKL030W	SEN1	Q00416	2231 aa	Known RBP	11.33	□□□□□ -0.6
YKL030W	YKL030W	RBK1	P25332	333 aa		11.32	□□□□□ -0.6
YKL030W	YKL030W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	11.32	□□□□□ -0.6	not detected
YKL030W	YKL030W	UTR2	P32623	467 aa		11.32	□□□□□ -0.6
YKL030W	YKL030W	TFB1	P32776	642 aa		11.32	□□□□□ -0.6
YKL030W	YKL030W	PMT1	P33775	817 aa		11.32	□□□□□ -0.6
YKL030W	YKL030W	TFA2	P36145	328 aa		11.32	□□□□□ -0.6
YKL030W	YKL030W	MSR1	P38714	643 aa		11.32	□□□□□ -0.6
YKL030W	YKL030W	SPC105	P53148	917 aa		11.32	□□□□□ -0.6
YKL030W	YKL030W	GND2	P53319	492 aa		11.32	□□□□□ -0.6
YKL030W	YKL030W	YPR003C	P53394	754 aa		11.32	□□□□□ -0.6
YKL030W	YKL030W	SIW14	P53965	281 aa		11.32	□□□□□ -0.6
YKL030W	YKL030W	QCR6	P00127	147 aa		11.31	□□□□□ -0.6
YKL030W	YKL030W	CDC24	P11433	854 aa	Predicted RBP	11.31	□□□□□ -0.6
YKL030W	YKL030W	YBP1	P38315	674 aa		11.31	□□□□□ -0.6
YKL030W	YKL030W	MAD1	P40957	749 aa		11.31	□□□□□ -0.6
YKL030W	YKL030W	URH1	Q04179	340 aa		11.31	□□□□□ -0.6
YKL030W	YKL030W	RPC11	Q04307	110 aa	Predicted RBP	11.31	□□□□□ -0.6
YKL030W	YKL030W	YOR338W	Q99326	363 aa		11.31	□□□□□ -0.6
YKL030W	YKL030W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	11.3	□□□□□ -0.6	not detected
YKL030W	YKL030W	DCC1	P25559	380 aa		11.3	□□□□□ -0.6
YKL030W	YKL030W	PMI40	P29952	429 aa	Known RBP	11.3	□□□□□ -0.6
YKL030W	YKL030W	GCD6	P32501	712 aa	Known RBP	11.3	□□□□□ -0.6
YKL030W	YKL030W	YKL151C	P36059	337 aa		11.3	□□□□□ -0.6
YKL030W	YKL030W	POP4	P38336	279 aa		11.3	□□□□□ -0.6
YKL030W	YKL030W	WSC4	P38739	605 aa		11.3	□□□□□ -0.6
YKL030W	YKL030W	PCL10	P53124	433 aa		11.3	□□□□□ -0.6
YKL030W	YKL030W	YDL129W	Q07555	291 aa		11.3	□□□□□ -0.6
YKL030W	YKL030W	HOS1	Q12214	470 aa		11.3	□□□□□ -0.6
YKL030W	YKL030W	Q0182	Q9ZZW1	134 aa		11.3	□□□□□ -0.6
YKL030W	YKL030W	CLN1	P20437	546 aa		11.29	□□□□□ -0.6
YKL030W	YKL030W	BRF1	P29056	596 aa		11.29	□□□□□ -0.6
YKL030W	YKL030W	NDI1	P32340	513 aa		11.29	□□□□□ -0.6
YKL030W	YKL030W	HEM12	P32347	362 aa	Predicted RBP	11.29	□□□□□ -0.6
YKL030W	YKL030W	SCD5	P34758	872 aa		11.29	□□□□□ -0.6
YKL030W	YKL030W	KES1	P35844	434 aa	Known RBP	11.29	□□□□□ -0.6
YKL030W	YKL030W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	11.29	□□□□□ -0.6	not detected
YKL030W	YKL030W	VHC1	P38329	1120 aa		11.29	□□□□□ -0.6
YKL030W	YKL030W	LRP1	P38801	184 aa	Known RBP	11.29	□□□□□ -0.6
YKL030W	YKL030W	TIF34	P40217	347 aa	Known RBP	11.29	□□□□□ -0.6
YKL030W	YKL030W	CSN12	P47130	423 aa		11.29	□□□□□ -0.6
YKL030W	YKL030W	MPC54	Q08550	464 aa		11.29	□□□□□ -0.6
YKL030W	YKL030W	GNT1	Q12096	491 aa		11.29	□□□□□ -0.6
YKL030W	YKL030W	RPL40A	P0CH08	128 aa	Known RBP	11.28	□□□□□ -0.6
YKL030W	YKL030W	RPL40B	P0CH09	128 aa	Known RBP	11.28	□□□□□ -0.6
YKL030W	YKL030W	ERR1	P0CX10	437 aa		11.28	□□□□□ -0.6
YKL030W	YKL030W	ERR2	P0CX11	437 aa		11.28	□□□□□ -0.6
YKL030W	YKL030W	EMC1	P25574	760 aa		11.28	□□□□□ -0.6
YKL030W	YKL030W	AEP1	P32493	518 aa		11.28	□□□□□ -0.6
YKL030W	YKL030W	SCC4	P40090	624 aa		11.28	□□□□□ -0.6
YKL030W	YKL030W	ERR3	P42222	437 aa		11.28	□□□□□ -0.6
YKL030W	YKL030W	VAC7	P53950	1165 aa		11.28	□□□□□ -0.6
YKL030W	YKL030W	UTP6	Q02354	440 aa	Known RBP	11.28	□□□□□ -0.6
YKL030W	YKL030W	SLU7	Q02775	382 aa	Known RBP	11.28	□□□□□ -0.6
YKL030W	YKL030W	GSF2	Q04697	403 aa	Known RBP	11.28	□□□□□ -0.6
YKL030W	YKL030W	CDC73	Q06697	393 aa		11.28	□□□□□ -0.6
YKL030W	YKL030W	LDB17	Q12342	491 aa		11.28	□□□□□ -0.6
YKL030W	YKL030W	NAG1	Q8TGN9	163 aa		11.28	□□□□□ -0.6
YKL030W	YKL030W	COX3	P00420	269 aa		11.27	□□□□□ -0.61
YKL030W	YKL030W	SPT15	P13393	240 aa	Known RBP	11.27	□□□□□ -0.61
YKL030W	YKL030W	POL30	P15873	258 aa	Known RBP	11.27	□□□□□ -0.61
YKL030W	YKL030W	TSR4	P25040	408 aa		11.27	□□□□□ -0.61
YKL030W	YKL030W	GCG1	P32656	232 aa	Known RBP	11.27	□□□□□ -0.61
YKL030W	YKL030W	SLX5	P32828	619 aa	Known RBP	11.27	□□□□□ -0.61
YKL030W	YKL030W	TAE1	P38340	232 aa		11.27	□□□□□ -0.61
YKL030W	YKL030W	SMF2	P38778	549 aa		11.27	□□□□□ -0.61
YKL030W	YKL030W	PFS1	P38872	237 aa		11.27	□□□□□ -0.61
YKL030W	YKL030W	SET2	P46995	733 aa	Known RBP	11.27	□□□□□ -0.61
YKL030W	YKL030W	MNN10	P50108	393 aa	Known RBP	11.27	□□□□□ -0.61
YKL030W	YKL030W	SAP4	P53036	818 aa		11.27	□□□□□ -0.61
YKL030W	YKL030W	COG1	P53079	417 aa		11.27	□□□□□ -0.61
YKL030W	YKL030W	YNL143C	P53908	130 aa		11.27	□□□□□ -0.61
YKL030W	YKL030W	YPL113C	Q02961	396 aa		11.27	□□□□□ -0.61
YKL030W	YKL030W	YDR131C	Q03899	556 aa		11.27	□□□□□ -0.61
YKL030W	YKL030W	VTI1	Q04338	217 aa		11.27	□□□□□ -0.61
YKL030W	YKL030W	PIN2	Q12057	282 aa		11.27	□□□□□ -0.61
YKL030W	YKL030W	IMA3	P0CW40	589 aa		11.26	□□□□□ -0.61
YKL030W	YKL030W	IMA4	P0CW41	589 aa		11.26	□□□□□ -0.61
YKL030W	YKL030W	YSP3	P25036	478 aa		11.26	□□□□□ -0.61
YKL030W	YKL030W	SLD2	P34252	453 aa		11.26	□□□□□ -0.61

Retrieved 100 of 5,963 RNA–protein pairs in 22.8 ms