RNA–Protein interactions for RNA: YIR009W

MSL1, Transcript of U2B component of U2 snRNP, yeastyeast

Gene MSL1, Length 336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSL1YIR009W RTC1Q08281 1341 aa2.58□□□□□ -2
MSL1YIR009W ILS1P09436 1072 aaKnown RBP2.57□□□□□ -2
MSL1YIR009W SSH4P32343 579 aa2.57□□□□□ -2
MSL1YIR009W GND1P38720 489 aaKnown RBP2.57□□□□□ -2
MSL1YIR009W MTG2P38860 518 aa2.57□□□□□ -2
MSL1YIR009W SAP1P39955 897 aaKnown RBP2.57□□□□□ -2
MSL1YIR009W EAF5P39995 279 aa2.57□□□□□ -2
MSL1YIR009W YAT2P40017 923 aa2.57□□□□□ -2
MSL1YIR009W YIL152WP40455 235 aa2.57□□□□□ -2
MSL1YIR009W MAD2P40958 196 aa2.57□□□□□ -2
MSL1YIR009W ERR3P42222 437 aa2.57□□□□□ -2
MSL1YIR009W ASK10P48361 1146 aa2.57□□□□□ -2
MSL1YIR009W ARA2Q04212 335 aa2.57□□□□□ -2
MSL1YIR009W PLM2Q04383 521 aa2.57□□□□□ -2
MSL1YIR009W NDD1Q08887 554 aa2.57□□□□□ -2
MSL1YIR009W CWC2Q12046 339 aaPredicted RBP2.57□□□□□ -2
MSL1YIR009W ATX2Q12067 313 aa2.57□□□□□ -2
MSL1YIR009W RTK1Q12100 620 aaPredicted RBP2.57□□□□□ -2
MSL1YIR009W GET3Q12154 354 aaKnown RBP2.57□□□□□ -2
MSL1YIR009W SWR1Q05471 1514 aa2.57□□□□□ -2
MSL1YIR009W MSS18P08593 268 aa2.56□□□□□ -2
MSL1YIR009W GFD2P25370 566 aaKnown RBP2.56□□□□□ -2
MSL1YIR009W MSH1P25846 959 aa2.56□□□□□ -2
MSL1YIR009W PRP45P28004 379 aaPredicted RBP2.56□□□□□ -2
MSL1YIR009W RPN12P32496 274 aa2.56□□□□□ -2
MSL1YIR009W STB5P38699 743 aa2.56□□□□□ -2
MSL1YIR009W TOM71P38825 639 aaKnown RBP2.56□□□□□ -2
MSL1YIR009W YIR016WP40572 265 aa2.56□□□□□ -2
MSL1YIR009W SAP185P40856 1058 aa2.56□□□□□ -2
MSL1YIR009W QRI7P43122 407 aa2.56□□□□□ -2
MSL1YIR009W IML2P47031 731 aa2.56□□□□□ -2
MSL1YIR009W HOL1P53389 586 aa2.56□□□□□ -2
MSL1YIR009W YNR071CP53757 342 aa2.56□□□□□ -2
MSL1YIR009W MOT3P54785 490 aaKnown RBP2.56□□□□□ -2
MSL1YIR009W VTC3Q02725 835 aa2.56□□□□□ -2
MSL1YIR009W DIN7Q12086 430 aa2.56□□□□□ -2
MSL1YIR009W PUF2Q12221 1075 aaKnown RBP RIP-Chip data2.56□□□□□ -2not detected
MSL1YIR009W UBX3Q12229 455 aa2.56□□□□□ -2
MSL1YIR009W KGD2P19262 463 aaPredicted RBP2.55□□□□□ -2
MSL1YIR009W PHO3P24031 467 aa2.55□□□□□ -2
MSL1YIR009W PET309P32522 965 aaPredicted RBP2.55□□□□□ -2
MSL1YIR009W ARO9P38840 513 aaPredicted RBP2.55□□□□□ -2
MSL1YIR009W ERV46P39727 415 aa2.55□□□□□ -2
MSL1YIR009W SAW1P39735 261 aa2.55□□□□□ -2
MSL1YIR009W ACA1P39970 489 aa2.55□□□□□ -2
MSL1YIR009W VPS27P40343 622 aaKnown RBP2.55□□□□□ -2
MSL1YIR009W GSM1P42950 618 aa2.55□□□□□ -2
MSL1YIR009W TEP1P53916 434 aa2.55□□□□□ -2
MSL1YIR009W BOP3P53958 396 aa2.55□□□□□ -2
MSL1YIR009W CEG1Q01159 459 aaPredicted RBP2.55□□□□□ -2
MSL1YIR009W YML131WQ03102 365 aa2.55□□□□□ -2
MSL1YIR009W YML053CQ04978 212 aa2.55□□□□□ -2
MSL1YIR009W YDL242WQ07746 117 aa2.55□□□□□ -2
MSL1YIR009W YOR389WQ08912 624 aa2.55□□□□□ -2
MSL1YIR009W PFA4Q12006 378 aa2.55□□□□□ -2
MSL1YIR009W HOS1Q12214 470 aa2.55□□□□□ -2
MSL1YIR009W SES1P07284 462 aaKnown RBP2.54□□□□□ -2
MSL1YIR009W YCR043CP25361 127 aa2.54□□□□□ -2
MSL1YIR009W YCR061WP25639 631 aa2.54□□□□□ -2
MSL1YIR009W MPE1P35728 441 aaKnown RBP2.54□□□□□ -2
MSL1YIR009W NOC2P39744 710 aaKnown RBP2.54□□□□□ -2
MSL1YIR009W SCS2P40075 244 aaKnown RBP2.54□□□□□ -2
MSL1YIR009W GIS2P53849 153 aaKnown RBP RIP-Chip data2.54□□□□□ -2not detected
MSL1YIR009W GTR1Q00582 310 aa2.54□□□□□ -2
MSL1YIR009W YMR018WQ04364 514 aa2.54□□□□□ -2
MSL1YIR009W SSP2Q08646 371 aa2.54□□□□□ -2
MSL1YIR009W YOR111WQ99210 232 aa2.54□□□□□ -2
MSL1YIR009W SSM4P40318 1319 aa2.53□□□□□ -2
MSL1YIR009W INH1P01097 85 aa2.53□□□□□ -2
MSL1YIR009W CNA1P23287 553 aa2.53□□□□□ -2
MSL1YIR009W MCM10P32354 571 aa2.53□□□□□ -2
MSL1YIR009W SSP120P39931 234 aaKnown RBP2.53□□□□□ -2
MSL1YIR009W STL1P39932 569 aa2.53□□□□□ -2
MSL1YIR009W RPT2P40327 437 aaKnown RBP2.53□□□□□ -2
MSL1YIR009W TES1P41903 349 aaKnown RBP2.53□□□□□ -2
MSL1YIR009W IDS2P46958 469 aa2.53□□□□□ -2
MSL1YIR009W MAD3P47074 515 aa2.53□□□□□ -2
MSL1YIR009W PAP2P53632 584 aaKnown RBP2.53□□□□□ -2
MSL1YIR009W CNM67P53865 581 aaKnown RBP2.53□□□□□ -2
MSL1YIR009W YAT1P80235 687 aa2.53□□□□□ -2
MSL1YIR009W ACS1Q01574 713 aa2.53□□□□□ -2
MSL1YIR009W BLS1Q06071 122 aa2.53□□□□□ -2
MSL1YIR009W PSR2Q07949 397 aa2.53□□□□□ -2
MSL1YIR009W MLH2Q07980 695 aa2.53□□□□□ -2
MSL1YIR009W DSE3Q08729 430 aa2.53□□□□□ -2
MSL1YIR009W YER175W-AQ8TGU4 54 aa2.53□□□□□ -2
MSL1YIR009W MSM1P22438 575 aa2.52□□□□□ -2.01
MSL1YIR009W CHS3P29465 1165 aa2.52□□□□□ -2.01
MSL1YIR009W PRE2P30656 287 aaKnown RBP2.52□□□□□ -2.01
MSL1YIR009W SCO2P38072 301 aa2.52□□□□□ -2.01
MSL1YIR009W APM3P38153 483 aa2.52□□□□□ -2.01
MSL1YIR009W ARC40P38328 384 aaKnown RBP2.52□□□□□ -2.01
MSL1YIR009W LNP1P38878 278 aa2.52□□□□□ -2.01
MSL1YIR009W UBP7P40453 1071 aa2.52□□□□□ -2.01
MSL1YIR009W YJL107CP42947 387 aa2.52□□□□□ -2.01
MSL1YIR009W AAT1Q01802 451 aa2.52□□□□□ -2.01
MSL1YIR009W YMR034CQ05131 434 aaPredicted RBP2.52□□□□□ -2.01
MSL1YIR009W RRI1Q12468 440 aa2.52□□□□□ -2.01
MSL1YIR009W NUC1P08466 329 aa2.51□□□□□ -2.01
MSL1YIR009W ADH4P10127 382 aa2.51□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms