RNA–Protein interactions for RNA: YHL025W

SNF6, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeast

Gene SNF6, Length 999 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF6	YHL025W	SLD2	P34252	453 aa		11.49	□□□□□ -0.57
SNF6	YHL025W	CAB3	P36076	571 aa		11.49	□□□□□ -0.57
SNF6	YHL025W	IST3	P40565	148 aa	Predicted RBP	11.49	□□□□□ -0.57
SNF6	YHL025W	TRF5	P48561	642 aa	Known RBP	11.49	□□□□□ -0.57
SNF6	YHL025W	CDC14	Q00684	551 aa		11.49	□□□□□ -0.57
SNF6	YHL025W	RPN4	Q03465	531 aa		11.49	□□□□□ -0.57
SNF6	YHL025W	INO1	P11986	533 aa		11.48	□□□□□ -0.57
SNF6	YHL025W	ARP1	P38696	384 aa		11.48	□□□□□ -0.57
SNF6	YHL025W	LIA1	P47120	325 aa	Known RBP	11.48	□□□□□ -0.57
SNF6	YHL025W	ASN2	P49090	572 aa	Known RBP	11.48	□□□□□ -0.57
SNF6	YHL025W	TEP1	P53916	434 aa		11.48	□□□□□ -0.57
SNF6	YHL025W	YPL014W	Q02606	381 aa		11.48	□□□□□ -0.57
SNF6	YHL025W	PML39	Q03760	334 aa		11.48	□□□□□ -0.57
SNF6	YHL025W	BUD22	Q04347	519 aa	Known RBP	11.48	□□□□□ -0.57
SNF6	YHL025W	YLR053C	Q12026	108 aa		11.48	□□□□□ -0.57
SNF6	YHL025W	AAT2	P23542	418 aa	Known RBP	11.47	□□□□□ -0.57
SNF6	YHL025W	SIS1	P25294	352 aa	Known RBP	11.47	□□□□□ -0.57
SNF6	YHL025W	TGL4	P36165	910 aa		11.47	□□□□□ -0.57
SNF6	YHL025W	MRPL40	P36534	297 aa		11.47	□□□□□ -0.57
SNF6	YHL025W	YBR032W	P38223	100 aa		11.47	□□□□□ -0.57
SNF6	YHL025W	SSP120	P39931	234 aa	Known RBP	11.47	□□□□□ -0.57
SNF6	YHL025W	STR3	P53101	465 aa	Known RBP	11.47	□□□□□ -0.57
SNF6	YHL025W	BIO4	P53630	237 aa		11.47	□□□□□ -0.57
SNF6	YHL025W	HST2	P53686	357 aa		11.47	□□□□□ -0.57
SNF6	YHL025W	YNR063W	P53749	607 aa		11.47	□□□□□ -0.57
SNF6	YHL025W	RSC4	Q02206	625 aa		11.47	□□□□□ -0.57
SNF6	YHL025W	LEE1	Q02799	301 aa	Known RBP	11.47	□□□□□ -0.57
SNF6	YHL025W	CDC123	Q05791	360 aa		11.47	□□□□□ -0.57
SNF6	YHL025W	YCS4	Q06156	1176 aa		11.47	□□□□□ -0.57
SNF6	YHL025W	LDB18	Q07887	179 aa		11.47	□□□□□ -0.57
SNF6	YHL025W	SLD7	Q08457	257 aa		11.47	□□□□□ -0.57
SNF6	YHL025W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	11.46	□□□□□ -0.57	not detected
SNF6	YHL025W	APM3	P38153	483 aa		11.46	□□□□□ -0.57
SNF6	YHL025W	HXT5	P38695	592 aa		11.46	□□□□□ -0.57
SNF6	YHL025W	LIN1	P38852	340 aa	Predicted RBP	11.46	□□□□□ -0.57
SNF6	YHL025W	TFG1	P41895	735 aa	Predicted RBP	11.46	□□□□□ -0.57
SNF6	YHL025W	FAP1	P53971	965 aa		11.46	□□□□□ -0.57
SNF6	YHL025W	YML119W	Q03208	357 aa		11.46	□□□□□ -0.57
SNF6	YHL025W	YMR206W	Q03695	313 aa		11.46	□□□□□ -0.57
SNF6	YHL025W	NHX1	Q04121	633 aa		11.46	□□□□□ -0.57
SNF6	YHL025W	SLP1	Q12232	587 aa		11.46	□□□□□ -0.57
SNF6	YHL025W	YEL077C	Q3E7X8	1277 aa		11.46	□□□□□ -0.57
SNF6	YHL025W	ENO1	P00924	437 aa	Known RBP	11.45	□□□□□ -0.58
SNF6	YHL025W	ATP12	P22135	325 aa		11.45	□□□□□ -0.58
SNF6	YHL025W	MIH1	P23748	554 aa		11.45	□□□□□ -0.58
SNF6	YHL025W	RIM1	P32445	135 aa	Known RBP	11.45	□□□□□ -0.58
SNF6	YHL025W	CRP1	P38845	465 aa	Known RBP	11.45	□□□□□ -0.58
SNF6	YHL025W	UBP7	P40453	1071 aa		11.45	□□□□□ -0.58
SNF6	YHL025W	TDA10	P42938	290 aa		11.45	□□□□□ -0.58
SNF6	YHL025W	YJL107C	P42947	387 aa		11.45	□□□□□ -0.58
SNF6	YHL025W	TIM13	P53299	105 aa		11.45	□□□□□ -0.58
SNF6	YHL025W	NOP15	P53927	220 aa	Predicted RBP	11.45	□□□□□ -0.58
SNF6	YHL025W	SEG1	Q04279	960 aa		11.45	□□□□□ -0.58
SNF6	YHL025W	RSC2	Q06488	889 aa		11.45	□□□□□ -0.58
SNF6	YHL025W	KCS1	Q12494	1050 aa		11.45	□□□□□ -0.58
SNF6	YHL025W	RAM1	P22007	431 aa		11.44	□□□□□ -0.58
SNF6	YHL025W	HRR25	P29295	494 aa	Known RBP	11.44	□□□□□ -0.58
SNF6	YHL025W	BEM3	P32873	1128 aa		11.44	□□□□□ -0.58
SNF6	YHL025W	COY1	P34237	679 aa		11.44	□□□□□ -0.58
SNF6	YHL025W	GDT1	P38301	280 aa	Predicted RBP	11.44	□□□□□ -0.58
SNF6	YHL025W	BUD13	P46947	266 aa	Predicted RBP	11.44	□□□□□ -0.58
SNF6	YHL025W	CCT8	P47079	568 aa	Known RBP	11.44	□□□□□ -0.58
SNF6	YHL025W	TUB4	P53378	473 aa		11.44	□□□□□ -0.58
SNF6	YHL025W	YNL058C	P53947	316 aa		11.44	□□□□□ -0.58
SNF6	YHL025W	RPL34A	P87262	121 aa	Predicted RBP	11.44	□□□□□ -0.58
SNF6	YHL025W	CMS1	Q07897	291 aa	Known RBP	11.44	□□□□□ -0.58
SNF6	YHL025W	NDD1	Q08887	554 aa		11.44	□□□□□ -0.58
SNF6	YHL025W	CLN1	P20437	546 aa		11.43	□□□□□ -0.58
SNF6	YHL025W	CYM1	P32898	989 aa		11.43	□□□□□ -0.58
SNF6	YHL025W	MRP21	P38175	177 aa		11.43	□□□□□ -0.58
SNF6	YHL025W	EXO1	P39875	702 aa		11.43	□□□□□ -0.58
SNF6	YHL025W	YTP1	P53584	459 aa		11.43	□□□□□ -0.58
SNF6	YHL025W	RCF2	P53721	224 aa		11.43	□□□□□ -0.58
SNF6	YHL025W	BUD20	Q08004	166 aa	Predicted RBP	11.43	□□□□□ -0.58
SNF6	YHL025W	FMP27	Q06179	2628 aa		11.43	□□□□□ -0.58
SNF6	YHL025W	ERG20	P08524	352 aa	Known RBP	11.42	□□□□□ -0.58
SNF6	YHL025W	HSF1	P10961	833 aa		11.42	□□□□□ -0.58
SNF6	YHL025W	MRPL8	P22353	238 aa		11.42	□□□□□ -0.58
SNF6	YHL025W	GDA1	P32621	518 aa		11.42	□□□□□ -0.58
SNF6	YHL025W	YBR062C	P38239	180 aa		11.42	□□□□□ -0.58
SNF6	YHL025W	YHI9	P38765	294 aa		11.42	□□□□□ -0.58
SNF6	YHL025W	OAF1	P39720	1047 aa	Predicted RBP	11.42	□□□□□ -0.58
SNF6	YHL025W	PEP8	P40335	379 aa		11.42	□□□□□ -0.58
SNF6	YHL025W	AMA1	P50082	593 aa		11.42	□□□□□ -0.58
SNF6	YHL025W	YGL140C	P53120	1219 aa		11.42	□□□□□ -0.58
SNF6	YHL025W	EFM6	P53970	246 aa		11.42	□□□□□ -0.58
SNF6	YHL025W	NUP100	Q02629	959 aa		11.42	□□□□□ -0.58
SNF6	YHL025W	TRS31	Q03337	283 aa		11.42	□□□□□ -0.58
SNF6	YHL025W	YSH1	Q06224	779 aa	Predicted RBP	11.42	□□□□□ -0.58
SNF6	YHL025W	PEX15	Q08215	383 aa		11.42	□□□□□ -0.58
SNF6	YHL025W	SST2	P11972	698 aa	Known RBP	11.41	□□□□□ -0.58
SNF6	YHL025W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	11.41	□□□□□ -0.58	not detected
SNF6	YHL025W	AMD2	P22580	549 aa		11.41	□□□□□ -0.58
SNF6	YHL025W	YSP3	P25036	478 aa		11.41	□□□□□ -0.58
SNF6	YHL025W	MSH2	P25847	964 aa		11.41	□□□□□ -0.58
SNF6	YHL025W	DEP1	P31385	405 aa		11.41	□□□□□ -0.58
SNF6	YHL025W	RRP14	P36080	434 aa	Known RBP	11.41	□□□□□ -0.58
SNF6	YHL025W	YSW1	P38280	609 aa		11.41	□□□□□ -0.58
SNF6	YHL025W	GGA2	P38817	585 aa	Known RBP	11.41	□□□□□ -0.58
SNF6	YHL025W	YJL206C	P39529	758 aa		11.41	□□□□□ -0.58

Retrieved 100 of 5,963 RNA–protein pairs in 33.4 ms