RNA–Protein interactions for RNA: YGL172W

NUP49, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP49, Length 1,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP49YGL172W NOP6Q07623 225 aaKnown RBP6.91□□□□□ -1.3
NUP49YGL172W COX5AP00424 153 aa6.9□□□□□ -1.31
NUP49YGL172W GCR1P07261 785 aa6.9□□□□□ -1.31
NUP49YGL172W FUS1P11710 512 aa6.9□□□□□ -1.31
NUP49YGL172W CBF1P17106 351 aa6.9□□□□□ -1.31
NUP49YGL172W PLC1P32383 869 aa6.9□□□□□ -1.31
NUP49YGL172W KAR9P32526 644 aa6.9□□□□□ -1.31
NUP49YGL172W KES1P35844 434 aaKnown RBP6.9□□□□□ -1.31
NUP49YGL172W LAS1P36146 502 aaPredicted RBP6.9□□□□□ -1.31
NUP49YGL172W NEM1P38757 446 aa6.9□□□□□ -1.31
NUP49YGL172W EXO1P39875 702 aa6.9□□□□□ -1.31
NUP49YGL172W SCC4P40090 624 aa6.9□□□□□ -1.31
NUP49YGL172W INA22P40576 216 aa6.9□□□□□ -1.31
NUP49YGL172W SLU7Q02775 382 aaKnown RBP6.9□□□□□ -1.31
NUP49YGL172W YMR160WQ03823 816 aa6.9□□□□□ -1.31
NUP49YGL172W YSH1Q06224 779 aaPredicted RBP6.9□□□□□ -1.31
NUP49YGL172W NSE1Q07913 336 aa6.9□□□□□ -1.31
NUP49YGL172W PGC1Q08959 321 aa6.9□□□□□ -1.31
NUP49YGL172W OCA6Q12454 224 aa6.9□□□□□ -1.31
NUP49YGL172W FUR4P05316 633 aaKnown RBP6.89□□□□□ -1.31
NUP49YGL172W CMD1P06787 147 aaKnown RBP6.89□□□□□ -1.31
NUP49YGL172W DAL81P21657 970 aa6.89□□□□□ -1.31
NUP49YGL172W SPP381P38282 291 aaPredicted RBP6.89□□□□□ -1.31
NUP49YGL172W DUN1P39009 513 aa6.89□□□□□ -1.31
NUP49YGL172W BOL3P39724 118 aa6.89□□□□□ -1.31
NUP49YGL172W RRN7P40992 514 aa6.89□□□□□ -1.31
NUP49YGL172W MIC19P43594 170 aa6.89□□□□□ -1.31
NUP49YGL172W IML2P47031 731 aa6.89□□□□□ -1.31
NUP49YGL172W VEL1P53058 206 aa6.89□□□□□ -1.31
NUP49YGL172W PCL10P53124 433 aa6.89□□□□□ -1.31
NUP49YGL172W BIO5P53744 561 aaKnown RBP6.89□□□□□ -1.31
NUP49YGL172W REG1Q00816 1014 aa6.89□□□□□ -1.31
NUP49YGL172W PUN1Q06991 263 aa6.89□□□□□ -1.31
NUP49YGL172W FLC1Q08967 793 aa6.89□□□□□ -1.31
NUP49YGL172W YLR046CQ12253 270 aa6.89□□□□□ -1.31
NUP49YGL172W IMA3P0CW40 589 aa6.88□□□□□ -1.31
NUP49YGL172W IMA4P0CW41 589 aa6.88□□□□□ -1.31
NUP49YGL172W MIH1P23748 554 aa6.88□□□□□ -1.31
NUP49YGL172W TPS2P31688 896 aaKnown RBP6.88□□□□□ -1.31
NUP49YGL172W APM3P38153 483 aa6.88□□□□□ -1.31
NUP49YGL172W MSR1P38714 643 aa6.88□□□□□ -1.31
NUP49YGL172W RMD8P43620 662 aa6.88□□□□□ -1.31
NUP49YGL172W TAH11P47112 604 aa6.88□□□□□ -1.31
NUP49YGL172W ACS2P52910 683 aaKnown RBP6.88□□□□□ -1.31
NUP49YGL172W ROM1P53046 1155 aa6.88□□□□□ -1.31
NUP49YGL172W YPR003CP53394 754 aa6.88□□□□□ -1.31
NUP49YGL172W YNR061CP53747 219 aa6.88□□□□□ -1.31
NUP49YGL172W COG6P53959 839 aa6.88□□□□□ -1.31
NUP49YGL172W NUT2Q06213 157 aa6.88□□□□□ -1.31
NUP49YGL172W IMA2Q08295 589 aa6.88□□□□□ -1.31
NUP49YGL172W RSB1Q08417 382 aa6.88□□□□□ -1.31
NUP49YGL172W LDB17Q12342 491 aa6.88□□□□□ -1.31
NUP49YGL172W PEX11Q12462 236 aa6.88□□□□□ -1.31
NUP49YGL172W MPD2Q99316 277 aa6.88□□□□□ -1.31
NUP49YGL172W NUM1Q00402 2748 aa6.87□□□□□ -1.31
NUP49YGL172W ERR1P0CX10 437 aa6.87□□□□□ -1.31
NUP49YGL172W ERR2P0CX11 437 aa6.87□□□□□ -1.31
NUP49YGL172W SST2P11972 698 aaKnown RBP6.87□□□□□ -1.31
NUP49YGL172W PEP5P12868 1029 aa6.87□□□□□ -1.31
NUP49YGL172W MRPL8P22353 238 aa6.87□□□□□ -1.31
NUP49YGL172W GEX1P25596 615 aa6.87□□□□□ -1.31
NUP49YGL172W PMI40P29952 429 aaKnown RBP6.87□□□□□ -1.31
NUP49YGL172W RPC37P36121 282 aa6.87□□□□□ -1.31
NUP49YGL172W GEX2P36173 615 aa6.87□□□□□ -1.31
NUP49YGL172W SMF2P38778 549 aa6.87□□□□□ -1.31
NUP49YGL172W ELO3P40319 345 aa6.87□□□□□ -1.31
NUP49YGL172W MID1P41821 548 aa6.87□□□□□ -1.31
NUP49YGL172W ERR3P42222 437 aa6.87□□□□□ -1.31
NUP49YGL172W AIM23P47015 356 aa6.87□□□□□ -1.31
NUP49YGL172W PYK2P52489 506 aaKnown RBP6.87□□□□□ -1.31
NUP49YGL172W RTA1P53047 317 aa6.87□□□□□ -1.31
NUP49YGL172W GND2P53319 492 aa6.87□□□□□ -1.31
NUP49YGL172W RLI1Q03195 608 aaKnown RBP6.87□□□□□ -1.31
NUP49YGL172W MSH6Q03834 1242 aa6.87□□□□□ -1.31
NUP49YGL172W HOS1Q12214 470 aa6.87□□□□□ -1.31
NUP49YGL172W CET1O13297 549 aaPredicted RBP6.86□□□□□ -1.31
NUP49YGL172W RPB2P08518 1224 aaKnown RBP6.86□□□□□ -1.31
NUP49YGL172W PYC1P11154 1178 aaKnown RBP6.86□□□□□ -1.31
NUP49YGL172W TSR4P25040 408 aa6.86□□□□□ -1.31
NUP49YGL172W GID7P25569 745 aa6.86□□□□□ -1.31
NUP49YGL172W CDC20P26309 610 aa6.86□□□□□ -1.31
NUP49YGL172W URA7P28274 579 aaKnown RBP6.86□□□□□ -1.31
NUP49YGL172W NDI1P32340 513 aa6.86□□□□□ -1.31
NUP49YGL172W NFU1P32860 256 aa6.86□□□□□ -1.31
NUP49YGL172W STE13P33894 931 aa6.86□□□□□ -1.31
NUP49YGL172W YHL041WP38730 149 aa6.86□□□□□ -1.31
NUP49YGL172W QDR1P40475 563 aa6.86□□□□□ -1.31
NUP49YGL172W YIR007WP40566 764 aa6.86□□□□□ -1.31
NUP49YGL172W AIM14P53109 570 aa6.86□□□□□ -1.31
NUP49YGL172W FLC3P53121 802 aa6.86□□□□□ -1.31
NUP49YGL172W NMA2P53204 395 aa6.86□□□□□ -1.31
NUP49YGL172W RNH70P53331 553 aa6.86□□□□□ -1.31
NUP49YGL172W YTP1P53584 459 aa6.86□□□□□ -1.31
NUP49YGL172W CPR6P53691 371 aaKnown RBP6.86□□□□□ -1.31
NUP49YGL172W SIW14P53965 281 aa6.86□□□□□ -1.31
NUP49YGL172W CDC14Q00684 551 aa6.86□□□□□ -1.31
NUP49YGL172W PIR1Q03178 341 aa6.86□□□□□ -1.31
NUP49YGL172W YMR027WQ04371 470 aa6.86□□□□□ -1.31
NUP49YGL172W LDB18Q07887 179 aa6.86□□□□□ -1.31
NUP49YGL172W MSF1P08425 469 aa6.85□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms