RNA–Protein interactions for RNA: YGL050W

TYW3, Transcript of tRNA methyltransferase required for synthesis of wybutosine, yeast

Gene TYW3, Length 822 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TYW3	YGL050W	TSR1	Q07381	788 aa	Known RBP	4.91	□□□□□ -1.62
TYW3	YGL050W	SLX4	Q12098	748 aa		4.91	□□□□□ -1.62
TYW3	YGL050W	NTO1	Q12311	748 aa		4.91	□□□□□ -1.62
TYW3	YGL050W	UBR2	Q07963	1872 aa		4.9	□□□□□ -1.62
TYW3	YGL050W	PRC1	P00729	532 aa		4.9	□□□□□ -1.63
TYW3	YGL050W	COX4	P04037	155 aa		4.9	□□□□□ -1.63
TYW3	YGL050W	HAP2	P06774	265 aa		4.9	□□□□□ -1.63
TYW3	YGL050W	COX11	P19516	300 aa	Known RBP	4.9	□□□□□ -1.63
TYW3	YGL050W	SED4	P25365	1065 aa		4.9	□□□□□ -1.63
TYW3	YGL050W	KAR4	P25583	335 aa		4.9	□□□□□ -1.63
TYW3	YGL050W	SPC110	P32380	944 aa		4.9	□□□□□ -1.63
TYW3	YGL050W	VPH1	P32563	840 aa	Known RBP	4.9	□□□□□ -1.63
TYW3	YGL050W	KDX1	P36005	433 aa		4.9	□□□□□ -1.63
TYW3	YGL050W	EMC3	P36039	253 aa		4.9	□□□□□ -1.63
TYW3	YGL050W	JNM1	P36224	373 aa		4.9	□□□□□ -1.63
TYW3	YGL050W	SLX1	P38324	304 aa		4.9	□□□□□ -1.63
TYW3	YGL050W	SDP1	P40479	209 aa		4.9	□□□□□ -1.63
TYW3	YGL050W	OPT1	P40897	799 aa		4.9	□□□□□ -1.63
TYW3	YGL050W	DAS1	P47005	663 aa		4.9	□□□□□ -1.63
TYW3	YGL050W	DRN1	P53255	507 aa	Known RBP	4.9	□□□□□ -1.63
TYW3	YGL050W	SSL2	Q00578	843 aa		4.9	□□□□□ -1.63
TYW3	YGL050W	EMI2	Q04409	500 aa	Known RBP	4.9	□□□□□ -1.63
TYW3	YGL050W	CSR1	Q06705	408 aa	Known RBP	4.9	□□□□□ -1.63
TYW3	YGL050W	ABP140	Q08641	628 aa	Known RBP	4.9	□□□□□ -1.63
TYW3	YGL050W	ATP1	P07251	545 aa	Known RBP	4.89	□□□□□ -1.63
TYW3	YGL050W	CDC33	P07260	213 aa	Known RBP	4.89	□□□□□ -1.63
TYW3	YGL050W	MAS1	P10507	462 aa		4.89	□□□□□ -1.63
TYW3	YGL050W	POL3	P15436	1097 aa		4.89	□□□□□ -1.63
TYW3	YGL050W	SPO11	P23179	398 aa		4.89	□□□□□ -1.63
TYW3	YGL050W	SYN8	P31377	255 aa		4.89	□□□□□ -1.63
TYW3	YGL050W	PSY4	P38193	441 aa		4.89	□□□□□ -1.63
TYW3	YGL050W	CTF8	P38877	133 aa		4.89	□□□□□ -1.63
TYW3	YGL050W	FMP10	P40098	244 aa		4.89	□□□□□ -1.63
TYW3	YGL050W	SHQ1	P40486	507 aa	Predicted RBP	4.89	□□□□□ -1.63
TYW3	YGL050W	CPR7	P47103	393 aa		4.89	□□□□□ -1.63
TYW3	YGL050W	NIT3	P49954	291 aa		4.89	□□□□□ -1.63
TYW3	YGL050W	STB4	P50104	949 aa		4.89	□□□□□ -1.63
TYW3	YGL050W	MAL11	P53048	616 aa		4.89	□□□□□ -1.63
TYW3	YGL050W	SPC98	P53540	846 aa		4.89	□□□□□ -1.63
TYW3	YGL050W	YCG1	Q06680	1035 aa		4.89	□□□□□ -1.63
TYW3	YGL050W	CWC2	Q12046	339 aa	Predicted RBP	4.89	□□□□□ -1.63
TYW3	YGL050W	GIS3	Q12418	502 aa		4.89	□□□□□ -1.63
TYW3	YGL050W	CTF3	Q12748	733 aa		4.89	□□□□□ -1.63
TYW3	YGL050W	JIP3	O13555	125 aa		4.88	□□□□□ -1.63
TYW3	YGL050W	GAL80	P04387	435 aa		4.88	□□□□□ -1.63
TYW3	YGL050W	SNF1	P06782	633 aa	Known RBP	4.88	□□□□□ -1.63
TYW3	YGL050W	RRT12	P25381	491 aa		4.88	□□□□□ -1.63
TYW3	YGL050W	YCL002C	P25565	263 aa		4.88	□□□□□ -1.63
TYW3	YGL050W	CYS3	P31373	394 aa	Known RBP	4.88	□□□□□ -1.63
TYW3	YGL050W	NOP4	P37838	685 aa	Known RBP	4.88	□□□□□ -1.63
TYW3	YGL050W	PCM1	P38628	557 aa	Known RBP	4.88	□□□□□ -1.63
TYW3	YGL050W	GDH3	P39708	457 aa		4.88	□□□□□ -1.63
TYW3	YGL050W	VFA1	P40080	203 aa		4.88	□□□□□ -1.63
TYW3	YGL050W	SDS3	P40505	327 aa		4.88	□□□□□ -1.63
TYW3	YGL050W	OSW7	P43611	510 aa		4.88	□□□□□ -1.63
TYW3	YGL050W	TY4A-J	P47023	414 aa		4.88	□□□□□ -1.63
TYW3	YGL050W	NOG2	P53742	486 aa	Known RBP	4.88	□□□□□ -1.63
TYW3	YGL050W	ESBP6	P53918	673 aa		4.88	□□□□□ -1.63
TYW3	YGL050W	STP1	Q00947	519 aa		4.88	□□□□□ -1.63
TYW3	YGL050W	UME1	Q03010	460 aa		4.88	□□□□□ -1.63
TYW3	YGL050W	LRS4	Q04087	347 aa	Known RBP	4.88	□□□□□ -1.63
TYW3	YGL050W	MRI1	Q06489	411 aa	Known RBP	4.88	□□□□□ -1.63
TYW3	YGL050W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	not detected
TYW3	YGL050W	GUP2	Q08929	609 aa		4.88	□□□□□ -1.63
TYW3	YGL050W	YPR027C	Q12079	277 aa		4.88	□□□□□ -1.63
TYW3	YGL050W	RPS9A	O13516	197 aa	Known RBP	4.87	□□□□□ -1.63
TYW3	YGL050W	PHO13	P19881	312 aa		4.87	□□□□□ -1.63
TYW3	YGL050W	IME1	P21190	360 aa		4.87	□□□□□ -1.63
TYW3	YGL050W	LRE1	P25579	583 aa	Known RBP	4.87	□□□□□ -1.63
TYW3	YGL050W	GAC1	P28006	793 aa		4.87	□□□□□ -1.63
TYW3	YGL050W	SPC29	P33419	253 aa		4.87	□□□□□ -1.63
TYW3	YGL050W	RTT107	P38850	1070 aa		4.87	□□□□□ -1.63
TYW3	YGL050W	FAF1	P40546	346 aa	Predicted RBP	4.87	□□□□□ -1.63
TYW3	YGL050W	BFA1	P47113	574 aa		4.87	□□□□□ -1.63
TYW3	YGL050W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
TYW3	YGL050W	TAD1	P53065	400 aa		4.87	□□□□□ -1.63
TYW3	YGL050W	HOP2	P53187	214 aa		4.87	□□□□□ -1.63
TYW3	YGL050W	DAM1	P53267	343 aa		4.87	□□□□□ -1.63
TYW3	YGL050W	JJJ1	P53863	590 aa		4.87	□□□□□ -1.63
TYW3	YGL050W	PNG1	Q02890	363 aa		4.87	□□□□□ -1.63
TYW3	YGL050W	MZM1	Q03429	123 aa	Predicted RBP	4.87	□□□□□ -1.63
TYW3	YGL050W	ENB1	Q08299	606 aa		4.87	□□□□□ -1.63
TYW3	YGL050W	ATG9	Q12142	997 aa		4.87	□□□□□ -1.63
TYW3	YGL050W	HAL9	Q12180	1030 aa		4.87	□□□□□ -1.63
TYW3	YGL050W	ECM3	Q99252	613 aa		4.87	□□□□□ -1.63
TYW3	YGL050W	MTF2	P10849	440 aa		4.86	□□□□□ -1.63
TYW3	YGL050W	RNR1	P21524	888 aa	Known RBP	4.86	□□□□□ -1.63
TYW3	YGL050W	DAL2	P25335	343 aa		4.86	□□□□□ -1.63
TYW3	YGL050W	URK1	P27515	501 aa		4.86	□□□□□ -1.63
TYW3	YGL050W	FRE1	P32791	686 aa		4.86	□□□□□ -1.63
TYW3	YGL050W	MFT1	P33441	392 aa	Known RBP	4.86	□□□□□ -1.63
TYW3	YGL050W	CSG2	P35206	410 aa		4.86	□□□□□ -1.63
TYW3	YGL050W	DEF1	P35732	738 aa	Known RBP	4.86	□□□□□ -1.63
TYW3	YGL050W	HMT1	P38074	348 aa		4.86	□□□□□ -1.63
TYW3	YGL050W	SPC72	P39723	622 aa		4.86	□□□□□ -1.63
TYW3	YGL050W	YFL052W	P43551	465 aa		4.86	□□□□□ -1.63
TYW3	YGL050W	IES1	P43579	692 aa		4.86	□□□□□ -1.63
TYW3	YGL050W	VPS25	P47142	202 aa		4.86	□□□□□ -1.63
TYW3	YGL050W	BUL1	P48524	976 aa		4.86	□□□□□ -1.63
TYW3	YGL050W	GPD1	Q00055	391 aa	Known RBP	4.86	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 20.8 ms