RNA–Protein interactions for RNA: YER111C

SWI4, Transcript of DNA binding component of the SBF complex (Swi4p-Swi6p), yeastyeast

Gene SWI4, Length 3,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI4YER111C TY2A-DR3Q99303 438 aa1.45□□□□□ -2.18
SWI4YER111C SGS1P35187 1447 aa1.45□□□□□ -2.18
SWI4YER111C TY3B-GQ99315 1547 aa1.45□□□□□ -2.18
SWI4YER111C TRP4P07285 380 aaPredicted RBP1.44□□□□□ -2.18
SWI4YER111C CDC60P26637 1090 aaKnown RBP1.44□□□□□ -2.18
SWI4YER111C MAL33P38157 468 aa1.44□□□□□ -2.18
SWI4YER111C PCL5P38794 229 aa1.44□□□□□ -2.18
SWI4YER111C RTS1P38903 757 aa1.44□□□□□ -2.18
SWI4YER111C HRB1P38922 454 aaKnown RBP RIP-Chip data1.44□□□□□ -2.18not detected
SWI4YER111C FUN12P39730 1002 aaKnown RBP1.44□□□□□ -2.18
SWI4YER111C LRO1P40345 661 aa1.44□□□□□ -2.18
SWI4YER111C PFK26P40433 827 aaKnown RBP1.44□□□□□ -2.18
SWI4YER111C CIR1P42940 261 aa1.44□□□□□ -2.18
SWI4YER111C UBX6P47049 396 aa1.44□□□□□ -2.18
SWI4YER111C PHO23P50947 330 aa1.44□□□□□ -2.18
SWI4YER111C PRP43P53131 767 aaKnown RBP1.44□□□□□ -2.18
SWI4YER111C YNR061CP53747 219 aa1.44□□□□□ -2.18
SWI4YER111C HMO1Q03973 246 aaKnown RBP1.44□□□□□ -2.18
SWI4YER111C RAD30Q04049 632 aa1.44□□□□□ -2.18
SWI4YER111C YSH1Q06224 779 aaPredicted RBP1.44□□□□□ -2.18
SWI4YER111C ENT4Q07872 247 aa1.44□□□□□ -2.18
SWI4YER111C ENB1Q08299 606 aa1.44□□□□□ -2.18
SWI4YER111C MLH3Q12083 715 aa1.44□□□□□ -2.18
SWI4YER111C TRM13Q12383 476 aa1.44□□□□□ -2.18
SWI4YER111C SOD2P00447 233 aa1.44□□□□□ -2.18
SWI4YER111C SUI3P09064 285 aaKnown RBP1.44□□□□□ -2.18
SWI4YER111C RED1P14291 827 aa1.44□□□□□ -2.18
SWI4YER111C ERG8P24521 451 aa1.44□□□□□ -2.18
SWI4YER111C EFT1P32324 842 aaKnown RBP1.44□□□□□ -2.18
SWI4YER111C FRD1P32614 470 aaKnown RBP1.44□□□□□ -2.18
SWI4YER111C YPT7P32939 208 aa1.44□□□□□ -2.18
SWI4YER111C PPS1P38148 807 aa1.44□□□□□ -2.18
SWI4YER111C YBR053CP38235 358 aa1.44□□□□□ -2.18
SWI4YER111C KSP1P38691 1029 aaKnown RBP1.44□□□□□ -2.18
SWI4YER111C DOT5P40553 215 aa1.44□□□□□ -2.18
SWI4YER111C BST1P43571 1029 aa1.44□□□□□ -2.18
SWI4YER111C YJL163CP46996 555 aa1.44□□□□□ -2.18
SWI4YER111C LCL3P53153 274 aa1.44□□□□□ -2.18
SWI4YER111C TIM10P87108 93 aa1.44□□□□□ -2.18
SWI4YER111C MTG1Q03151 367 aaPredicted RBP1.44□□□□□ -2.18
SWI4YER111C EFR3Q03653 782 aaKnown RBP1.44□□□□□ -2.18
SWI4YER111C YML053CQ04978 212 aa1.44□□□□□ -2.18
SWI4YER111C TCO89Q08921 799 aa1.44□□□□□ -2.18
SWI4YER111C MET17P06106 444 aa1.44□□□□□ -2.18
SWI4YER111C SGF29P25554 259 aa1.44□□□□□ -2.18
SWI4YER111C DBF4P32325 704 aa1.44□□□□□ -2.18
SWI4YER111C IMP2'P32351 346 aa1.44□□□□□ -2.18
SWI4YER111C ALY1P36117 915 aa1.44□□□□□ -2.18
SWI4YER111C MRPL7P36519 292 aa1.44□□□□□ -2.18
SWI4YER111C CTP1P38152 299 aa1.44□□□□□ -2.18
SWI4YER111C REG2P38232 338 aa1.44□□□□□ -2.18
SWI4YER111C PIH1P38768 344 aa1.44□□□□□ -2.18
SWI4YER111C JHD1P40034 492 aa1.44□□□□□ -2.18
SWI4YER111C BAP3P41815 604 aa1.44□□□□□ -2.18
SWI4YER111C RMD8P43620 662 aa1.44□□□□□ -2.18
SWI4YER111C ASE1P50275 885 aa1.44□□□□□ -2.18
SWI4YER111C IMA1P53051 589 aa1.44□□□□□ -2.18
SWI4YER111C TAM41P53230 385 aa1.44□□□□□ -2.18
SWI4YER111C SSL2Q00578 843 aa1.44□□□□□ -2.18
SWI4YER111C YKU80Q04437 629 aa1.44□□□□□ -2.18
SWI4YER111C URN1Q06525 465 aaKnown RBP1.44□□□□□ -2.18
SWI4YER111C YER175W-AQ8TGU4 54 aa1.44□□□□□ -2.18
SWI4YER111C YOR019WQ99248 730 aa1.44□□□□□ -2.18
SWI4YER111C ARG3P05150 338 aa1.43□□□□□ -2.18
SWI4YER111C HCM1P25364 564 aa1.43□□□□□ -2.18
SWI4YER111C RNQ1P25367 405 aa1.43□□□□□ -2.18
SWI4YER111C POL4P25615 582 aa1.43□□□□□ -2.18
SWI4YER111C MRPL9P31334 269 aa1.43□□□□□ -2.18
SWI4YER111C ESL2P36168 1195 aa1.43□□□□□ -2.18
SWI4YER111C BUR6P40096 142 aa1.43□□□□□ -2.18
SWI4YER111C GPD2P41911 440 aaKnown RBP1.43□□□□□ -2.18
SWI4YER111C INP52P50942 1183 aa1.43□□□□□ -2.18
SWI4YER111C YIP4P53093 235 aa1.43□□□□□ -2.18
SWI4YER111C RNT1Q02555 471 aa1.43□□□□□ -2.18
SWI4YER111C YPL071CQ02864 156 aa1.43□□□□□ -2.18
SWI4YER111C ERO1Q03103 563 aa1.43□□□□□ -2.18
SWI4YER111C UFO1Q04511 668 aa1.43□□□□□ -2.18
SWI4YER111C AIM6Q07716 390 aa1.43□□□□□ -2.18
SWI4YER111C IZH3Q07959 543 aa1.43□□□□□ -2.18
SWI4YER111C TGS1Q12052 315 aa1.43□□□□□ -2.18
SWI4YER111C SWT1Q12104 458 aa1.43□□□□□ -2.18
SWI4YER111C LAS17Q12446 633 aa1.43□□□□□ -2.18
SWI4YER111C SEM1O94742 89 aa1.43□□□□□ -2.18
SWI4YER111C TUB2P02557 457 aaKnown RBP1.43□□□□□ -2.18
SWI4YER111C GCN4P03069 281 aa1.43□□□□□ -2.18
SWI4YER111C MET8P15807 274 aa1.43□□□□□ -2.18
SWI4YER111C PRE10P21242 288 aaKnown RBP RIP-Chip data1.43□□□□□ -2.18not detected
SWI4YER111C VPS34P22543 875 aa1.43□□□□□ -2.18
SWI4YER111C YCK1P23291 538 aa1.43□□□□□ -2.18
SWI4YER111C URK1P27515 501 aa1.43□□□□□ -2.18
SWI4YER111C CDC15P27636 974 aa1.43□□□□□ -2.18
SWI4YER111C VMA8P32610 256 aaKnown RBP1.43□□□□□ -2.18
SWI4YER111C PEX5P35056 612 aa1.43□□□□□ -2.18
SWI4YER111C MTH1P35198 433 aa1.43□□□□□ -2.18
SWI4YER111C BYE1P36106 594 aa1.43□□□□□ -2.18
SWI4YER111C TDP1P38319 544 aa1.43□□□□□ -2.18
SWI4YER111C YBR225WP38321 900 aa1.43□□□□□ -2.18
SWI4YER111C PSD1P39006 500 aa1.43□□□□□ -2.18
SWI4YER111C ARG2P40360 574 aa1.43□□□□□ -2.18
SWI4YER111C UPF3P48412 387 aaKnown RBP1.43□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 19 ms