RNA–Protein interactions for RNA: YDR379C-A

SDH6, Transcript of Mitochondrial protein involved in assembly of succinate dehydrogenase, yeastyeast

Gene SDH6, Length 240 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDH6YDR379C-A THI3Q07471 609 aa1.06□□□□□ -2.24
SDH6YDR379C-A PSR2Q07949 397 aa1.06□□□□□ -2.24
SDH6YDR379C-A MCH4Q08268 501 aa1.06□□□□□ -2.24
SDH6YDR379C-A GUK1P15454 187 aaKnown RBP1.05□□□□□ -2.24
SDH6YDR379C-A PRS1P32895 427 aaKnown RBP1.05□□□□□ -2.24
SDH6YDR379C-A YGL039WP53183 348 aaKnown RBP1.05□□□□□ -2.24
SDH6YDR379C-A PIG1Q06216 648 aa1.05□□□□□ -2.24
SDH6YDR379C-A PTC6P25646 442 aa1.04□□□□□ -2.24
SDH6YDR379C-A RMA1P36001 430 aaKnown RBP1.04□□□□□ -2.24
SDH6YDR379C-A VBA2P38358 474 aaKnown RBP1.04□□□□□ -2.24
SDH6YDR379C-A SWF1Q04629 336 aa1.04□□□□□ -2.24
SDH6YDR379C-A TMC1Q08422 150 aaPredicted RBP1.04□□□□□ -2.24
SDH6YDR379C-A FRE3Q08905 711 aa1.04□□□□□ -2.24
SDH6YDR379C-A YIR014WP40570 242 aa1.03□□□□□ -2.24
SDH6YDR379C-A CDC1P40986 491 aa1.03□□□□□ -2.24
SDH6YDR379C-A YJL132WP47014 750 aa1.03□□□□□ -2.24
SDH6YDR379C-A GDH1P07262 454 aaKnown RBP1.02□□□□□ -2.25
SDH6YDR379C-A PGI1P12709 554 aaKnown RBP1.02□□□□□ -2.25
SDH6YDR379C-A YCR061WP25639 631 aa1.02□□□□□ -2.25
SDH6YDR379C-A PPG1P32838 368 aa1.02□□□□□ -2.25
SDH6YDR379C-A LNP1P38878 278 aa1.02□□□□□ -2.25
SDH6YDR379C-A ASK10P48361 1146 aa1.02□□□□□ -2.25
SDH6YDR379C-A YPR003CP53394 754 aa1.02□□□□□ -2.25
SDH6YDR379C-A TDA3P38758 523 aa1.01□□□□□ -2.25
SDH6YDR379C-A TIS11P47977 285 aa1.01□□□□□ -2.25
SDH6YDR379C-A SNU71P53207 620 aaKnown RBP1.01□□□□□ -2.25
SDH6YDR379C-A RNH70P53331 553 aa1.01□□□□□ -2.25
SDH6YDR379C-A YNL234WP53857 426 aa1.01□□□□□ -2.25
SDH6YDR379C-A SQS1P53866 767 aaKnown RBP1.01□□□□□ -2.25
SDH6YDR379C-A GUD1Q07729 489 aa1.01□□□□□ -2.25
SDH6YDR379C-A YPL191CQ08930 360 aa1.01□□□□□ -2.25
SDH6YDR379C-A LEA1Q08963 238 aaPredicted RBP1.01□□□□□ -2.25
SDH6YDR379C-A GLN3P18494 730 aa1□□□□□ -2.25
SDH6YDR379C-A SWC3P31376 625 aa1□□□□□ -2.25
SDH6YDR379C-A PDR3P33200 976 aa1□□□□□ -2.25
SDH6YDR379C-A PAM1P37304 830 aaKnown RBP1□□□□□ -2.25
SDH6YDR379C-A YPK3P38070 525 aa1□□□□□ -2.25
SDH6YDR379C-A CHZ1P40019 153 aaPredicted RBP1□□□□□ -2.25
SDH6YDR379C-A YDL186WP48568 277 aa1□□□□□ -2.25
SDH6YDR379C-A SDT1P53078 280 aa1□□□□□ -2.25
SDH6YDR379C-A YCR006CP25350 157 aa0.99□□□□□ -2.25
SDH6YDR379C-A SEC65P29478 273 aa0.99□□□□□ -2.25
SDH6YDR379C-A AGA1P32323 725 aa0.99□□□□□ -2.25
SDH6YDR379C-A MF(ALPHA)2P32435 120 aa0.99□□□□□ -2.25
SDH6YDR379C-A YBP1P38315 674 aa0.99□□□□□ -2.25
SDH6YDR379C-A LEU5P38702 357 aa0.99□□□□□ -2.25
SDH6YDR379C-A UTP21Q06078 939 aaPredicted RBP0.99□□□□□ -2.25
SDH6YDR379C-A KGD2P19262 463 aaPredicted RBP0.98□□□□□ -2.25
SDH6YDR379C-A LOS1P33418 1100 aaPredicted RBP0.98□□□□□ -2.25
SDH6YDR379C-A COS12P53053 380 aa0.98□□□□□ -2.25
SDH6YDR379C-A RSF1Q05043 376 aa0.98□□□□□ -2.25
SDH6YDR379C-A MHR1Q06630 226 aa0.98□□□□□ -2.25
SDH6YDR379C-A RPS21BQ3E754 87 aaKnown RBP0.98□□□□□ -2.25
SDH6YDR379C-A STI1P15705 589 aaKnown RBP RIP-Chip data0.97□□□□□ -2.25not detected
SDH6YDR379C-A ARO9P38840 513 aaPredicted RBP0.97□□□□□ -2.25
SDH6YDR379C-A VID28P40547 921 aa0.97□□□□□ -2.25
SDH6YDR379C-A RET2P43621 546 aa0.97□□□□□ -2.25
SDH6YDR379C-A CDC26P14724 124 aa0.96□□□□□ -2.26
SDH6YDR379C-A YJL213WP40896 331 aa0.96□□□□□ -2.26
SDH6YDR379C-A NSE3Q05541 303 aa0.96□□□□□ -2.26
SDH6YDR379C-A FPR4Q06205 392 aaPredicted RBP0.96□□□□□ -2.26
SDH6YDR379C-A CDC53Q12018 815 aaKnown RBP0.96□□□□□ -2.26
SDH6YDR379C-A MRS3P10566 314 aa0.95□□□□□ -2.26
SDH6YDR379C-A YJL068CP40363 299 aa0.95□□□□□ -2.26
SDH6YDR379C-A UGO1Q03327 502 aa0.95□□□□□ -2.26
SDH6YDR379C-A HEL2Q05580 639 aaKnown RBP0.95□□□□□ -2.26
SDH6YDR379C-A FAP7Q12055 197 aaPredicted RBP0.95□□□□□ -2.26
SDH6YDR379C-A MSH2P25847 964 aa0.94□□□□□ -2.26
SDH6YDR379C-A DGR2P32330 852 aa0.94□□□□□ -2.26
SDH6YDR379C-A TIM23P32897 222 aa0.94□□□□□ -2.26
SDH6YDR379C-A RPF2P36160 344 aaKnown RBP0.94□□□□□ -2.26
SDH6YDR379C-A DIM1P41819 318 aaKnown RBP0.94□□□□□ -2.26
SDH6YDR379C-A PEF1P53238 335 aa0.94□□□□□ -2.26
SDH6YDR379C-A MDR1P53258 950 aa0.94□□□□□ -2.26
SDH6YDR379C-A YMR178WQ03219 274 aaKnown RBP0.94□□□□□ -2.26
SDH6YDR379C-A TAF7Q05021 590 aa0.94□□□□□ -2.26
SDH6YDR379C-A YLR152CP54072 576 aa0.93□□□□□ -2.26
SDH6YDR379C-A RPN4Q03465 531 aa0.93□□□□□ -2.26
SDH6YDR379C-A STP3Q05937 343 aa0.93□□□□□ -2.26
SDH6YDR379C-A YLR125WQ12138 136 aa0.93□□□□□ -2.26
SDH6YDR379C-A GPA1P08539 472 aa0.92□□□□□ -2.26
SDH6YDR379C-A AEP2P22136 580 aa0.92□□□□□ -2.26
SDH6YDR379C-A SPR1P32603 445 aa0.92□□□□□ -2.26
SDH6YDR379C-A TIF4631P39935 952 aaKnown RBP0.92□□□□□ -2.26
SDH6YDR379C-A IAH1P41734 238 aa0.92□□□□□ -2.26
SDH6YDR379C-A ORC1P54784 914 aaPredicted RBP0.92□□□□□ -2.26
SDH6YDR379C-A YLR001CQ07895 862 aa0.92□□□□□ -2.26
SDH6YDR379C-A BI3Q9ZZW7 517 aa0.92□□□□□ -2.26
SDH6YDR379C-A PHO8P11491 566 aa0.91□□□□□ -2.26
SDH6YDR379C-A POL3P15436 1097 aa0.91□□□□□ -2.26
SDH6YDR379C-A FAT1P38225 669 aa0.91□□□□□ -2.26
SDH6YDR379C-A TIF5P38431 405 aaKnown RBP0.91□□□□□ -2.26
SDH6YDR379C-A STB5P38699 743 aa0.91□□□□□ -2.26
SDH6YDR379C-A NUP82P40368 713 aa0.91□□□□□ -2.26
SDH6YDR379C-A BUD6P41697 788 aa0.91□□□□□ -2.26
SDH6YDR379C-A NNF1P47149 201 aa0.91□□□□□ -2.26
SDH6YDR379C-A EKI1Q03764 534 aa0.91□□□□□ -2.26
SDH6YDR379C-A MCP2Q06567 569 aa0.91□□□□□ -2.26
SDH6YDR379C-A YER145C-AA0A023PYF4 145 aa0.9□□□□□ -2.27
SDH6YDR379C-A MCK1P21965 375 aaKnown RBP0.9□□□□□ -2.27
Retrieved 100 of 5,963 RNA–protein pairs in 22.8 ms