RNA–Protein interactions for RNA: YDR079C-A

TFB5, Transcript of Component of RNA polymerase II general transcription factor TFIIH, yeastyeast

Gene TFB5, Length 219 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFB5YDR079C-A ATG33Q06485 197 aa0.47□□□□□ -2.33
TFB5YDR079C-A SSF2Q12153 453 aaPredicted RBP0.47□□□□□ -2.33
TFB5YDR079C-A GLN3P18494 730 aa0.46□□□□□ -2.34
TFB5YDR079C-A TIM54P47045 478 aa0.46□□□□□ -2.34
TFB5YDR079C-A NOP15P53927 220 aaPredicted RBP0.46□□□□□ -2.34
TFB5YDR079C-A SWF1Q04629 336 aa0.46□□□□□ -2.34
TFB5YDR079C-A YML053CQ04978 212 aa0.46□□□□□ -2.34
TFB5YDR079C-A RSF1Q05043 376 aa0.46□□□□□ -2.34
TFB5YDR079C-A THI3Q07471 609 aa0.46□□□□□ -2.34
TFB5YDR079C-A MCH4Q08268 501 aa0.46□□□□□ -2.34
TFB5YDR079C-A HMG2P12684 1045 aa0.45□□□□□ -2.34
TFB5YDR079C-A POL3P15436 1097 aa0.45□□□□□ -2.34
TFB5YDR079C-A CBP3P21560 335 aa0.45□□□□□ -2.34
TFB5YDR079C-A TIF5P38431 405 aaKnown RBP0.45□□□□□ -2.34
TFB5YDR079C-A YJL213WP40896 331 aa0.45□□□□□ -2.34
TFB5YDR079C-A AIM14P53109 570 aa0.45□□□□□ -2.34
TFB5YDR079C-A YDR415CQ04033 374 aaPredicted RBP0.45□□□□□ -2.34
TFB5YDR079C-A MDM12Q92328 271 aa0.45□□□□□ -2.34
TFB5YDR079C-A TUF1P02992 437 aaKnown RBP0.44□□□□□ -2.34
TFB5YDR079C-A SWI6P09959 803 aa0.44□□□□□ -2.34
TFB5YDR079C-A GUK1P15454 187 aaKnown RBP0.44□□□□□ -2.34
TFB5YDR079C-A IES1P43579 692 aa0.44□□□□□ -2.34
TFB5YDR079C-A FRE3Q08905 711 aa0.44□□□□□ -2.34
TFB5YDR079C-A YPK3P38070 525 aa0.43□□□□□ -2.34
TFB5YDR079C-A YMR178WQ03219 274 aaKnown RBP0.43□□□□□ -2.34
TFB5YDR079C-A YDL242WQ07746 117 aa0.43□□□□□ -2.34
TFB5YDR079C-A ILV2P07342 687 aaKnown RBP0.42□□□□□ -2.34
TFB5YDR079C-A PTC6P25646 442 aa0.42□□□□□ -2.34
TFB5YDR079C-A PDR3P33200 976 aa0.42□□□□□ -2.34
TFB5YDR079C-A DIM1P41819 318 aaKnown RBP0.42□□□□□ -2.34
TFB5YDR079C-A RNH70P53331 553 aa0.42□□□□□ -2.34
TFB5YDR079C-A GSY1P23337 708 aa0.41□□□□□ -2.34
TFB5YDR079C-A YKL097CP34245 136 aa0.41□□□□□ -2.34
TFB5YDR079C-A AGP2P38090 596 aa0.41□□□□□ -2.34
TFB5YDR079C-A VBA2P38358 474 aaKnown RBP0.41□□□□□ -2.34
TFB5YDR079C-A PCM1P38628 557 aaKnown RBP0.41□□□□□ -2.34
TFB5YDR079C-A BFA1P47113 574 aa0.41□□□□□ -2.34
TFB5YDR079C-A BTN2P53286 410 aa0.41□□□□□ -2.34
TFB5YDR079C-A YPR003CP53394 754 aa0.41□□□□□ -2.34
TFB5YDR079C-A YPL191CQ08930 360 aa0.41□□□□□ -2.34
TFB5YDR079C-A LEA1Q08963 238 aaPredicted RBP0.41□□□□□ -2.34
TFB5YDR079C-A KGD2P19262 463 aaPredicted RBP0.4□□□□□ -2.35
TFB5YDR079C-A ISY1P21374 235 aaPredicted RBP0.4□□□□□ -2.35
TFB5YDR079C-A COS10P52924 374 aa0.4□□□□□ -2.35
TFB5YDR079C-A UTP21Q06078 939 aaPredicted RBP0.4□□□□□ -2.35
TFB5YDR079C-A WRS1Q12109 432 aaKnown RBP0.4□□□□□ -2.35
TFB5YDR079C-A GIN4Q12263 1142 aa0.4□□□□□ -2.35
TFB5YDR079C-A YPS3Q12303 508 aa0.4□□□□□ -2.35
TFB5YDR079C-A RPL15AP05748 204 aaKnown RBP0.39□□□□□ -2.35
TFB5YDR079C-A MCK1P21965 375 aaKnown RBP0.39□□□□□ -2.35
TFB5YDR079C-A MEF1P25039 761 aa0.39□□□□□ -2.35
TFB5YDR079C-A YNL234WP53857 426 aa0.39□□□□□ -2.35
TFB5YDR079C-A HCR1Q05775 265 aaKnown RBP0.39□□□□□ -2.35
TFB5YDR079C-A PCL2P25693 308 aa0.38□□□□□ -2.35
TFB5YDR079C-A YJL068CP40363 299 aa0.38□□□□□ -2.35
TFB5YDR079C-A SEC12P11655 471 aa0.37□□□□□ -2.35
TFB5YDR079C-A MRP21P38175 177 aa0.37□□□□□ -2.35
TFB5YDR079C-A RTS2P40962 232 aa0.37□□□□□ -2.35
TFB5YDR079C-A IAH1P41734 238 aa0.37□□□□□ -2.35
TFB5YDR079C-A FET5P43561 622 aa0.37□□□□□ -2.35
TFB5YDR079C-A RFM1Q12192 310 aa0.37□□□□□ -2.35
TFB5YDR079C-A NUM1Q00402 2748 aa0.37□□□□□ -2.35
TFB5YDR079C-A GPA1P08539 472 aa0.36□□□□□ -2.35
TFB5YDR079C-A SGF29P25554 259 aa0.36□□□□□ -2.35
TFB5YDR079C-A DSS1P39112 969 aa0.36□□□□□ -2.35
TFB5YDR079C-A RPH1P39956 796 aa0.36□□□□□ -2.35
TFB5YDR079C-A YJL049WP47048 450 aa0.36□□□□□ -2.35
TFB5YDR079C-A UBX6P47049 396 aa0.36□□□□□ -2.35
TFB5YDR079C-A CTT1P06115 562 aa0.35□□□□□ -2.35
TFB5YDR079C-A RMA1P36001 430 aaKnown RBP0.35□□□□□ -2.35
TFB5YDR079C-A ARO9P38840 513 aaPredicted RBP0.35□□□□□ -2.35
TFB5YDR079C-A IDP2P41939 412 aa0.35□□□□□ -2.35
TFB5YDR079C-A DNM1P54861 757 aa0.35□□□□□ -2.35
TFB5YDR079C-A ATG21Q02887 496 aa0.35□□□□□ -2.35
TFB5YDR079C-A EKI1Q03764 534 aa0.35□□□□□ -2.35
TFB5YDR079C-A YOL159CQ08300 171 aa0.35□□□□□ -2.35
TFB5YDR079C-A YCR006CP25350 157 aa0.34□□□□□ -2.36
TFB5YDR079C-A YIM1P28625 365 aa0.34□□□□□ -2.36
TFB5YDR079C-A ATS1P31386 333 aa0.34□□□□□ -2.36
TFB5YDR079C-A MF(ALPHA)2P32435 120 aa0.34□□□□□ -2.36
TFB5YDR079C-A MID2P36027 376 aa0.34□□□□□ -2.36
TFB5YDR079C-A STB5P38699 743 aa0.34□□□□□ -2.36
TFB5YDR079C-A HST1P53685 503 aa0.34□□□□□ -2.36
TFB5YDR079C-A FPR4Q06205 392 aaPredicted RBP0.34□□□□□ -2.36
TFB5YDR079C-A YRM1Q12340 786 aa0.34□□□□□ -2.36
TFB5YDR079C-A YME1P32795 747 aa0.33□□□□□ -2.36
TFB5YDR079C-A YFR016CP43597 1233 aaKnown RBP0.33□□□□□ -2.36
TFB5YDR079C-A ERP1Q05359 219 aaKnown RBP0.33□□□□□ -2.36
TFB5YDR079C-A SET6Q12529 373 aa0.33□□□□□ -2.36
TFB5YDR079C-A RRP12Q12754 1228 aaKnown RBP0.33□□□□□ -2.36
TFB5YDR079C-A SFL1P20134 766 aa0.32□□□□□ -2.36
TFB5YDR079C-A HCS1P34243 683 aa0.32□□□□□ -2.36
TFB5YDR079C-A RFS1P38234 210 aaKnown RBP0.32□□□□□ -2.36
TFB5YDR079C-A ERC1P38767 581 aa0.32□□□□□ -2.36
TFB5YDR079C-A LNP1P38878 278 aa0.32□□□□□ -2.36
TFB5YDR079C-A GUF1P46943 645 aa0.32□□□□□ -2.36
TFB5YDR079C-A COS12P53053 380 aa0.32□□□□□ -2.36
TFB5YDR079C-A TSA2Q04120 196 aa0.32□□□□□ -2.36
TFB5YDR079C-A MCP2Q06567 569 aa0.32□□□□□ -2.36
TFB5YDR079C-A HRT3Q12347 344 aa0.32□□□□□ -2.36
Retrieved 100 of 5,963 RNA–protein pairs in 49.8 ms