RNA–Protein interactions for RNA: YDR001C

NTH1, Transcript of Neutral trehalase, degrades trehalose, yeast

Gene NTH1, Length 2,256 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NTH1	YDR001C	PPN1	Q04119	674 aa		4.24	□□□□□ -1.73
NTH1	YDR001C	GCD2	P12754	651 aa	Predicted RBP	4.24	□□□□□ -1.73
NTH1	YDR001C	TUP1	P16649	713 aa		4.24	□□□□□ -1.73
NTH1	YDR001C	RNQ1	P25367	405 aa		4.24	□□□□□ -1.73
NTH1	YDR001C	PDB1	P32473	366 aa	Known RBP	4.24	□□□□□ -1.73
NTH1	YDR001C	GCN20	P43535	752 aa	Known RBP	4.24	□□□□□ -1.73
NTH1	YDR001C	MUP1	P50276	574 aa		4.24	□□□□□ -1.73
NTH1	YDR001C	YGL242C	P53066	181 aa		4.24	□□□□□ -1.73
NTH1	YDR001C	MCM6	P53091	1017 aa	Known RBP	4.24	□□□□□ -1.73
NTH1	YDR001C	PRP43	P53131	767 aa	Known RBP	4.24	□□□□□ -1.73
NTH1	YDR001C	YNL247W	P53852	767 aa	Known RBP	4.24	□□□□□ -1.73
NTH1	YDR001C	TRS130	Q03660	1102 aa		4.24	□□□□□ -1.73
NTH1	YDR001C	SFH1	Q06168	426 aa		4.24	□□□□□ -1.73
NTH1	YDR001C	ATG26	Q06321	1198 aa		4.24	□□□□□ -1.73
NTH1	YDR001C	YCG1	Q06680	1035 aa		4.24	□□□□□ -1.73
NTH1	YDR001C	SDH5	Q08230	162 aa		4.24	□□□□□ -1.73
NTH1	YDR001C	DIA2	Q08496	732 aa	Predicted RBP	4.24	□□□□□ -1.73
NTH1	YDR001C	URA3	P03962	267 aa		4.23	□□□□□ -1.73
NTH1	YDR001C	RPS9B	P05755	195 aa	Known RBP	4.23	□□□□□ -1.73
NTH1	YDR001C	HMG2	P12684	1045 aa		4.23	□□□□□ -1.73
NTH1	YDR001C	ECM4	P36156	370 aa		4.23	□□□□□ -1.73
NTH1	YDR001C	STT3	P39007	718 aa	Known RBP	4.23	□□□□□ -1.73
NTH1	YDR001C	YIR042C	P40586	236 aa		4.23	□□□□□ -1.73
NTH1	YDR001C	VTC3	Q02725	835 aa		4.23	□□□□□ -1.73
NTH1	YDR001C	DLT1	Q04216	342 aa		4.23	□□□□□ -1.73
NTH1	YDR001C	YLR358C	O13565	187 aa		4.23	□□□□□ -1.73
NTH1	YDR001C	SUI3	P09064	285 aa	Known RBP	4.23	□□□□□ -1.73
NTH1	YDR001C	MBR1	P23493	339 aa		4.23	□□□□□ -1.73
NTH1	YDR001C	RPN2	P32565	945 aa	Known RBP	4.23	□□□□□ -1.73
NTH1	YDR001C	ECM32	P32644	1121 aa	Known RBP	4.23	□□□□□ -1.73
NTH1	YDR001C	BCS1	P32839	456 aa		4.23	□□□□□ -1.73
NTH1	YDR001C	BEM3	P32873	1128 aa		4.23	□□□□□ -1.73
NTH1	YDR001C	EHT1	P38295	451 aa		4.23	□□□□□ -1.73
NTH1	YDR001C	ELO3	P40319	345 aa		4.23	□□□□□ -1.73
NTH1	YDR001C	YIL001W	P40560	513 aa		4.23	□□□□□ -1.73
NTH1	YDR001C	TFG2	P41896	400 aa	Predicted RBP	4.23	□□□□□ -1.73
NTH1	YDR001C	YJR079W	P47126	109 aa		4.23	□□□□□ -1.73
NTH1	YDR001C	MNN10	P50108	393 aa	Known RBP	4.23	□□□□□ -1.73
NTH1	YDR001C	FMP30	Q02883	468 aa		4.23	□□□□□ -1.73
NTH1	YDR001C	YML119W	Q03208	357 aa		4.23	□□□□□ -1.73
NTH1	YDR001C	YKU80	Q04437	629 aa		4.23	□□□□□ -1.73
NTH1	YDR001C	MMR1	Q06324	491 aa		4.23	□□□□□ -1.73
NTH1	YDR001C	ATG23	Q06671	453 aa		4.23	□□□□□ -1.73
NTH1	YDR001C	YFT2	Q06676	274 aa		4.23	□□□□□ -1.73
NTH1	YDR001C	DDP1	Q99321	188 aa	Known RBP	4.23	□□□□□ -1.73
NTH1	YDR001C	GFA1	P14742	717 aa	Known RBP	4.22	□□□□□ -1.73
NTH1	YDR001C	FEN2	P25621	512 aa	Known RBP	4.22	□□□□□ -1.73
NTH1	YDR001C	MSS1	P32559	526 aa	Predicted RBP	4.22	□□□□□ -1.73
NTH1	YDR001C	NFU1	P32860	256 aa		4.22	□□□□□ -1.73
NTH1	YDR001C	COS111	P38308	924 aa		4.22	□□□□□ -1.73
NTH1	YDR001C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
NTH1	YDR001C	TRS85	P46944	698 aa		4.22	□□□□□ -1.73
NTH1	YDR001C	APT1	P49435	187 aa	Known RBP	4.22	□□□□□ -1.73
NTH1	YDR001C	SHE10	P53075	577 aa		4.22	□□□□□ -1.73
NTH1	YDR001C	BTN2	P53286	410 aa		4.22	□□□□□ -1.73
NTH1	YDR001C	ARC35	P53731	342 aa	Known RBP	4.22	□□□□□ -1.73
NTH1	YDR001C	DSL1	P53847	754 aa		4.22	□□□□□ -1.73
NTH1	YDR001C	BET4	Q00618	327 aa		4.22	□□□□□ -1.73
NTH1	YDR001C	TRI1	Q05024	226 aa		4.22	□□□□□ -1.73
NTH1	YDR001C	RTT109	Q07794	436 aa		4.22	□□□□□ -1.73
NTH1	YDR001C	SSP2	Q08646	371 aa		4.22	□□□□□ -1.73
NTH1	YDR001C	VMR1	P38735	1592 aa		4.22	□□□□□ -1.73
NTH1	YDR001C	ADE6	P38972	1358 aa	Known RBP	4.21	□□□□□ -1.73
NTH1	YDR001C	RPL19A	P0CX82	189 aa	Known RBP	4.21	□□□□□ -1.73
NTH1	YDR001C	RPL19B	P0CX83	189 aa	Predicted RBP	4.21	□□□□□ -1.73
NTH1	YDR001C	CAF20	P12962	161 aa	Known RBP	4.21	□□□□□ -1.73
NTH1	YDR001C	NCP1	P16603	691 aa	Known RBP	4.21	□□□□□ -1.73
NTH1	YDR001C	TYR1	P20049	452 aa		4.21	□□□□□ -1.73
NTH1	YDR001C	MCM3	P24279	971 aa	Known RBP	4.21	□□□□□ -1.73
NTH1	YDR001C	CSE1	P33307	960 aa		4.21	□□□□□ -1.73
NTH1	YDR001C	PRX1	P34227	261 aa	Known RBP	4.21	□□□□□ -1.73
NTH1	YDR001C	PIH1	P38768	344 aa		4.21	□□□□□ -1.73
NTH1	YDR001C	BCD1	P38772	366 aa		4.21	□□□□□ -1.73
NTH1	YDR001C	PUG1	P40100	303 aa		4.21	□□□□□ -1.73
NTH1	YDR001C	YIL077C	P40508	320 aa		4.21	□□□□□ -1.73
NTH1	YDR001C	TAH11	P47112	604 aa		4.21	□□□□□ -1.73
NTH1	YDR001C	UBC11	P52492	156 aa		4.21	□□□□□ -1.73
NTH1	YDR001C	CPR6	P53691	371 aa	Known RBP	4.21	□□□□□ -1.73
NTH1	YDR001C	SQS1	P53866	767 aa	Known RBP	4.21	□□□□□ -1.73
NTH1	YDR001C	ACS1	Q01574	713 aa		4.21	□□□□□ -1.73
NTH1	YDR001C	RRP9	Q06506	573 aa	Known RBP	4.21	□□□□□ -1.73
NTH1	YDR001C	BUD3	P25558	1636 aa		4.21	□□□□□ -1.74
NTH1	YDR001C	FAR1	P21268	830 aa		4.21	□□□□□ -1.74
NTH1	YDR001C	CCT3	P39077	534 aa	Known RBP	4.21	□□□□□ -1.74
NTH1	YDR001C	CAJ1	P39101	391 aa		4.21	□□□□□ -1.74
NTH1	YDR001C	MRX1	P40050	688 aa		4.21	□□□□□ -1.74
NTH1	YDR001C	RFX1	P48743	811 aa		4.21	□□□□□ -1.74
NTH1	YDR001C	PHO23	P50947	330 aa		4.21	□□□□□ -1.74
NTH1	YDR001C	LSG1	P53145	640 aa	Known RBP	4.21	□□□□□ -1.74
NTH1	YDR001C	SPO1	P53541	631 aa		4.21	□□□□□ -1.74
NTH1	YDR001C	SPN1	Q06505	410 aa	Predicted RBP	4.21	□□□□□ -1.74
NTH1	YDR001C	IRC13	Q08630	104 aa		4.21	□□□□□ -1.74
NTH1	YDR001C	RPO41	P13433	1351 aa	Known RBP	4.2	□□□□□ -1.74
NTH1	YDR001C	PMA1	P05030	918 aa	Known RBP	4.2	□□□□□ -1.74
NTH1	YDR001C	CDC16	P09798	840 aa		4.2	□□□□□ -1.74
NTH1	YDR001C	YMR085W	P0CF18	432 aa		4.2	□□□□□ -1.74
NTH1	YDR001C	SSH4	P32343	579 aa		4.2	□□□□□ -1.74
NTH1	YDR001C	PCH2	P38126	564 aa		4.2	□□□□□ -1.74
NTH1	YDR001C	YLF2	P38746	405 aa		4.2	□□□□□ -1.74
NTH1	YDR001C	ARB1	P40024	610 aa	Known RBP	4.2	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 8.8 ms