RNA–Protein interactions for RNA: YDL201W

TRM8, Transcript of Noncatalytic subunit of a tRNA methyltransferase complex, yeast

Gene TRM8, Length 861 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRM8	YDL201W	RRN5	Q02983	363 aa		4.99	□□□□□ -1.61
TRM8	YDL201W	FDC1	Q03034	503 aa		4.99	□□□□□ -1.61
TRM8	YDL201W	GYL1	Q04322	720 aa		4.99	□□□□□ -1.61
TRM8	YDL201W	ERB1	Q04660	807 aa	Known RBP	4.99	□□□□□ -1.61
TRM8	YDL201W	RSF1	Q05043	376 aa		4.99	□□□□□ -1.61
TRM8	YDL201W	HRQ1	Q05549	1077 aa		4.99	□□□□□ -1.61
TRM8	YDL201W	CRD1	Q07560	283 aa		4.99	□□□□□ -1.61
TRM8	YDL201W	AVO1	Q08236	1176 aa		4.99	□□□□□ -1.61
TRM8	YDL201W	RSB1	Q08417	382 aa		4.99	□□□□□ -1.61
TRM8	YDL201W	TGL5	Q12043	749 aa		4.99	□□□□□ -1.61
TRM8	YDL201W	RTC5	Q12108	567 aa	Known RBP	4.99	□□□□□ -1.61
TRM8	YDL201W	NMD4	Q12129	218 aa		4.99	□□□□□ -1.61
TRM8	YDL201W	HAL9	Q12180	1030 aa		4.99	□□□□□ -1.61
TRM8	YDL201W	SNF2	P22082	1703 aa		4.98	□□□□□ -1.61
TRM8	YDL201W	CLB1	P24868	471 aa		4.98	□□□□□ -1.61
TRM8	YDL201W	RRP43	P25359	394 aa	Predicted RBP	4.98	□□□□□ -1.61
TRM8	YDL201W	RRP7	P25368	297 aa	Predicted RBP	4.98	□□□□□ -1.61
TRM8	YDL201W	PEP3	P27801	918 aa		4.98	□□□□□ -1.61
TRM8	YDL201W	GCS1	P35197	352 aa		4.98	□□□□□ -1.61
TRM8	YDL201W	DAD2	P36162	133 aa		4.98	□□□□□ -1.61
TRM8	YDL201W	GDT1	P38301	280 aa	Predicted RBP	4.98	□□□□□ -1.61
TRM8	YDL201W	ATF1	P40353	525 aa		4.98	□□□□□ -1.61
TRM8	YDL201W	YIL161W	P40449	235 aa	Known RBP	4.98	□□□□□ -1.61
TRM8	YDL201W	SKP2	P42843	763 aa		4.98	□□□□□ -1.61
TRM8	YDL201W	SIP4	P46954	829 aa		4.98	□□□□□ -1.61
TRM8	YDL201W	SPO1	P53541	631 aa		4.98	□□□□□ -1.61
TRM8	YDL201W	ALF1	P53904	254 aa		4.98	□□□□□ -1.61
TRM8	YDL201W	NOP15	P53927	220 aa	Predicted RBP	4.98	□□□□□ -1.61
TRM8	YDL201W	TAP42	Q04372	366 aa		4.98	□□□□□ -1.61
TRM8	YDL201W	LUC7	Q07508	261 aa	Predicted RBP	4.98	□□□□□ -1.61
TRM8	YDL201W	KEL3	Q08979	651 aa	Predicted RBP	4.98	□□□□□ -1.61
TRM8	YDL201W	USO1	P25386	1790 aa		4.98	□□□□□ -1.61
TRM8	YDL201W	RPS9A	O13516	197 aa	Known RBP	4.97	□□□□□ -1.61
TRM8	YDL201W	YLR302C	O13544	120 aa		4.97	□□□□□ -1.61
TRM8	YDL201W	HSF1	P10961	833 aa		4.97	□□□□□ -1.61
TRM8	YDL201W	PCK1	P10963	549 aa		4.97	□□□□□ -1.61
TRM8	YDL201W	GLN4	P13188	809 aa	Known RBP	4.97	□□□□□ -1.61
TRM8	YDL201W	KAR3	P17119	729 aa		4.97	□□□□□ -1.61
TRM8	YDL201W	THR1	P17423	357 aa	Known RBP	4.97	□□□□□ -1.61
TRM8	YDL201W	HNM1	P19807	563 aa		4.97	□□□□□ -1.61
TRM8	YDL201W	GRR1	P24814	1151 aa		4.97	□□□□□ -1.61
TRM8	YDL201W	POT1	P27796	417 aa	Known RBP RIP-Chip data	4.97	□□□□□ -1.61	not detected
TRM8	YDL201W	MSP1	P28737	362 aa		4.97	□□□□□ -1.61
TRM8	YDL201W	YEL043W	P32618	956 aa		4.97	□□□□□ -1.61
TRM8	YDL201W	SSZ1	P38788	538 aa	Known RBP	4.97	□□□□□ -1.61
TRM8	YDL201W	BEM4	P39011	633 aa		4.97	□□□□□ -1.61
TRM8	YDL201W	BUD16	P39988	312 aa		4.97	□□□□□ -1.61
TRM8	YDL201W	LTP1	P40347	161 aa		4.97	□□□□□ -1.61
TRM8	YDL201W	GCD10	P41814	478 aa		4.97	□□□□□ -1.61
TRM8	YDL201W	CUL3	P53202	744 aa		4.97	□□□□□ -1.61
TRM8	YDL201W	ORC4	P54791	529 aa		4.97	□□□□□ -1.61
TRM8	YDL201W	YMR210W	Q03649	449 aa		4.97	□□□□□ -1.61
TRM8	YDL201W	YAP6	Q03935	383 aa		4.97	□□□□□ -1.61
TRM8	YDL201W	RBA50	Q04418	439 aa		4.97	□□□□□ -1.61
TRM8	YDL201W	RCO1	Q04779	684 aa		4.97	□□□□□ -1.61
TRM8	YDL201W	CRR1	Q05790	422 aa		4.97	□□□□□ -1.61
TRM8	YDL201W	YPR196W	Q06595	470 aa		4.97	□□□□□ -1.61
TRM8	YDL201W	AAD4	Q07747	329 aa		4.97	□□□□□ -1.61
TRM8	YDL201W	ALG6	Q12001	544 aa	Known RBP	4.97	□□□□□ -1.61
TRM8	YDL201W	ADE6	P38972	1358 aa	Known RBP	4.96	□□□□□ -1.62
TRM8	YDL201W	RPS17A	P02407	136 aa	Known RBP	4.96	□□□□□ -1.62
TRM8	YDL201W	NOT3	P06102	836 aa	Known RBP	4.96	□□□□□ -1.62
TRM8	YDL201W	RPS17B	P14127	136 aa	Known RBP	4.96	□□□□□ -1.62
TRM8	YDL201W	CDC26	P14724	124 aa		4.96	□□□□□ -1.62
TRM8	YDL201W	PHO84	P25297	587 aa	Known RBP	4.96	□□□□□ -1.62
TRM8	YDL201W	MF(ALPHA)2	P32435	120 aa		4.96	□□□□□ -1.62
TRM8	YDL201W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.96	□□□□□ -1.62	not detected
TRM8	YDL201W	YKL151C	P36059	337 aa		4.96	□□□□□ -1.62
TRM8	YDL201W	STB6	P36085	766 aa		4.96	□□□□□ -1.62
TRM8	YDL201W	UGA2	P38067	497 aa		4.96	□□□□□ -1.62
TRM8	YDL201W	YBR138C	P38277	524 aa		4.96	□□□□□ -1.62
TRM8	YDL201W	OTU2	P38747	307 aa	Known RBP	4.96	□□□□□ -1.62
TRM8	YDL201W	RRT14	P40470	206 aa		4.96	□□□□□ -1.62
TRM8	YDL201W	IST3	P40565	148 aa	Predicted RBP	4.96	□□□□□ -1.62
TRM8	YDL201W	MRX6	P48564	524 aa		4.96	□□□□□ -1.62
TRM8	YDL201W	HFM1	P51979	1187 aa		4.96	□□□□□ -1.62
TRM8	YDL201W	TOF1	P53840	1238 aa		4.96	□□□□□ -1.62
TRM8	YDL201W	VTC3	Q02725	835 aa		4.96	□□□□□ -1.62
TRM8	YDL201W	ECM22	Q05958	814 aa	Predicted RBP	4.96	□□□□□ -1.62
TRM8	YDL201W	DBP9	Q06218	594 aa	Known RBP	4.96	□□□□□ -1.62
TRM8	YDL201W	HRK1	Q08732	759 aa	Known RBP	4.96	□□□□□ -1.62
TRM8	YDL201W	MDY2	Q12285	212 aa		4.96	□□□□□ -1.62
TRM8	YDL201W	GRX6	Q12438	231 aa		4.96	□□□□□ -1.62
TRM8	YDL201W	YIL002W-A	Q3E7Z5	69 aa		4.96	□□□□□ -1.62
TRM8	YDL201W	PRC1	P00729	532 aa		4.95	□□□□□ -1.62
TRM8	YDL201W	BIK1	P11709	440 aa		4.95	□□□□□ -1.62
TRM8	YDL201W	LAT1	P12695	482 aa	Known RBP	4.95	□□□□□ -1.62
TRM8	YDL201W	CBS1	P14066	229 aa		4.95	□□□□□ -1.62
TRM8	YDL201W	CMP2	P14747	604 aa		4.95	□□□□□ -1.62
TRM8	YDL201W	PET123	P17558	318 aa		4.95	□□□□□ -1.62
TRM8	YDL201W	RIT1	P23796	513 aa		4.95	□□□□□ -1.62
TRM8	YDL201W	VPS17	P32913	551 aa		4.95	□□□□□ -1.62
TRM8	YDL201W	PPQ1	P32945	549 aa		4.95	□□□□□ -1.62
TRM8	YDL201W	THI80	P35202	319 aa		4.95	□□□□□ -1.62
TRM8	YDL201W	UBP11	P36026	717 aa		4.95	□□□□□ -1.62
TRM8	YDL201W	SET3	P36124	751 aa		4.95	□□□□□ -1.62
TRM8	YDL201W	FLR1	P38124	548 aa		4.95	□□□□□ -1.62
TRM8	YDL201W	POA1	P38218	177 aa		4.95	□□□□□ -1.62
TRM8	YDL201W	SIF2	P38262	535 aa		4.95	□□□□□ -1.62
TRM8	YDL201W	GND1	P38720	489 aa	Known RBP	4.95	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms