RNA–Protein interactions for RNA: YDL047W

SIT4, Transcript of Type 2A-related serine-threonine phosphatase, yeastyeast

Gene SIT4, Length 936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIT4YDL047W YGR021WP53212 290 aa6.07□□□□□ -1.44
SIT4YDL047W SSL2Q00578 843 aa6.07□□□□□ -1.44
SIT4YDL047W IVY1Q04934 453 aa6.07□□□□□ -1.44
SIT4YDL047W TFB4Q12004 338 aa6.07□□□□□ -1.44
SIT4YDL047W OCA6Q12454 224 aa6.07□□□□□ -1.44
SIT4YDL047W RIP1P08067 215 aa6.06□□□□□ -1.44
SIT4YDL047W SPO12P17123 173 aa6.06□□□□□ -1.44
SIT4YDL047W YCR015CP25616 317 aa6.06□□□□□ -1.44
SIT4YDL047W MSP1P28737 362 aa6.06□□□□□ -1.44
SIT4YDL047W MEI4P29467 408 aa6.06□□□□□ -1.44
SIT4YDL047W AIM26P32858 118 aa6.06□□□□□ -1.44
SIT4YDL047W ELO3P40319 345 aa6.06□□□□□ -1.44
SIT4YDL047W ATM1P40416 690 aa6.06□□□□□ -1.44
SIT4YDL047W IST3P40565 148 aaPredicted RBP6.06□□□□□ -1.44
SIT4YDL047W TRF5P48561 642 aaKnown RBP6.06□□□□□ -1.44
SIT4YDL047W YGR127WP53275 312 aa6.06□□□□□ -1.44
SIT4YDL047W TEP1P53916 434 aa6.06□□□□□ -1.44
SIT4YDL047W NGL3Q03210 505 aa6.06□□□□□ -1.44
SIT4YDL047W ENT5Q03769 411 aaKnown RBP6.06□□□□□ -1.44
SIT4YDL047W ATG16Q03818 150 aa6.06□□□□□ -1.44
SIT4YDL047W YMR018WQ04364 514 aa6.06□□□□□ -1.44
SIT4YDL047W THI7Q05998 598 aa6.06□□□□□ -1.44
SIT4YDL047W OPY2Q06810 360 aa6.06□□□□□ -1.44
SIT4YDL047W PGC1Q08959 321 aa6.06□□□□□ -1.44
SIT4YDL047W NEW1Q08972 1196 aaKnown RBP6.06□□□□□ -1.44
SIT4YDL047W COX5AP00424 153 aa6.05□□□□□ -1.44
SIT4YDL047W DBF4P32325 704 aa6.05□□□□□ -1.44
SIT4YDL047W HXT3P32466 567 aaKnown RBP6.05□□□□□ -1.44
SIT4YDL047W BLI1P35727 113 aa6.05□□□□□ -1.44
SIT4YDL047W IRS4P36115 615 aaKnown RBP6.05□□□□□ -1.44
SIT4YDL047W RTT107P38850 1070 aa6.05□□□□□ -1.44
SIT4YDL047W CCT6P39079 546 aa6.05□□□□□ -1.44
SIT4YDL047W ROK1P45818 564 aaPredicted RBP6.05□□□□□ -1.44
SIT4YDL047W BUD13P46947 266 aaPredicted RBP6.05□□□□□ -1.44
SIT4YDL047W STR3P53101 465 aaKnown RBP6.05□□□□□ -1.44
SIT4YDL047W PCL10P53124 433 aa6.05□□□□□ -1.44
SIT4YDL047W VPS75P53853 264 aa6.05□□□□□ -1.44
SIT4YDL047W YNL143CP53908 130 aa6.05□□□□□ -1.44
SIT4YDL047W TGL2P54857 326 aa6.05□□□□□ -1.44
SIT4YDL047W GRX3Q03835 250 aa6.05□□□□□ -1.44
SIT4YDL047W PUF3Q07807 879 aaKnown RBP RIP-Chip data6.05□□□□□ -1.44not detected
SIT4YDL047W YLL032CQ07834 825 aaKnown RBP RIP-Chip data6.05□□□□□ -1.44not detected
SIT4YDL047W ATG9Q12142 997 aa6.05□□□□□ -1.44
SIT4YDL047W SUL2Q12325 893 aa6.05□□□□□ -1.44
SIT4YDL047W MPH2P0CD99 609 aa6.04□□□□□ -1.44
SIT4YDL047W ABF1P14164 731 aa6.04□□□□□ -1.44
SIT4YDL047W PRP9P19736 530 aaKnown RBP6.04□□□□□ -1.44
SIT4YDL047W PPH21P23594 369 aa6.04□□□□□ -1.44
SIT4YDL047W MRS6P32864 603 aaKnown RBP6.04□□□□□ -1.44
SIT4YDL047W SCD5P34758 872 aa6.04□□□□□ -1.44
SIT4YDL047W PCA1P38360 1216 aa6.04□□□□□ -1.44
SIT4YDL047W SRP72P38688 640 aaKnown RBP6.04□□□□□ -1.44
SIT4YDL047W PPE1P38796 400 aa6.04□□□□□ -1.44
SIT4YDL047W SPC72P39723 622 aa6.04□□□□□ -1.44
SIT4YDL047W RPH1P39956 796 aa6.04□□□□□ -1.44
SIT4YDL047W RPL34BP40525 121 aaKnown RBP6.04□□□□□ -1.44
SIT4YDL047W MKT1P40850 830 aaKnown RBP6.04□□□□□ -1.44
SIT4YDL047W SWC4P53201 476 aa6.04□□□□□ -1.44
SIT4YDL047W NNF2P53253 936 aa6.04□□□□□ -1.44
SIT4YDL047W NOG2P53742 486 aaKnown RBP6.04□□□□□ -1.44
SIT4YDL047W CSL4P53859 292 aaPredicted RBP6.04□□□□□ -1.44
SIT4YDL047W JJJ1P53863 590 aa6.04□□□□□ -1.44
SIT4YDL047W VAC7P53950 1165 aa6.04□□□□□ -1.44
SIT4YDL047W REG1Q00816 1014 aa6.04□□□□□ -1.44
SIT4YDL047W ARG7Q04728 441 aa6.04□□□□□ -1.44
SIT4YDL047W HBT1Q07653 1046 aaKnown RBP6.04□□□□□ -1.44
SIT4YDL047W LDB18Q07887 179 aa6.04□□□□□ -1.44
SIT4YDL047W AAD15Q08361 143 aa6.04□□□□□ -1.44
SIT4YDL047W YDR061WQ12298 539 aa6.04□□□□□ -1.44
SIT4YDL047W TRA1P38811 3744 aa6.03□□□□□ -1.44
SIT4YDL047W TUB1P09733 447 aaKnown RBP6.03□□□□□ -1.44
SIT4YDL047W DAL82P21705 255 aa6.03□□□□□ -1.44
SIT4YDL047W UBA1P22515 1024 aaKnown RBP6.03□□□□□ -1.44
SIT4YDL047W RBK1P25332 333 aa6.03□□□□□ -1.44
SIT4YDL047W TFA2P36145 328 aa6.03□□□□□ -1.44
SIT4YDL047W UBS1P38290 277 aa6.03□□□□□ -1.44
SIT4YDL047W OTU2P38747 307 aaKnown RBP6.03□□□□□ -1.44
SIT4YDL047W STN1P38960 494 aa6.03□□□□□ -1.44
SIT4YDL047W YMR124WP39523 943 aaKnown RBP6.03□□□□□ -1.44
SIT4YDL047W NUP85P46673 744 aa6.03□□□□□ -1.44
SIT4YDL047W CBC2Q08920 208 aaKnown RBP RIP-Chip data6.03□□□□□ -1.44not detected
SIT4YDL047W VPS68Q12016 184 aa6.03□□□□□ -1.44
SIT4YDL047W SKM1Q12469 655 aa6.03□□□□□ -1.44
SIT4YDL047W UTP20P35194 2493 aaKnown RBP6.03□□□□□ -1.44
SIT4YDL047W PET111P08468 800 aa6.02□□□□□ -1.45
SIT4YDL047W TUB3P09734 445 aaKnown RBP6.02□□□□□ -1.45
SIT4YDL047W GLN4P13188 809 aaKnown RBP6.02□□□□□ -1.45
SIT4YDL047W HSC82P15108 705 aaKnown RBP6.02□□□□□ -1.45
SIT4YDL047W GAL11P19659 1081 aa6.02□□□□□ -1.45
SIT4YDL047W SFL1P20134 766 aa6.02□□□□□ -1.45
SIT4YDL047W CWP1P28319 239 aa6.02□□□□□ -1.45
SIT4YDL047W ECM2P38241 364 aaKnown RBP6.02□□□□□ -1.45
SIT4YDL047W RRT2P38332 387 aa6.02□□□□□ -1.45
SIT4YDL047W HIS2P38635 335 aa6.02□□□□□ -1.45
SIT4YDL047W DIA4P38705 446 aaPredicted RBP6.02□□□□□ -1.45
SIT4YDL047W SET5P38890 526 aaKnown RBP6.02□□□□□ -1.45
SIT4YDL047W FLC2P39719 783 aa6.02□□□□□ -1.45
SIT4YDL047W ARG2P40360 574 aa6.02□□□□□ -1.45
SIT4YDL047W CTK3P46963 296 aaPredicted RBP6.02□□□□□ -1.45
SIT4YDL047W COG1P53079 417 aa6.02□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms