RNA–Protein interactions for RNA: YCL001W

RER1, Transcript of Protein involved in retention of membrane proteins, yeastyeast

Gene RER1, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RER1YCL001W PDR18P53756 1333 aa5.12□□□□□ -1.59
RER1YCL001W TOM1Q03280 3268 aa5.11□□□□□ -1.59
RER1YCL001W HEM1P09950 548 aaPredicted RBP5.11□□□□□ -1.59
RER1YCL001W TUP1P16649 713 aa5.11□□□□□ -1.59
RER1YCL001W CRG1P38892 291 aaRIP-Chip data5.11□□□□□ -1.59not detected
RER1YCL001W CKB2P38930 258 aa5.11□□□□□ -1.59
RER1YCL001W FUN12P39730 1002 aaKnown RBP5.11□□□□□ -1.59
RER1YCL001W FTR1P40088 404 aa5.11□□□□□ -1.59
RER1YCL001W TAF4P50105 388 aa5.11□□□□□ -1.59
RER1YCL001W COQ6P53318 479 aa5.11□□□□□ -1.59
RER1YCL001W YNL018CP53976 612 aa5.11□□□□□ -1.59
RER1YCL001W YPL068CQ02749 293 aa5.11□□□□□ -1.59
RER1YCL001W ECM16Q04217 1267 aaKnown RBP5.11□□□□□ -1.59
RER1YCL001W BRE1Q07457 700 aaKnown RBP5.11□□□□□ -1.59
RER1YCL001W GEP3Q08622 556 aa5.11□□□□□ -1.59
RER1YCL001W OPI1P21957 404 aa5.1□□□□□ -1.59
RER1YCL001W SSD1P24276 1250 aaKnown RBP RIP-Chip data5.1□□□□□ -1.59not detected
RER1YCL001W BEM3P32873 1128 aa5.1□□□□□ -1.59
RER1YCL001W IES1P43579 692 aa5.1□□□□□ -1.59
RER1YCL001W IRC8P47046 822 aa5.1□□□□□ -1.59
RER1YCL001W THI73Q07904 523 aa5.1□□□□□ -1.59
RER1YCL001W TSR4P25040 408 aa5.09□□□□□ -1.59
RER1YCL001W ECM32P32644 1121 aaKnown RBP5.09□□□□□ -1.59
RER1YCL001W RPC34P32910 317 aa5.09□□□□□ -1.59
RER1YCL001W OCT1P35999 772 aa5.09□□□□□ -1.59
RER1YCL001W YBL028CP38202 106 aa5.09□□□□□ -1.59
RER1YCL001W CDS1P38221 457 aa5.09□□□□□ -1.59
RER1YCL001W YJR096WP47137 282 aa5.09□□□□□ -1.59
RER1YCL001W PMT3P47190 753 aa5.09□□□□□ -1.59
RER1YCL001W PIB2P53191 635 aa5.09□□□□□ -1.59
RER1YCL001W ATP23P53722 227 aa5.09□□□□□ -1.59
RER1YCL001W SKG3Q06315 1026 aa5.09□□□□□ -1.59
RER1YCL001W YPL216WQ08964 1102 aa5.09□□□□□ -1.59
RER1YCL001W KEL3Q08979 651 aaPredicted RBP5.09□□□□□ -1.59
RER1YCL001W TAH18Q12181 623 aa5.09□□□□□ -1.59
RER1YCL001W WHI2P12611 486 aa5.08□□□□□ -1.6
RER1YCL001W PRE8P23639 250 aa5.08□□□□□ -1.6
RER1YCL001W CST26P38226 397 aa5.08□□□□□ -1.6
RER1YCL001W RFC1P38630 861 aaKnown RBP5.08□□□□□ -1.6
RER1YCL001W RTS1P38903 757 aa5.08□□□□□ -1.6
RER1YCL001W DUN1P39009 513 aa5.08□□□□□ -1.6
RER1YCL001W TIF4631P39935 952 aaKnown RBP5.08□□□□□ -1.6
RER1YCL001W ACA1P39970 489 aa5.08□□□□□ -1.6
RER1YCL001W YMR147WP40218 223 aaKnown RBP5.08□□□□□ -1.6
RER1YCL001W PRM2P40534 656 aa5.08□□□□□ -1.6
RER1YCL001W ENP2P48234 707 aaKnown RBP5.08□□□□□ -1.6
RER1YCL001W BUD17P53727 317 aa5.08□□□□□ -1.6
RER1YCL001W RPS15Q01855 142 aaKnown RBP5.08□□□□□ -1.6
RER1YCL001W RPS21BQ3E754 87 aaKnown RBP5.08□□□□□ -1.6
RER1YCL001W RAD50P12753 1312 aa5.07□□□□□ -1.6
RER1YCL001W YMR084WA2P2R3 262 aa5.07□□□□□ -1.6
RER1YCL001W AQY1P0CD91 305 aa5.07□□□□□ -1.6
RER1YCL001W COQ1P18900 473 aa5.07□□□□□ -1.6
RER1YCL001W HOP1P20050 605 aa5.07□□□□□ -1.6
RER1YCL001W DHR2P36009 735 aaPredicted RBP5.07□□□□□ -1.6
RER1YCL001W ERG7P38604 731 aa5.07□□□□□ -1.6
RER1YCL001W PES4P39684 611 aa5.07□□□□□ -1.6
RER1YCL001W VAB2P40003 282 aa5.07□□□□□ -1.6
RER1YCL001W LYS14P40971 790 aa5.07□□□□□ -1.6
RER1YCL001W NMD5P46970 1048 aa5.07□□□□□ -1.6
RER1YCL001W YGR237CP50089 785 aa5.07□□□□□ -1.6
RER1YCL001W UME1Q03010 460 aa5.07□□□□□ -1.6
RER1YCL001W NKP2Q06162 153 aa5.07□□□□□ -1.6
RER1YCL001W TUS1Q06412 1307 aa5.06□□□□□ -1.6
RER1YCL001W APD1P38281 316 aa5.06□□□□□ -1.6
RER1YCL001W HXT6P39003 570 aaKnown RBP5.06□□□□□ -1.6
RER1YCL001W HXT7P39004 570 aa5.06□□□□□ -1.6
RER1YCL001W YEN1P40028 759 aa5.06□□□□□ -1.6
RER1YCL001W YGR153WP48238 217 aa5.06□□□□□ -1.6
RER1YCL001W CFT2Q12102 859 aaPredicted RBP5.06□□□□□ -1.6
RER1YCL001W TY3A-GQ12173 290 aa5.06□□□□□ -1.6
RER1YCL001W TY3A-IQ99219 290 aa5.06□□□□□ -1.6
RER1YCL001W RAD61Q99359 647 aa5.06□□□□□ -1.6
RER1YCL001W SEC65P29478 273 aa5.05□□□□□ -1.6
RER1YCL001W MRPL9P31334 269 aa5.05□□□□□ -1.6
RER1YCL001W PRP19P32523 503 aaKnown RBP5.05□□□□□ -1.6
RER1YCL001W OAF3P36023 863 aa5.05□□□□□ -1.6
RER1YCL001W STB2P46679 850 aa5.05□□□□□ -1.6
RER1YCL001W RIM20Q12033 661 aa5.05□□□□□ -1.6
RER1YCL001W CDC60P26637 1090 aaKnown RBP5.04□□□□□ -1.6
RER1YCL001W CAP1P28495 268 aaKnown RBP5.04□□□□□ -1.6
RER1YCL001W LOT5P34234 306 aa5.04□□□□□ -1.6
RER1YCL001W SKI2P35207 1287 aaKnown RBP RIP-Chip data5.04□□□□□ -1.6not detected
RER1YCL001W MYO3P36006 1272 aa5.04□□□□□ -1.6
RER1YCL001W YEL025CP39991 1188 aa5.04□□□□□ -1.6
RER1YCL001W VID27P40157 782 aa5.04□□□□□ -1.6
RER1YCL001W BST1P43571 1029 aa5.04□□□□□ -1.6
RER1YCL001W YJL043WP47053 257 aa5.04□□□□□ -1.6
RER1YCL001W SOL4P53315 255 aa5.04□□□□□ -1.6
RER1YCL001W ERG13P54839 491 aaKnown RBP5.04□□□□□ -1.6
RER1YCL001W ECM9Q02202 377 aa5.04□□□□□ -1.6
RER1YCL001W TDA9Q04545 1251 aa5.04□□□□□ -1.6
RER1YCL001W AIM41Q12032 185 aa5.04□□□□□ -1.6
RER1YCL001W TGS1Q12052 315 aa5.04□□□□□ -1.6
RER1YCL001W HFI1Q12060 488 aa5.04□□□□□ -1.6
RER1YCL001W APM4Q99186 491 aa5.04□□□□□ -1.6
RER1YCL001W CHO2P05374 869 aaKnown RBP5.03□□□□□ -1.6
RER1YCL001W GLN4P13188 809 aaKnown RBP5.03□□□□□ -1.6
RER1YCL001W MTC7P32633 139 aa5.03□□□□□ -1.6
RER1YCL001W AAP1P37898 856 aaKnown RBP5.03□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms