RNA–Protein interactions for RNA: YBR288C

APM3, Transcript of Mu3-like subunit of the clathrin associated protein complex (AP-3), yeast

Gene APM3, Length 1,452 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APM3	YBR288C	NUP53	Q03790	475 aa		4.27	□□□□□ -1.73
APM3	YBR288C	ATX2	Q12067	313 aa		4.27	□□□□□ -1.73
APM3	YBR288C	MRC1	P25588	1096 aa		4.26	□□□□□ -1.73
APM3	YBR288C	ESF2	P53743	316 aa	Known RBP	4.26	□□□□□ -1.73
APM3	YBR288C	AIM6	Q07716	390 aa		4.26	□□□□□ -1.73
APM3	YBR288C	PTC6	P25646	442 aa		4.25	□□□□□ -1.73
APM3	YBR288C	ORC5	P50874	479 aa		4.25	□□□□□ -1.73
APM3	YBR288C	ECM22	Q05958	814 aa	Predicted RBP	4.25	□□□□□ -1.73
APM3	YBR288C	SRL1	Q08673	210 aa		4.25	□□□□□ -1.73
APM3	YBR288C	BUD7	Q08754	746 aa		4.25	□□□□□ -1.73
APM3	YBR288C	RRI1	Q12468	440 aa		4.25	□□□□□ -1.73
APM3	YBR288C	CNA1	P23287	553 aa		4.24	□□□□□ -1.73
APM3	YBR288C	TOM71	P38825	639 aa	Known RBP	4.24	□□□□□ -1.73
APM3	YBR288C	YJL107C	P42947	387 aa		4.24	□□□□□ -1.73
APM3	YBR288C	NPA3	P47122	385 aa		4.24	□□□□□ -1.73
APM3	YBR288C	VTC3	Q02725	835 aa		4.24	□□□□□ -1.73
APM3	YBR288C	ICL2	Q12031	575 aa		4.24	□□□□□ -1.73
APM3	YBR288C	PDE1	P22434	369 aa		4.24	□□□□□ -1.73
APM3	YBR288C	BOP3	P53958	396 aa		4.24	□□□□□ -1.73
APM3	YBR288C	CEG1	Q01159	459 aa	Predicted RBP	4.24	□□□□□ -1.73
APM3	YBR288C	LEA1	Q08963	238 aa	Predicted RBP	4.24	□□□□□ -1.73
APM3	YBR288C	UBX3	Q12229	455 aa		4.24	□□□□□ -1.73
APM3	YBR288C	YBR255C-A	Q3E776	120 aa		4.24	□□□□□ -1.73
APM3	YBR288C	GCS1	P35197	352 aa		4.23	□□□□□ -1.73
APM3	YBR288C	YPT11	P48559	417 aa		4.23	□□□□□ -1.73
APM3	YBR288C	YPR003C	P53394	754 aa		4.23	□□□□□ -1.73
APM3	YBR288C	COX1	P00401	534 aa		4.22	□□□□□ -1.73
APM3	YBR288C	SWC3	P31376	625 aa		4.22	□□□□□ -1.73
APM3	YBR288C	MSS51	P32335	436 aa		4.22	□□□□□ -1.73
APM3	YBR288C	ARN1	P38731	627 aa		4.22	□□□□□ -1.73
APM3	YBR288C	YIL152W	P40455	235 aa		4.22	□□□□□ -1.73
APM3	YBR288C	YNL144C	P53907	740 aa		4.22	□□□□□ -1.73
APM3	YBR288C	THI3	Q07471	609 aa		4.22	□□□□□ -1.73
APM3	YBR288C	NEW1	Q08972	1196 aa	Known RBP	4.22	□□□□□ -1.73
APM3	YBR288C	ARP7	Q12406	477 aa		4.22	□□□□□ -1.73
APM3	YBR288C	SSB1	P11484	613 aa	Known RBP	4.21	□□□□□ -1.74
APM3	YBR288C	SSB2	P40150	613 aa	Known RBP	4.21	□□□□□ -1.74
APM3	YBR288C	MAD3	P47074	515 aa		4.21	□□□□□ -1.74
APM3	YBR288C	DSE3	Q08729	430 aa		4.21	□□□□□ -1.74
APM3	YBR288C	LAC1	P28496	418 aa		4.2	□□□□□ -1.74
APM3	YBR288C	YCR043C	P25361	127 aa		4.19	□□□□□ -1.74
APM3	YBR288C	FRD1	P32614	470 aa	Known RBP	4.19	□□□□□ -1.74
APM3	YBR288C	RGT1	P32862	1170 aa		4.19	□□□□□ -1.74
APM3	YBR288C	FUN12	P39730	1002 aa	Known RBP	4.19	□□□□□ -1.74
APM3	YBR288C	MAF1	P41910	395 aa		4.19	□□□□□ -1.74
APM3	YBR288C	YGR079W	P53249	370 aa		4.19	□□□□□ -1.74
APM3	YBR288C	TGL2	P54857	326 aa		4.19	□□□□□ -1.74
APM3	YBR288C	YMR034C	Q05131	434 aa	Predicted RBP	4.19	□□□□□ -1.74
APM3	YBR288C	PDR8	Q06149	701 aa		4.19	□□□□□ -1.74
APM3	YBR288C	ARC40	P38328	384 aa	Known RBP	4.18	□□□□□ -1.74
APM3	YBR288C	STT3	P39007	718 aa	Known RBP	4.18	□□□□□ -1.74
APM3	YBR288C	CDC1	P40986	491 aa		4.18	□□□□□ -1.74
APM3	YBR288C	UBX6	P47049	396 aa		4.18	□□□□□ -1.74
APM3	YBR288C	MLH2	Q07980	695 aa		4.18	□□□□□ -1.74
APM3	YBR288C	GSH2	Q08220	491 aa		4.18	□□□□□ -1.74
APM3	YBR288C	MPD2	Q99316	277 aa		4.18	□□□□□ -1.74
APM3	YBR288C	NIC96	P34077	839 aa		4.18	□□□□□ -1.74
APM3	YBR288C	HES1	P35843	434 aa		4.18	□□□□□ -1.74
APM3	YBR288C	TES1	P41903	349 aa	Known RBP	4.18	□□□□□ -1.74
APM3	YBR288C	YPL108W	Q02872	168 aa	Predicted RBP	4.18	□□□□□ -1.74
APM3	YBR288C	SND1	Q04007	877 aa		4.18	□□□□□ -1.74
APM3	YBR288C	YDR109C	Q04585	715 aa		4.18	□□□□□ -1.74
APM3	YBR288C	YOL114C	Q12322	202 aa		4.18	□□□□□ -1.74
APM3	YBR288C	RPL42A	P0CX27	106 aa	Known RBP	4.17	□□□□□ -1.74
APM3	YBR288C	RPL42B	P0CX28	106 aa	Known RBP	4.17	□□□□□ -1.74
APM3	YBR288C	YAT2	P40017	923 aa		4.17	□□□□□ -1.74
APM3	YBR288C	CAB2	P40506	365 aa		4.17	□□□□□ -1.74
APM3	YBR288C	NDD1	Q08887	554 aa		4.17	□□□□□ -1.74
APM3	YBR288C	RVB2	Q12464	471 aa	Known RBP	4.17	□□□□□ -1.74
APM3	YBR288C	OCT1	P35999	772 aa		4.16	□□□□□ -1.74
APM3	YBR288C	TPA1	P40032	644 aa	Known RBP	4.16	□□□□□ -1.74
APM3	YBR288C	YRB30	P53107	440 aa	Predicted RBP	4.16	□□□□□ -1.74
APM3	YBR288C	YGL036W	P53185	909 aa	Predicted RBP	4.16	□□□□□ -1.74
APM3	YBR288C	SIR1	P21691	654 aa		4.15	□□□□□ -1.75
APM3	YBR288C	URK1	P27515	501 aa		4.15	□□□□□ -1.75
APM3	YBR288C	VPS41	P38959	992 aa		4.15	□□□□□ -1.75
APM3	YBR288C	MET30	P39014	640 aa		4.15	□□□□□ -1.75
APM3	YBR288C	TAM41	P53230	385 aa		4.15	□□□□□ -1.75
APM3	YBR288C	MCH4	Q08268	501 aa		4.15	□□□□□ -1.75
APM3	YBR288C	ADE3	P07245	946 aa	Known RBP	4.14	□□□□□ -1.75
APM3	YBR288C	YFL068W	P0CX99	160 aa		4.14	□□□□□ -1.75
APM3	YBR288C	YLL066W-A	P0CY00	160 aa		4.14	□□□□□ -1.75
APM3	YBR288C	YLL067W-A	P0CY01	160 aa		4.14	□□□□□ -1.75
APM3	YBR288C	POL3	P15436	1097 aa		4.14	□□□□□ -1.75
APM3	YBR288C	RIT1	P23796	513 aa		4.14	□□□□□ -1.75
APM3	YBR288C	YIL169C	P40442	995 aa		4.14	□□□□□ -1.75
APM3	YBR288C	VPS25	P47142	202 aa		4.14	□□□□□ -1.75
APM3	YBR288C	TEP1	P53916	434 aa		4.14	□□□□□ -1.75
APM3	YBR288C	ATG21	Q02887	496 aa		4.14	□□□□□ -1.75
APM3	YBR288C	PIG1	Q06216	648 aa		4.14	□□□□□ -1.75
APM3	YBR288C	SWI4	P25302	1093 aa	Known RBP	4.13	□□□□□ -1.75
APM3	YBR288C	YCR006C	P25350	157 aa		4.13	□□□□□ -1.75
APM3	YBR288C	EAF7	P53911	425 aa	Known RBP	4.13	□□□□□ -1.75
APM3	YBR288C	GTB1	Q04924	702 aa		4.13	□□□□□ -1.75
APM3	YBR288C	FRE3	Q08905	711 aa		4.13	□□□□□ -1.75
APM3	YBR288C	YLR112W	Q12130	139 aa		4.13	□□□□□ -1.75
APM3	YBR288C	SUL2	Q12325	893 aa		4.13	□□□□□ -1.75
APM3	YBR288C	SST2	P11972	698 aa	Known RBP	4.12	□□□□□ -1.75
APM3	YBR288C	MSY1	P48527	492 aa		4.12	□□□□□ -1.75
APM3	YBR288C	MOT3	P54785	490 aa	Known RBP	4.12	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 26.2 ms