RNA–Protein interactions for RNA: YBR160W

CDC28, Transcript of Cyclin-dependent kinase (CDK) catalytic subunit, yeastyeast

Gene CDC28, Length 897 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC28YBR160W CCL1P37366 393 aa5.06□□□□□ -1.6
CDC28YBR160W POP4P38336 279 aa5.06□□□□□ -1.6
CDC28YBR160W CRP1P38845 465 aaKnown RBP5.06□□□□□ -1.6
CDC28YBR160W VPS45P38932 577 aa5.06□□□□□ -1.6
CDC28YBR160W YMR134WP40207 237 aa5.06□□□□□ -1.6
CDC28YBR160W YTA12P40341 825 aa5.06□□□□□ -1.6
CDC28YBR160W RLP7P40693 322 aaKnown RBP5.06□□□□□ -1.6
CDC28YBR160W LCB2P40970 561 aa5.06□□□□□ -1.6
CDC28YBR160W HSV2P50079 448 aaPredicted RBP5.06□□□□□ -1.6
CDC28YBR160W MTC3P53077 123 aa5.06□□□□□ -1.6
CDC28YBR160W LSB1P53281 241 aa5.06□□□□□ -1.6
CDC28YBR160W DON1Q05610 365 aa5.06□□□□□ -1.6
CDC28YBR160W YDR278CQ05612 105 aa5.06□□□□□ -1.6
CDC28YBR160W NOT5Q12514 560 aaPredicted RBP5.06□□□□□ -1.6
CDC28YBR160W SOD2P00447 233 aa5.05□□□□□ -1.6
CDC28YBR160W ILV1P00927 576 aaKnown RBP5.05□□□□□ -1.6
CDC28YBR160W RPL24AP04449 155 aaKnown RBP5.05□□□□□ -1.6
CDC28YBR160W RPS3P05750 240 aaKnown RBP5.05□□□□□ -1.6
CDC28YBR160W CDC33P07260 213 aaKnown RBP5.05□□□□□ -1.6
CDC28YBR160W PRP22P24384 1145 aaKnown RBP5.05□□□□□ -1.6
CDC28YBR160W GPI10P30777 616 aa5.05□□□□□ -1.6
CDC28YBR160W TPS2P31688 896 aaKnown RBP5.05□□□□□ -1.6
CDC28YBR160W YEL1P34225 687 aa5.05□□□□□ -1.6
CDC28YBR160W AIM3P38266 947 aaKnown RBP5.05□□□□□ -1.6
CDC28YBR160W SUL1P38359 859 aa5.05□□□□□ -1.6
CDC28YBR160W ASG1P40467 964 aa5.05□□□□□ -1.6
CDC28YBR160W DIM1P41819 318 aaKnown RBP5.05□□□□□ -1.6
CDC28YBR160W ATG36P46983 293 aa5.05□□□□□ -1.6
CDC28YBR160W SET2P46995 733 aaKnown RBP5.05□□□□□ -1.6
CDC28YBR160W USE1P53146 245 aa5.05□□□□□ -1.6
CDC28YBR160W HOP2P53187 214 aa5.05□□□□□ -1.6
CDC28YBR160W IST1P53843 298 aaPredicted RBP5.05□□□□□ -1.6
CDC28YBR160W COG6P53959 839 aa5.05□□□□□ -1.6
CDC28YBR160W MAP1Q01662 387 aaKnown RBP RIP-Chip data5.05□□□□□ -1.6not detected
CDC28YBR160W OSH6Q02201 448 aa5.05□□□□□ -1.6
CDC28YBR160W RPM2Q02773 1202 aa5.05□□□□□ -1.6
CDC28YBR160W SNX3Q08826 162 aaKnown RBP5.05□□□□□ -1.6
CDC28YBR160W PCL8Q08966 492 aa5.05□□□□□ -1.6
CDC28YBR160W RUP1Q12242 671 aa5.05□□□□□ -1.6
CDC28YBR160W PMD1P32634 1753 aa5.05□□□□□ -1.6
CDC28YBR160W CYC1P00044 109 aaPredicted RBP5.04□□□□□ -1.6
CDC28YBR160W PGK1P00560 416 aaKnown RBP5.04□□□□□ -1.6
CDC28YBR160W YAK1P14680 807 aa5.04□□□□□ -1.6
CDC28YBR160W PWP2P25635 923 aaKnown RBP5.04□□□□□ -1.6
CDC28YBR160W CDC48P25694 835 aaKnown RBP5.04□□□□□ -1.6
CDC28YBR160W MSH2P25847 964 aa5.04□□□□□ -1.6
CDC28YBR160W EFT1P32324 842 aaKnown RBP5.04□□□□□ -1.6
CDC28YBR160W KAR9P32526 644 aa5.04□□□□□ -1.6
CDC28YBR160W SEC6P32844 805 aa5.04□□□□□ -1.6
CDC28YBR160W YKR015CP36111 568 aa5.04□□□□□ -1.6
CDC28YBR160W TSC10P38342 320 aa5.04□□□□□ -1.6
CDC28YBR160W NUP60P39705 539 aa5.04□□□□□ -1.6
CDC28YBR160W PFK26P40433 827 aaKnown RBP5.04□□□□□ -1.6
CDC28YBR160W SAE2P46946 345 aa5.04□□□□□ -1.6
CDC28YBR160W NMA2P53204 395 aa5.04□□□□□ -1.6
CDC28YBR160W KTR5P53966 522 aaPredicted RBP5.04□□□□□ -1.6
CDC28YBR160W TIM8P57744 87 aa5.04□□□□□ -1.6
CDC28YBR160W SLT2Q00772 484 aa5.04□□□□□ -1.6
CDC28YBR160W YDR222WQ04925 415 aa5.04□□□□□ -1.6
CDC28YBR160W NDL1Q06568 189 aa5.04□□□□□ -1.6
CDC28YBR160W VIK1Q12045 647 aa5.04□□□□□ -1.6
CDC28YBR160W YLL058WQ12198 575 aa5.04□□□□□ -1.6
CDC28YBR160W GPM3Q12326 303 aa5.04□□□□□ -1.6
CDC28YBR160W MDM20Q12387 796 aaKnown RBP5.04□□□□□ -1.6
CDC28YBR160W RTP1Q12751 981 aa5.04□□□□□ -1.6
CDC28YBR160W GAL10P04397 699 aa5.03□□□□□ -1.6
CDC28YBR160W SRD1P09007 221 aa5.03□□□□□ -1.6
CDC28YBR160W ILS1P09436 1072 aaKnown RBP5.03□□□□□ -1.6
CDC28YBR160W TUB3P09734 445 aaKnown RBP5.03□□□□□ -1.6
CDC28YBR160W AAR2P32357 355 aaPredicted RBP5.03□□□□□ -1.6
CDC28YBR160W SEC66P33754 206 aa5.03□□□□□ -1.6
CDC28YBR160W NUP120P35729 1037 aa5.03□□□□□ -1.6
CDC28YBR160W HES1P35843 434 aa5.03□□□□□ -1.6
CDC28YBR160W DUG2P38149 878 aa5.03□□□□□ -1.6
CDC28YBR160W UBP13P38187 747 aa5.03□□□□□ -1.6
CDC28YBR160W OAF1P39720 1047 aaPredicted RBP5.03□□□□□ -1.6
CDC28YBR160W YEN1P40028 759 aa5.03□□□□□ -1.6
CDC28YBR160W PDS1P40316 373 aaPredicted RBP5.03□□□□□ -1.6
CDC28YBR160W AIM20P40451 204 aa5.03□□□□□ -1.6
CDC28YBR160W DPH1P40487 425 aaKnown RBP5.03□□□□□ -1.6
CDC28YBR160W RTA1P53047 317 aa5.03□□□□□ -1.6
CDC28YBR160W RTS3P53289 263 aa5.03□□□□□ -1.6
CDC28YBR160W ORC4P54791 529 aa5.03□□□□□ -1.6
CDC28YBR160W MSC2Q03455 724 aa5.03□□□□□ -1.6
CDC28YBR160W PLB2Q03674 706 aa5.03□□□□□ -1.6
CDC28YBR160W ACL4Q03771 387 aa5.03□□□□□ -1.6
CDC28YBR160W RSM24Q03976 319 aa5.03□□□□□ -1.6
CDC28YBR160W UFO1Q04511 668 aa5.03□□□□□ -1.6
CDC28YBR160W ACK1Q07622 623 aaPredicted RBP5.03□□□□□ -1.6
CDC28YBR160W RIX7Q07844 837 aaKnown RBP5.03□□□□□ -1.6
CDC28YBR160W NTG2Q08214 380 aa5.03□□□□□ -1.6
CDC28YBR160W MSH5Q12175 901 aa5.03□□□□□ -1.6
CDC28YBR160W IES3Q12345 250 aa5.03□□□□□ -1.6
CDC28YBR160W SPE4Q12455 300 aa5.03□□□□□ -1.6
CDC28YBR160W RRD2Q12461 358 aa5.03□□□□□ -1.6
CDC28YBR160W RPS13P05756 151 aaKnown RBP5.02□□□□□ -1.61
CDC28YBR160W CMD1P06787 147 aaKnown RBP5.02□□□□□ -1.61
CDC28YBR160W AEP2P22136 580 aa5.02□□□□□ -1.61
CDC28YBR160W RRT12P25381 491 aa5.02□□□□□ -1.61
CDC28YBR160W RPC19P28000 142 aaKnown RBP5.02□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms