RNA–Protein interactions for RNA: YBL058W

SHP1, Transcript of UBX (ubiquitin regulatory X) domain-containing protein, yeastyeast

Gene SHP1, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHP1YBL058W RTT10Q08924 1013 aa5.99□□□□□ -1.45
SHP1YBL058W THI21Q08975 551 aa5.99□□□□□ -1.45
SHP1YBL058W SFI1Q12369 946 aa5.99□□□□□ -1.45
SHP1YBL058W PRP8P33334 2413 aaKnown RBP5.99□□□□□ -1.45
SHP1YBL058W RIP1P08067 215 aa5.98□□□□□ -1.45
SHP1YBL058W SBP1P10080 294 aaKnown RBP5.98□□□□□ -1.45
SHP1YBL058W MTF2P10849 440 aa5.98□□□□□ -1.45
SHP1YBL058W HAP4P14064 554 aa5.98□□□□□ -1.45
SHP1YBL058W MNE1P24720 663 aa5.98□□□□□ -1.45
SHP1YBL058W MSH3P25336 1018 aa5.98□□□□□ -1.45
SHP1YBL058W PHO87P25360 923 aa5.98□□□□□ -1.45
SHP1YBL058W HXT3P32466 567 aaKnown RBP5.98□□□□□ -1.45
SHP1YBL058W AIM26P32858 118 aa5.98□□□□□ -1.45
SHP1YBL058W RRP3P38712 501 aaKnown RBP5.98□□□□□ -1.45
SHP1YBL058W YGR111WP53265 400 aa5.98□□□□□ -1.45
SHP1YBL058W CSL4P53859 292 aaPredicted RBP5.98□□□□□ -1.45
SHP1YBL058W IPI3P53877 555 aa5.98□□□□□ -1.45
SHP1YBL058W VAC7P53950 1165 aa5.98□□□□□ -1.45
SHP1YBL058W SSL2Q00578 843 aa5.98□□□□□ -1.45
SHP1YBL058W YDR131CQ03899 556 aa5.98□□□□□ -1.45
SHP1YBL058W YDR444WQ04093 687 aa5.98□□□□□ -1.45
SHP1YBL058W AFI1Q99222 893 aa5.98□□□□□ -1.45
SHP1YBL058W ATE1P16639 503 aa5.97□□□□□ -1.45
SHP1YBL058W SPC110P32380 944 aa5.97□□□□□ -1.45
SHP1YBL058W YKL050CP35736 922 aa5.97□□□□□ -1.45
SHP1YBL058W ALY1P36117 915 aa5.97□□□□□ -1.45
SHP1YBL058W JNM1P36224 373 aa5.97□□□□□ -1.45
SHP1YBL058W NCL1P38205 684 aaKnown RBP5.97□□□□□ -1.45
SHP1YBL058W UBS1P38290 277 aa5.97□□□□□ -1.45
SHP1YBL058W SWC5P38326 303 aa5.97□□□□□ -1.45
SHP1YBL058W PPE1P38796 400 aa5.97□□□□□ -1.45
SHP1YBL058W ERP2P39704 215 aa5.97□□□□□ -1.45
SHP1YBL058W YEL028WP39989 153 aa5.97□□□□□ -1.45
SHP1YBL058W VFA1P40080 203 aa5.97□□□□□ -1.45
SHP1YBL058W RAD26P40352 1085 aa5.97□□□□□ -1.45
SHP1YBL058W DJP1P40564 432 aa5.97□□□□□ -1.45
SHP1YBL058W RRT5P43607 289 aa5.97□□□□□ -1.45
SHP1YBL058W DLD2P46681 530 aaKnown RBP5.97□□□□□ -1.45
SHP1YBL058W YJR124CP47159 448 aa5.97□□□□□ -1.45
SHP1YBL058W CDC55Q00362 526 aa5.97□□□□□ -1.45
SHP1YBL058W UME1Q03010 460 aa5.97□□□□□ -1.45
SHP1YBL058W YMR178WQ03219 274 aaKnown RBP5.97□□□□□ -1.45
SHP1YBL058W UTP13Q05946 817 aaKnown RBP5.97□□□□□ -1.45
SHP1YBL058W KAP95Q06142 861 aaKnown RBP5.97□□□□□ -1.45
SHP1YBL058W TRE2Q08693 809 aa5.97□□□□□ -1.45
SHP1YBL058W GCN1P33892 2672 aaKnown RBP5.97□□□□□ -1.45
SHP1YBL058W INH1P01097 85 aa5.96□□□□□ -1.46
SHP1YBL058W MPH2P0CD99 609 aa5.96□□□□□ -1.46
SHP1YBL058W CLC1P17891 233 aa5.96□□□□□ -1.46
SHP1YBL058W TRX1P22217 103 aaKnown RBP5.96□□□□□ -1.46
SHP1YBL058W VPS24P36095 224 aaKnown RBP5.96□□□□□ -1.46
SHP1YBL058W YHL041WP38730 149 aa5.96□□□□□ -1.46
SHP1YBL058W RPS10BP46784 105 aaKnown RBP5.96□□□□□ -1.46
SHP1YBL058W YJL132WP47014 750 aa5.96□□□□□ -1.46
SHP1YBL058W NRD1P53617 575 aaKnown RBP RIP-Chip data5.96□□□□□ -1.46not detected
SHP1YBL058W PPN1Q04119 674 aa5.96□□□□□ -1.46
SHP1YBL058W YPR114WQ06107 315 aa5.96□□□□□ -1.46
SHP1YBL058W SWC7Q06707 132 aa5.96□□□□□ -1.46
SHP1YBL058W RPS10AQ08745 105 aaPredicted RBP5.96□□□□□ -1.46
SHP1YBL058W CBC2Q08920 208 aaKnown RBP RIP-Chip data5.96□□□□□ -1.46not detected
SHP1YBL058W YDR061WQ12298 539 aa5.96□□□□□ -1.46
SHP1YBL058W SUL2Q12325 893 aa5.96□□□□□ -1.46
SHP1YBL058W GPM3Q12326 303 aa5.96□□□□□ -1.46
SHP1YBL058W YKR104WP0CE69 306 aa5.95□□□□□ -1.46
SHP1YBL058W GFA1P14742 717 aaKnown RBP5.95□□□□□ -1.46
SHP1YBL058W PRP9P19736 530 aaKnown RBP5.95□□□□□ -1.46
SHP1YBL058W AAT2P23542 418 aaKnown RBP5.95□□□□□ -1.46
SHP1YBL058W SNT1P25357 1226 aa5.95□□□□□ -1.46
SHP1YBL058W ELO1P39540 310 aa5.95□□□□□ -1.46
SHP1YBL058W KHA1P40309 873 aa5.95□□□□□ -1.46
SHP1YBL058W SET2P46995 733 aaKnown RBP5.95□□□□□ -1.46
SHP1YBL058W TCB2P48231 1178 aa5.95□□□□□ -1.46
SHP1YBL058W ACS2P52910 683 aaKnown RBP5.95□□□□□ -1.46
SHP1YBL058W YGR266WP53326 701 aa5.95□□□□□ -1.46
SHP1YBL058W YNL247WP53852 767 aaKnown RBP5.95□□□□□ -1.46
SHP1YBL058W YNL040WP53960 456 aaPredicted RBP5.95□□□□□ -1.46
SHP1YBL058W REG1Q00816 1014 aa5.95□□□□□ -1.46
SHP1YBL058W UFO1Q04511 668 aa5.95□□□□□ -1.46
SHP1YBL058W YLR287CQ05881 355 aa5.95□□□□□ -1.46
SHP1YBL058W YOR389WQ08912 624 aa5.95□□□□□ -1.46
SHP1YBL058W YPL278CQ08990 100 aa5.95□□□□□ -1.46
SHP1YBL058W OCA6Q12454 224 aa5.95□□□□□ -1.46
SHP1YBL058W TSC13Q99190 310 aa5.95□□□□□ -1.46
SHP1YBL058W YOR338WQ99326 363 aa5.95□□□□□ -1.46
SHP1YBL058W IZH4Q99393 312 aa5.95□□□□□ -1.46
SHP1YBL058W ABF1P14164 731 aa5.94□□□□□ -1.46
SHP1YBL058W PMA2P19657 947 aa5.94□□□□□ -1.46
SHP1YBL058W DAL82P21705 255 aa5.94□□□□□ -1.46
SHP1YBL058W RPN12P32496 274 aa5.94□□□□□ -1.46
SHP1YBL058W IRS4P36115 615 aaKnown RBP5.94□□□□□ -1.46
SHP1YBL058W BIT2P38346 545 aa5.94□□□□□ -1.46
SHP1YBL058W RTT107P38850 1070 aa5.94□□□□□ -1.46
SHP1YBL058W CCT6P39079 546 aa5.94□□□□□ -1.46
SHP1YBL058W ATM1P40416 690 aa5.94□□□□□ -1.46
SHP1YBL058W MNN11P46985 422 aaKnown RBP5.94□□□□□ -1.46
SHP1YBL058W YGR127WP53275 312 aa5.94□□□□□ -1.46
SHP1YBL058W TIM13P53299 105 aa5.94□□□□□ -1.46
SHP1YBL058W TGL2P54857 326 aa5.94□□□□□ -1.46
SHP1YBL058W MSH6Q03834 1242 aa5.94□□□□□ -1.46
SHP1YBL058W PUN1Q06991 263 aa5.94□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 60.5 ms