RNA–Protein interactions for RNA: YBL017C

PEP1, Transcript of Type I transmembrane sorting receptor for multiple vacuolar hydrolases, yeastyeast

Gene PEP1, Length 4,740 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP1YBL017C MIH1P23748 554 aa1.89□□□□□ -2.11
PEP1YBL017C MNE1P24720 663 aa1.89□□□□□ -2.11
PEP1YBL017C PDC6P26263 563 aaKnown RBP1.89□□□□□ -2.11
PEP1YBL017C RAM2P29703 316 aa1.89□□□□□ -2.11
PEP1YBL017C MET22P32179 357 aa1.89□□□□□ -2.11
PEP1YBL017C NPL6P32832 435 aa1.89□□□□□ -2.11
PEP1YBL017C SGE1P33335 543 aa1.89□□□□□ -2.11
PEP1YBL017C THI80P35202 319 aa1.89□□□□□ -2.11
PEP1YBL017C SOL2P37262 315 aa1.89□□□□□ -2.11
PEP1YBL017C ALG3P38179 458 aa1.89□□□□□ -2.11
PEP1YBL017C PPE1P38796 400 aa1.89□□□□□ -2.11
PEP1YBL017C RPS14BP39516 138 aaKnown RBP1.89□□□□□ -2.11
PEP1YBL017C UBP7P40453 1071 aa1.89□□□□□ -2.11
PEP1YBL017C RRT5P43607 289 aa1.89□□□□□ -2.11
PEP1YBL017C ACF4P47129 309 aa1.89□□□□□ -2.11
PEP1YBL017C PYK2P52489 506 aaKnown RBP1.89□□□□□ -2.11
PEP1YBL017C VEL1P53058 206 aa1.89□□□□□ -2.11
PEP1YBL017C HOS2P53096 452 aaPredicted RBP1.89□□□□□ -2.11
PEP1YBL017C PEX8P53248 589 aa1.89□□□□□ -2.11
PEP1YBL017C TFB3Q03290 321 aa1.89□□□□□ -2.11
PEP1YBL017C LCD1Q04377 747 aa1.89□□□□□ -2.11
PEP1YBL017C MFB1Q04922 465 aa1.89□□□□□ -2.11
PEP1YBL017C PLB3Q08108 686 aa1.89□□□□□ -2.11
PEP1YBL017C VHS3Q08438 674 aa1.89□□□□□ -2.11
PEP1YBL017C YOR012WQ12351 137 aa1.89□□□□□ -2.11
PEP1YBL017C YIL046W-AQ3E7Z4 54 aa1.89□□□□□ -2.11
PEP1YBL017C APN1P22936 367 aa1.89□□□□□ -2.11
PEP1YBL017C VPS3P23643 1011 aa1.89□□□□□ -2.11
PEP1YBL017C RNQ1P25367 405 aa1.89□□□□□ -2.11
PEP1YBL017C CCR4P31384 837 aaKnown RBP1.89□□□□□ -2.11
PEP1YBL017C HEM12P32347 362 aaPredicted RBP1.89□□□□□ -2.11
PEP1YBL017C SRB2P34162 210 aa1.89□□□□□ -2.11
PEP1YBL017C MRPL36P36531 177 aa1.89□□□□□ -2.11
PEP1YBL017C HXT5P38695 592 aa1.89□□□□□ -2.11
PEP1YBL017C FAA3P39002 694 aa1.89□□□□□ -2.11
PEP1YBL017C TMN3P40071 706 aa1.89□□□□□ -2.11
PEP1YBL017C YJR039WP47107 1121 aa1.89□□□□□ -2.11
PEP1YBL017C MON1P53129 644 aa1.89□□□□□ -2.11
PEP1YBL017C YML119WQ03208 357 aa1.89□□□□□ -2.11
PEP1YBL017C SMD2Q06217 110 aaKnown RBP1.89□□□□□ -2.11
PEP1YBL017C CUE5Q08412 411 aaKnown RBP1.89□□□□□ -2.11
PEP1YBL017C GCY1P14065 312 aaKnown RBP RIP-Chip data1.89□□□□□ -2.11not detected
PEP1YBL017C KRR1P25586 316 aaPredicted RBP1.89□□□□□ -2.11
PEP1YBL017C FUN30P31380 1131 aa1.89□□□□□ -2.11
PEP1YBL017C SWH1P35845 1188 aa1.89□□□□□ -2.11
PEP1YBL017C DOA1P36037 715 aa1.89□□□□□ -2.11
PEP1YBL017C SSZ1P38788 538 aaKnown RBP1.89□□□□□ -2.11
PEP1YBL017C SSP120P39931 234 aaKnown RBP1.89□□□□□ -2.11
PEP1YBL017C AVT2P39981 480 aa1.89□□□□□ -2.11
PEP1YBL017C RAD26P40352 1085 aa1.89□□□□□ -2.11
PEP1YBL017C CHS6P40955 746 aa1.89□□□□□ -2.11
PEP1YBL017C LOC1P43586 204 aaPredicted RBP1.89□□□□□ -2.11
PEP1YBL017C ASG7P46993 209 aa1.89□□□□□ -2.11
PEP1YBL017C SCY1P53009 804 aa1.89□□□□□ -2.11
PEP1YBL017C DMA2P53924 522 aa1.89□□□□□ -2.11
PEP1YBL017C INA17Q02888 182 aa1.89□□□□□ -2.11
PEP1YBL017C SHS1Q07657 551 aa1.89□□□□□ -2.11
PEP1YBL017C NRT1Q08485 598 aa1.89□□□□□ -2.11
PEP1YBL017C TUF1P02992 437 aaKnown RBP1.88□□□□□ -2.11
PEP1YBL017C PEX34P25584 144 aa1.88□□□□□ -2.11
PEP1YBL017C STP22P25604 385 aa1.88□□□□□ -2.11
PEP1YBL017C AEP1P32493 518 aa1.88□□□□□ -2.11
PEP1YBL017C OCA5P38738 679 aa1.88□□□□□ -2.11
PEP1YBL017C MPT5P39016 859 aaKnown RBP RIP-Chip data1.88□□□□□ -2.11 RIP-Chip
PEP1YBL017C YAT2P40017 923 aa1.88□□□□□ -2.11
PEP1YBL017C CDC1P40986 491 aa1.88□□□□□ -2.11
PEP1YBL017C YJL107CP42947 387 aa1.88□□□□□ -2.11
PEP1YBL017C YNR063WP53749 607 aa1.88□□□□□ -2.11
PEP1YBL017C YMR206WQ03695 313 aa1.88□□□□□ -2.11
PEP1YBL017C SML1Q04964 104 aa1.88□□□□□ -2.11
PEP1YBL017C EIS1Q05050 843 aaKnown RBP1.88□□□□□ -2.11
PEP1YBL017C ECI1Q05871 280 aa1.88□□□□□ -2.11
PEP1YBL017C YLR257WQ06146 321 aaKnown RBP1.88□□□□□ -2.11
PEP1YBL017C YOR389WQ08912 624 aa1.88□□□□□ -2.11
PEP1YBL017C YPL278CQ08990 100 aa1.88□□□□□ -2.11
PEP1YBL017C NCR1Q12200 1170 aa1.88□□□□□ -2.11
PEP1YBL017C SCM3Q12334 223 aa1.88□□□□□ -2.11
PEP1YBL017C TMA7Q3E764 64 aaKnown RBP1.88□□□□□ -2.11
PEP1YBL017C KAR3P17119 729 aa1.88□□□□□ -2.11
PEP1YBL017C PAT1P25644 796 aaKnown RBP1.88□□□□□ -2.11
PEP1YBL017C YPT52P36018 234 aaKnown RBP1.88□□□□□ -2.11
PEP1YBL017C DAN4P47179 1161 aa1.88□□□□□ -2.11
PEP1YBL017C SAM37P50110 327 aa1.88□□□□□ -2.11
PEP1YBL017C ENT5Q03769 411 aaKnown RBP1.88□□□□□ -2.11
PEP1YBL017C RSC2Q06488 889 aa1.88□□□□□ -2.11
PEP1YBL017C VPS68Q12016 184 aa1.88□□□□□ -2.11
PEP1YBL017C YLR125WQ12138 136 aa1.88□□□□□ -2.11
PEP1YBL017C YLR046CQ12253 270 aa1.88□□□□□ -2.11
PEP1YBL017C YPR096CO13587 100 aa1.88□□□□□ -2.11
PEP1YBL017C SEC63P14906 663 aa1.88□□□□□ -2.11
PEP1YBL017C REC107P21651 314 aa1.88□□□□□ -2.11
PEP1YBL017C GEX1P25596 615 aa1.88□□□□□ -2.11
PEP1YBL017C PHO91P27514 894 aa1.88□□□□□ -2.11
PEP1YBL017C OXP1P28273 1286 aa1.88□□□□□ -2.11
PEP1YBL017C BRF1P29056 596 aa1.88□□□□□ -2.11
PEP1YBL017C RPC82P32349 654 aa1.88□□□□□ -2.11
PEP1YBL017C MKK2P32491 506 aa1.88□□□□□ -2.11
PEP1YBL017C ZUO1P32527 433 aaKnown RBP1.88□□□□□ -2.11
PEP1YBL017C GEX2P36173 615 aa1.88□□□□□ -2.11
PEP1YBL017C TIM17P39515 158 aa1.88□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms