RNA–Protein interactions for RNA: YBL006C

LDB7, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene LDB7, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB7YBL006C FLC2P39719 783 aa6.99□□□□□ -1.29
LDB7YBL006C SAW1P39735 261 aa6.99□□□□□ -1.29
LDB7YBL006C RPL34BP40525 121 aaKnown RBP6.99□□□□□ -1.29
LDB7YBL006C IST3P40565 148 aaPredicted RBP6.99□□□□□ -1.29
LDB7YBL006C JJJ1P53863 590 aa6.99□□□□□ -1.29
LDB7YBL006C NAM8Q00539 523 aaKnown RBP6.99□□□□□ -1.29
LDB7YBL006C DIG1Q03063 452 aaKnown RBP6.99□□□□□ -1.29
LDB7YBL006C YMR178WQ03219 274 aaKnown RBP6.99□□□□□ -1.29
LDB7YBL006C ENT5Q03769 411 aaKnown RBP6.99□□□□□ -1.29
LDB7YBL006C TRA1P38811 3744 aa6.99□□□□□ -1.29
LDB7YBL006C POL30P15873 258 aaKnown RBP6.98□□□□□ -1.29
LDB7YBL006C RDS2P19541 446 aaKnown RBP6.98□□□□□ -1.29
LDB7YBL006C YBL055CP34220 418 aaPredicted RBP6.98□□□□□ -1.29
LDB7YBL006C SCD5P34758 872 aa6.98□□□□□ -1.29
LDB7YBL006C IRS4P36115 615 aaKnown RBP6.98□□□□□ -1.29
LDB7YBL006C ELO3P40319 345 aa6.98□□□□□ -1.29
LDB7YBL006C ARG2P40360 574 aa6.98□□□□□ -1.29
LDB7YBL006C YIL108WP40483 696 aaKnown RBP6.98□□□□□ -1.29
LDB7YBL006C STR3P53101 465 aaKnown RBP6.98□□□□□ -1.29
LDB7YBL006C SPC105P53148 917 aa6.98□□□□□ -1.29
LDB7YBL006C TIM13P53299 105 aa6.98□□□□□ -1.29
LDB7YBL006C GND2P53319 492 aa6.98□□□□□ -1.29
LDB7YBL006C MSH6Q03834 1242 aa6.98□□□□□ -1.29
LDB7YBL006C YDR131CQ03899 556 aa6.98□□□□□ -1.29
LDB7YBL006C PPN1Q04119 674 aa6.98□□□□□ -1.29
LDB7YBL006C SOV1Q04748 898 aa6.98□□□□□ -1.29
LDB7YBL006C YPR148CQ06523 435 aa6.98□□□□□ -1.29
LDB7YBL006C ATG10Q07879 167 aa6.98□□□□□ -1.29
LDB7YBL006C YLR001CQ07895 862 aa6.98□□□□□ -1.29
LDB7YBL006C RPN8Q08723 338 aaKnown RBP6.98□□□□□ -1.29
LDB7YBL006C CBC2Q08920 208 aaKnown RBP RIP-Chip data6.98□□□□□ -1.29not detected
LDB7YBL006C RTT10Q08924 1013 aa6.98□□□□□ -1.29
LDB7YBL006C TUB3P09734 445 aaKnown RBP6.97□□□□□ -1.29
LDB7YBL006C RPL1AP0CX43 217 aaKnown RBP6.97□□□□□ -1.29
LDB7YBL006C RPL1BP0CX44 217 aaKnown RBP6.97□□□□□ -1.29
LDB7YBL006C SFL1P20134 766 aa6.97□□□□□ -1.29
LDB7YBL006C SLY1P22213 666 aa6.97□□□□□ -1.29
LDB7YBL006C RBK1P25332 333 aa6.97□□□□□ -1.29
LDB7YBL006C RRP43P25359 394 aaPredicted RBP6.97□□□□□ -1.29
LDB7YBL006C SLD2P34252 453 aa6.97□□□□□ -1.29
LDB7YBL006C RCK2P38623 610 aa6.97□□□□□ -1.29
LDB7YBL006C LEU5P38702 357 aa6.97□□□□□ -1.29
LDB7YBL006C MND2P40577 368 aa6.97□□□□□ -1.29
LDB7YBL006C ROK1P45818 564 aaPredicted RBP6.97□□□□□ -1.29
LDB7YBL006C BUD13P46947 266 aaPredicted RBP6.97□□□□□ -1.29
LDB7YBL006C KAP114P53067 1004 aa6.97□□□□□ -1.29
LDB7YBL006C TEP1P53916 434 aa6.97□□□□□ -1.29
LDB7YBL006C ALR1Q08269 859 aa6.97□□□□□ -1.29
LDB7YBL006C RKM5Q12367 367 aa6.97□□□□□ -1.29
LDB7YBL006C YOR338WQ99326 363 aa6.97□□□□□ -1.29
LDB7YBL006C SBP1P10080 294 aaKnown RBP6.96□□□□□ -1.3
LDB7YBL006C SPT15P13393 240 aaKnown RBP6.96□□□□□ -1.3
LDB7YBL006C PMS1P14242 873 aa6.96□□□□□ -1.3
LDB7YBL006C TRM1P15565 570 aaKnown RBP6.96□□□□□ -1.3
LDB7YBL006C GAL11P19659 1081 aa6.96□□□□□ -1.3
LDB7YBL006C RAD5P32849 1169 aaPredicted RBP6.96□□□□□ -1.3
LDB7YBL006C RRP3P38712 501 aaKnown RBP6.96□□□□□ -1.3
LDB7YBL006C UME6P39001 836 aa6.96□□□□□ -1.3
LDB7YBL006C SIP4P46954 829 aa6.96□□□□□ -1.3
LDB7YBL006C CIS3P47001 227 aa6.96□□□□□ -1.3
LDB7YBL006C ALY2P47029 1046 aa6.96□□□□□ -1.3
LDB7YBL006C BTN2P53286 410 aa6.96□□□□□ -1.3
LDB7YBL006C NRM1P53718 249 aa6.96□□□□□ -1.3
LDB7YBL006C EAF7P53911 425 aaKnown RBP6.96□□□□□ -1.3
LDB7YBL006C REG1Q00816 1014 aa6.96□□□□□ -1.3
LDB7YBL006C YML096WQ04489 525 aa6.96□□□□□ -1.3
LDB7YBL006C AAD15Q08361 143 aa6.96□□□□□ -1.3
LDB7YBL006C YLL056CQ12177 298 aa6.96□□□□□ -1.3
LDB7YBL006C YDR018CQ12185 396 aa6.96□□□□□ -1.3
LDB7YBL006C YLR462WO13556 202 aa6.95□□□□□ -1.3
LDB7YBL006C ACO1P19414 778 aaKnown RBP RIP-Chip data6.95□□□□□ -1.3not detected
LDB7YBL006C UBP14P38237 781 aaKnown RBP6.95□□□□□ -1.3
LDB7YBL006C YHL049CP38722 271 aa6.95□□□□□ -1.3
LDB7YBL006C TCD1P38756 429 aa6.95□□□□□ -1.3
LDB7YBL006C LRP1P38801 184 aaKnown RBP6.95□□□□□ -1.3
LDB7YBL006C YAT2P40017 923 aa6.95□□□□□ -1.3
LDB7YBL006C LCP5P40079 357 aaPredicted RBP6.95□□□□□ -1.3
LDB7YBL006C EFM4P40516 257 aa6.95□□□□□ -1.3
LDB7YBL006C MKT1P40850 830 aaKnown RBP6.95□□□□□ -1.3
LDB7YBL006C YFL064CP43540 174 aa6.95□□□□□ -1.3
LDB7YBL006C COG1P53079 417 aa6.95□□□□□ -1.3
LDB7YBL006C PCL10P53124 433 aa6.95□□□□□ -1.3
LDB7YBL006C NMA111P53920 997 aa6.95□□□□□ -1.3
LDB7YBL006C ARP9Q05123 467 aa6.95□□□□□ -1.3
LDB7YBL006C VPS38Q05919 439 aa6.95□□□□□ -1.3
LDB7YBL006C LDB18Q07887 179 aa6.95□□□□□ -1.3
LDB7YBL006C THI73Q07904 523 aa6.95□□□□□ -1.3
LDB7YBL006C NRT1Q08485 598 aa6.95□□□□□ -1.3
LDB7YBL006C YBL111CQ3E7Y5 667 aa6.95□□□□□ -1.3
LDB7YBL006C INH1P01097 85 aa6.94□□□□□ -1.3
LDB7YBL006C CLN1P20437 546 aa6.94□□□□□ -1.3
LDB7YBL006C AEP1P32493 518 aa6.94□□□□□ -1.3
LDB7YBL006C PHO11P35842 467 aa6.94□□□□□ -1.3
LDB7YBL006C PHO12P38693 467 aa6.94□□□□□ -1.3
LDB7YBL006C DIA4P38705 446 aaPredicted RBP6.94□□□□□ -1.3
LDB7YBL006C TIM17P39515 158 aa6.94□□□□□ -1.3
LDB7YBL006C YER158CP40095 573 aa6.94□□□□□ -1.3
LDB7YBL006C FET5P43561 622 aa6.94□□□□□ -1.3
LDB7YBL006C CSN12P47130 423 aa6.94□□□□□ -1.3
LDB7YBL006C YML6P51998 286 aa6.94□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 46.8 ms