RNA–Protein interactions for RNA: YAL002W

VPS8, Transcript of Membrane-binding component of the CORVET complex, yeastyeast

Gene VPS8, Length 3,825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS8YAL002W RAD30Q04049 632 aa2.2□□□□□ -2.06
VPS8YAL002W TMA10Q06177 86 aa2.2□□□□□ -2.06
VPS8YAL002W TRM8Q12009 286 aa2.2□□□□□ -2.06
VPS8YAL002W UBC1P21734 215 aaKnown RBP2.19□□□□□ -2.06
VPS8YAL002W YAP3P38749 330 aa2.19□□□□□ -2.06
VPS8YAL002W RTS1P38903 757 aa2.19□□□□□ -2.06
VPS8YAL002W IRC5P43610 853 aa2.19□□□□□ -2.06
VPS8YAL002W RRT6P53117 311 aaPredicted RBP2.19□□□□□ -2.06
VPS8YAL002W YMR155WQ03795 547 aa2.19□□□□□ -2.06
VPS8YAL002W PET122P10355 254 aa2.19□□□□□ -2.06
VPS8YAL002W REC107P21651 314 aa2.19□□□□□ -2.06
VPS8YAL002W CBF2P32504 956 aa2.19□□□□□ -2.06
VPS8YAL002W CTF8P38877 133 aa2.19□□□□□ -2.06
VPS8YAL002W POP2P39008 433 aa2.19□□□□□ -2.06
VPS8YAL002W YER010CP40011 234 aa2.19□□□□□ -2.06
VPS8YAL002W MAM1P40065 302 aa2.19□□□□□ -2.06
VPS8YAL002W SAE2P46946 345 aa2.19□□□□□ -2.06
VPS8YAL002W DSD1P53095 428 aa2.19□□□□□ -2.06
VPS8YAL002W YMR206WQ03695 313 aa2.19□□□□□ -2.06
VPS8YAL002W SIZ1Q04195 904 aa2.19□□□□□ -2.06
VPS8YAL002W UTP21Q06078 939 aaPredicted RBP2.19□□□□□ -2.06
VPS8YAL002W BNR1P40450 1375 aa2.19□□□□□ -2.06
VPS8YAL002W SUI3P09064 285 aaKnown RBP2.19□□□□□ -2.06
VPS8YAL002W PMS1P14242 873 aa2.19□□□□□ -2.06
VPS8YAL002W IST3P40565 148 aaPredicted RBP2.19□□□□□ -2.06
VPS8YAL002W YJL055WP47044 245 aa2.19□□□□□ -2.06
VPS8YAL002W DUO1P53168 247 aaKnown RBP2.19□□□□□ -2.06
VPS8YAL002W YGR250CP53316 781 aaKnown RBP2.19□□□□□ -2.06
VPS8YAL002W SNO2P53823 222 aa2.19□□□□□ -2.06
VPS8YAL002W TRS23Q03784 219 aa2.19□□□□□ -2.06
VPS8YAL002W RGA2Q06407 1009 aa2.19□□□□□ -2.06
VPS8YAL002W POM34Q12445 299 aa2.19□□□□□ -2.06
VPS8YAL002W TRP3P00937 484 aa2.18□□□□□ -2.06
VPS8YAL002W PRE2P30656 287 aaKnown RBP2.18□□□□□ -2.06
VPS8YAL002W EFT1P32324 842 aaKnown RBP2.18□□□□□ -2.06
VPS8YAL002W ERG3P32353 365 aa2.18□□□□□ -2.06
VPS8YAL002W PUP2P32379 260 aa2.18□□□□□ -2.06
VPS8YAL002W RPN2P32565 945 aaKnown RBP2.18□□□□□ -2.06
VPS8YAL002W UBP11P36026 717 aa2.18□□□□□ -2.06
VPS8YAL002W JHD1P40034 492 aa2.18□□□□□ -2.06
VPS8YAL002W PIG2P40187 538 aa2.18□□□□□ -2.06
VPS8YAL002W YPL071CQ02864 156 aa2.18□□□□□ -2.06
VPS8YAL002W YDR131CQ03899 556 aa2.18□□□□□ -2.06
VPS8YAL002W TMA16Q08687 178 aa2.18□□□□□ -2.06
VPS8YAL002W YRF1-4O13559 1382 aa2.18□□□□□ -2.06
VPS8YAL002W RNA1P11745 407 aaKnown RBP2.18□□□□□ -2.06
VPS8YAL002W CKA1P15790 372 aa2.18□□□□□ -2.06
VPS8YAL002W OLE1P21147 510 aaKnown RBP2.18□□□□□ -2.06
VPS8YAL002W ELF1P36053 145 aa2.18□□□□□ -2.06
VPS8YAL002W MCX1P38323 520 aaPredicted RBP2.18□□□□□ -2.06
VPS8YAL002W PLB1P39105 664 aa2.18□□□□□ -2.06
VPS8YAL002W FUN12P39730 1002 aaKnown RBP2.18□□□□□ -2.06
VPS8YAL002W RFX1P48743 811 aa2.18□□□□□ -2.06
VPS8YAL002W TCO89Q08921 799 aa2.18□□□□□ -2.06
VPS8YAL002W APL5Q08951 932 aaKnown RBP2.18□□□□□ -2.06
VPS8YAL002W NUS1Q12063 375 aa2.18□□□□□ -2.06
VPS8YAL002W SMF3Q12078 473 aaPredicted RBP2.18□□□□□ -2.06
VPS8YAL002W UPC2Q12151 913 aa2.18□□□□□ -2.06
VPS8YAL002W GCN2P15442 1659 aa2.18□□□□□ -2.06
VPS8YAL002W FUM1P08417 488 aaKnown RBP2.18□□□□□ -2.06
VPS8YAL002W CDC24P11433 854 aaPredicted RBP2.18□□□□□ -2.06
VPS8YAL002W SIR1P21691 654 aa2.18□□□□□ -2.06
VPS8YAL002W YCK2P23292 546 aaKnown RBP2.18□□□□□ -2.06
VPS8YAL002W SGF29P25554 259 aa2.18□□□□□ -2.06
VPS8YAL002W SAC6P32599 642 aaKnown RBP2.18□□□□□ -2.06
VPS8YAL002W ORC2P32833 620 aa2.18□□□□□ -2.06
VPS8YAL002W YBR225WP38321 900 aa2.18□□□□□ -2.06
VPS8YAL002W YLF2P38746 405 aa2.18□□□□□ -2.06
VPS8YAL002W SSU1P41930 458 aa2.18□□□□□ -2.06
VPS8YAL002W CTF18P49956 741 aa2.18□□□□□ -2.06
VPS8YAL002W MUP1P50276 574 aa2.18□□□□□ -2.06
VPS8YAL002W CIK1Q01649 594 aa2.18□□□□□ -2.06
VPS8YAL002W HOT1Q03213 719 aa2.18□□□□□ -2.06
VPS8YAL002W PLB2Q03674 706 aa2.18□□□□□ -2.06
VPS8YAL002W MCM21Q06675 368 aa2.18□□□□□ -2.06
VPS8YAL002W CDC45Q08032 650 aa2.18□□□□□ -2.06
VPS8YAL002W YPL216WQ08964 1102 aa2.18□□□□□ -2.06
VPS8YAL002W YDL176WQ12027 708 aa2.18□□□□□ -2.06
VPS8YAL002W DPH2P32461 534 aa2.17□□□□□ -2.06
VPS8YAL002W ATG19P35193 415 aa2.17□□□□□ -2.06
VPS8YAL002W UIP5P36137 443 aa2.17□□□□□ -2.06
VPS8YAL002W SRO77P38163 1010 aa2.17□□□□□ -2.06
VPS8YAL002W NPR3P38742 1146 aa2.17□□□□□ -2.06
VPS8YAL002W CRG1P38892 291 aaRIP-Chip data2.17□□□□□ -2.06not detected
VPS8YAL002W GSM1P42950 618 aa2.17□□□□□ -2.06
VPS8YAL002W UBX6P47049 396 aa2.17□□□□□ -2.06
VPS8YAL002W NOP9P47077 666 aaKnown RBP2.17□□□□□ -2.06
VPS8YAL002W OGG1P53397 376 aaPredicted RBP2.17□□□□□ -2.06
VPS8YAL002W TEX1P53851 422 aaKnown RBP2.17□□□□□ -2.06
VPS8YAL002W SSL2Q00578 843 aa2.17□□□□□ -2.06
VPS8YAL002W AIM32Q04689 311 aa2.17□□□□□ -2.06
VPS8YAL002W YML053CQ04978 212 aa2.17□□□□□ -2.06
VPS8YAL002W SKG3Q06315 1026 aa2.17□□□□□ -2.06
VPS8YAL002W AAD4Q07747 329 aa2.17□□□□□ -2.06
VPS8YAL002W MED7Q08278 222 aa2.17□□□□□ -2.06
VPS8YAL002W RRP36Q12481 300 aaPredicted RBP2.17□□□□□ -2.06
VPS8YAL002W VPS13Q07878 3144 aa2.17□□□□□ -2.06
VPS8YAL002W FEN2P25621 512 aaKnown RBP2.17□□□□□ -2.06
VPS8YAL002W IME2P32581 645 aa2.17□□□□□ -2.06
VPS8YAL002W OMA1P36163 345 aa2.17□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms