RNA–Protein interactions for RNA: ENST00000587563.5

RPRD1A-205, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 3

Gene RPRD1A, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-205ENST00000587563 HOXA5P20719 270 aa7.76□□□□□ -1.17
RPRD1A-205ENST00000587563 SF3B2Q13435 895 aaKnown RBP7.76□□□□□ -1.17
RPRD1A-205ENST00000587563 NKPD1Q17RQ9 610 aa7.76□□□□□ -1.17
RPRD1A-205ENST00000587563 NPAS4Q8IUM7 802 aa7.76□□□□□ -1.17
RPRD1A-205ENST00000587563 GOLGA3Q08378 1498 aa7.75□□□□□ -1.17
RPRD1A-205ENST00000587563 NEFMP07197 916 aa7.75□□□□□ -1.17
RPRD1A-205ENST00000587563 ERVK-24P63145 666 aa7.75□□□□□ -1.17
RPRD1A-205ENST00000587563 SLC26A8Q96RN1 970 aa7.75□□□□□ -1.17
RPRD1A-205ENST00000587563 CARS2Q9HA77 564 aaKnown RBP7.75□□□□□ -1.17
RPRD1A-205ENST00000587563 PRDM10Q9NQV6 1147 aa7.75□□□□□ -1.17
RPRD1A-205ENST00000587563 FHOD3Q2V2M9 1422 aa7.75□□□□□ -1.17
RPRD1A-205ENST00000587563 RAC2P15153 192 aa7.74□□□□□ -1.17
RPRD1A-205ENST00000587563 PPP2R3AQ06190 1150 aa7.74□□□□□ -1.17
RPRD1A-205ENST00000587563 MTMR3Q13615 1198 aa7.74□□□□□ -1.17
RPRD1A-205ENST00000587563 PBXIP1Q96AQ6 731 aa7.74□□□□□ -1.17
RPRD1A-205ENST00000587563 SMG5Q9UPR3 1016 aaKnown RBP7.74□□□□□ -1.17
RPRD1A-205ENST00000587563 RAPGEF3O95398 923 aa7.73□□□□□ -1.17
RPRD1A-205ENST00000587563 PRPF40BQ6NWY9 871 aaKnown RBP7.73□□□□□ -1.17
RPRD1A-205ENST00000587563 FOXQ1Q9C009 403 aa7.73□□□□□ -1.17
RPRD1A-205ENST00000587563 KIF21BO75037 1637 aa7.73□□□□□ -1.17
RPRD1A-205ENST00000587563 MAGI3Q5TCQ9 1506 aa7.73□□□□□ -1.17
RPRD1A-205ENST00000587563 SRFP11831 508 aa7.72□□□□□ -1.17
RPRD1A-205ENST00000587563 LINC00310P59036 64 aa7.72□□□□□ -1.17
RPRD1A-205ENST00000587563 FKBP4Q02790 459 aaKnown RBP eCLIP7.72□□□□□ -1.17
RPRD1A-205ENST00000587563 KCNN1Q92952 543 aa7.72□□□□□ -1.17
RPRD1A-205ENST00000587563 KCNB2Q92953 911 aa7.72□□□□□ -1.17
RPRD1A-205ENST00000587563 C20orf173Q96LM9 149 aa7.72□□□□□ -1.17
RPRD1A-205ENST00000587563 PARD6AQ9NPB6 346 aa7.72□□□□□ -1.17
RPRD1A-205ENST00000587563 CCDC87Q9NVE4 849 aa7.72□□□□□ -1.17
RPRD1A-205ENST00000587563 TRAK1Q9UPV9 953 aa7.72□□□□□ -1.17
RPRD1A-205ENST00000587563 MAPK8IP1Q9UQF2 711 aa7.72□□□□□ -1.17
RPRD1A-205ENST00000587563 NUP153P49790 1475 aaKnown RBP7.72□□□□□ -1.17
RPRD1A-205ENST00000587563 TEX14Q8IWB6 1497 aa7.72□□□□□ -1.17
RPRD1A-205ENST00000587563 SAMD9Q5K651 1589 aa7.71□□□□□ -1.17
RPRD1A-205ENST00000587563 ETV2O00321 342 aaPredicted RBP7.71□□□□□ -1.18
RPRD1A-205ENST00000587563 ZC3H12AQ5D1E8 599 aaKnown RBP7.71□□□□□ -1.18
RPRD1A-205ENST00000587563 ABCB6Q9NP58 842 aa7.71□□□□□ -1.18
RPRD1A-205ENST00000587563 PRDM5Q9NQX1 630 aaPredicted RBP7.71□□□□□ -1.18
RPRD1A-205ENST00000587563 C19orf73Q9NVV2 129 aa7.71□□□□□ -1.18
RPRD1A-205ENST00000587563 ABHD4Q8TB40 342 aa7.7□□□□□ -1.18
RPRD1A-205ENST00000587563 LMTK3Q96Q04 1460 aa7.69□□□□□ -1.18
RPRD1A-205ENST00000587563 TMEM238LA0A1B0GVL6 79 aa7.69□□□□□ -1.18
RPRD1A-205ENST00000587563 ZNF157P51786 506 aaPredicted RBP7.69□□□□□ -1.18
RPRD1A-205ENST00000587563 ZCCHC4Q9H5U6 513 aa7.69□□□□□ -1.18
RPRD1A-205ENST00000587563 NPHS2Q9NP85 383 aa7.69□□□□□ -1.18
RPRD1A-205ENST00000587563 TMEM39AQ9NV64 488 aa7.69□□□□□ -1.18
RPRD1A-205ENST00000587563 RAPGEF6Q8TEU7 1601 aa7.68□□□□□ -1.18
RPRD1A-205ENST00000587563 FAM155AB1AL88 458 aaPredicted RBP7.68□□□□□ -1.18
RPRD1A-205ENST00000587563 FOXD2O60548 495 aaPredicted RBP7.68□□□□□ -1.18
RPRD1A-205ENST00000587563 CPNE3O75131 537 aaKnown RBP7.68□□□□□ -1.18
RPRD1A-205ENST00000587563 FAAP100Q0VG06 881 aa7.68□□□□□ -1.18
RPRD1A-205ENST00000587563 ALPK1Q96QP1 1244 aa7.68□□□□□ -1.18
RPRD1A-205ENST00000587563 CFAP43Q8NDM7 1665 aa7.67□□□□□ -1.18
RPRD1A-205ENST00000587563 SYN1P17600 705 aa7.67□□□□□ -1.18
RPRD1A-205ENST00000587563 USPL1Q5W0Q7 1092 aa7.67□□□□□ -1.18
RPRD1A-205ENST00000587563 ERICH6Q7L0X2 663 aa7.67□□□□□ -1.18
RPRD1A-205ENST00000587563 PDZD3Q86UT5 571 aa7.67□□□□□ -1.18
RPRD1A-205ENST00000587563 KCT2Q8NC54 265 aa7.67□□□□□ -1.18
RPRD1A-205ENST00000587563 IRF2BPLQ9H1B7 796 aa7.67□□□□□ -1.18
RPRD1A-205ENST00000587563 ATP13A1Q9HD20 1204 aa7.67□□□□□ -1.18
RPRD1A-205ENST00000587563 SEMA3GQ9NS98 782 aa7.67□□□□□ -1.18
RPRD1A-205ENST00000587563 CDK13Q14004 1512 aaKnown RBP7.67□□□□□ -1.18
RPRD1A-205ENST00000587563 ARAP3Q8WWN8 1544 aa7.67□□□□□ -1.18
RPRD1A-205ENST00000587563 ABCA9Q8IUA7 1624 aa7.67□□□□□ -1.18
RPRD1A-205ENST00000587563 SSFA2P28290 1259 aa7.66□□□□□ -1.18
RPRD1A-205ENST00000587563 C22orf34Q6ZV56 151 aa7.66□□□□□ -1.18
RPRD1A-205ENST00000587563 BORCS6Q96GS4 357 aa7.66□□□□□ -1.18
RPRD1A-205ENST00000587563 HSPA12BQ96MM6 686 aa7.66□□□□□ -1.18
RPRD1A-205ENST00000587563 EMILIN2Q9BXX0 1053 aa7.66□□□□□ -1.18
RPRD1A-205ENST00000587563 PICK1Q9NRD5 415 aa7.66□□□□□ -1.18
RPRD1A-205ENST00000587563 GPN3Q9UHW5 284 aaPredicted RBP7.66□□□□□ -1.18
RPRD1A-205ENST00000587563 FRMPD1Q5SYB0 1578 aa7.66□□□□□ -1.18
RPRD1A-205ENST00000587563 EOMESO95936 686 aa7.65□□□□□ -1.18
RPRD1A-205ENST00000587563 EEA1Q15075 1411 aa7.65□□□□□ -1.18
RPRD1A-205ENST00000587563 CDC37L1Q7L3B6 337 aa7.65□□□□□ -1.18
RPRD1A-205ENST00000587563 PPP4R2Q9NY27 417 aa7.65□□□□□ -1.18
RPRD1A-205ENST00000587563 SIGLEC1Q9BZZ2 1709 aa7.64□□□□□ -1.19
RPRD1A-205ENST00000587563 GADD45BO75293 160 aaPredicted RBP7.64□□□□□ -1.19
RPRD1A-205ENST00000587563 PDE3BQ13370 1112 aa7.64□□□□□ -1.19
RPRD1A-205ENST00000587563 THAP5Q7Z6K1 395 aa7.64□□□□□ -1.19
RPRD1A-205ENST00000587563 MFSD4AQ8N468 514 aa7.64□□□□□ -1.19
RPRD1A-205ENST00000587563 ACSBG1Q96GR2 724 aa7.64□□□□□ -1.19
RPRD1A-205ENST00000587563 BRPF3Q9ULD4 1205 aa7.64□□□□□ -1.19
RPRD1A-205ENST00000587563 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.63□□□□□ -1.19
RPRD1A-205ENST00000587563 ARHGAP35Q9NRY4 1499 aa7.63□□□□□ -1.19
RPRD1A-205ENST00000587563 YEATS2Q9ULM3 1422 aa7.63□□□□□ -1.19
RPRD1A-205ENST00000587563 PLEKHD1A6NEE1 506 aa7.63□□□□□ -1.19
RPRD1A-205ENST00000587563 FANCGO15287 622 aa7.63□□□□□ -1.19
RPRD1A-205ENST00000587563 BMP7P18075 431 aa7.63□□□□□ -1.19
RPRD1A-205ENST00000587563 ARNTP27540 789 aa7.63□□□□□ -1.19
RPRD1A-205ENST00000587563 NFIXQ14938 502 aa7.63□□□□□ -1.19
RPRD1A-205ENST00000587563 DTHD1Q6ZMT9 781 aa7.63□□□□□ -1.19
RPRD1A-205ENST00000587563 SULF2Q8IWU5 870 aa7.63□□□□□ -1.19
RPRD1A-205ENST00000587563 MYLIPQ8WY64 445 aa7.63□□□□□ -1.19
RPRD1A-205ENST00000587563 DNAJC25Q9H1X3 360 aa7.63□□□□□ -1.19
RPRD1A-205ENST00000587563 TIMELESSQ9UNS1 1208 aa7.63□□□□□ -1.19
RPRD1A-205ENST00000587563 GTF3C3Q9Y5Q9 886 aa7.63□□□□□ -1.19
RPRD1A-205ENST00000587563 TTC37Q6PGP7 1564 aa7.63□□□□□ -1.19
RPRD1A-205ENST00000587563 XRCC5P13010 732 aaKnown RBP7.62□□□□□ -1.19
RPRD1A-205ENST00000587563 SFRP5Q5T4F7 317 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms