RNA–Protein interactions for RNA: ENST00000587563.5

RPRD1A-205, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 3

Gene RPRD1A, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-205ENST00000587563 AEBP2Q6ZN18 517 aaPredicted RBP31.95■■■□□ 2.71
RPRD1A-205ENST00000587563 CHIC1Q5VXU3 224 aa30.1■■■□□ 2.41
RPRD1A-205ENST00000587563 SENP3Q9H4L4 574 aaPredicted RBP27.54■■■□□ 2
RPRD1A-205ENST00000587563 PHF23Q9BUL5 403 aaPredicted RBP27.02■■□□□ 1.92
RPRD1A-205ENST00000587563 FOXD1Q16676 465 aa25.57■■□□□ 1.68
RPRD1A-205ENST00000587563 MSH5O43196 834 aa24.26■■□□□ 1.47
RPRD1A-205ENST00000587563 POTEDQ86YR6 584 aa24.24■■□□□ 1.47
RPRD1A-205ENST00000587563 PLPPR3Q6T4P5 718 aa23.91■■□□□ 1.42
RPRD1A-205ENST00000587563 PIAS4Q8N2W9 510 aaPredicted RBP23.87■■□□□ 1.41
RPRD1A-205ENST00000587563 PPP6R1Q9UPN7 881 aa23.52■■□□□ 1.36
RPRD1A-205ENST00000587563 ADRA2BP18089 450 aa23.45■■□□□ 1.34
RPRD1A-205ENST00000587563 DMRT2Q9Y5R5 561 aa21.71■■□□□ 1.07
RPRD1A-205ENST00000587563 SCAF1Q9H7N4 1312 aaKnown RBP21.71■■□□□ 1.07
RPRD1A-205ENST00000587563 MAPK8IP2Q13387 824 aaPredicted RBP21.63■■□□□ 1.05
RPRD1A-205ENST00000587563 CACNB1Q02641 598 aaPredicted RBP21.03■□□□□ 0.96
RPRD1A-205ENST00000587563 DCAF8L1A6NGE4 600 aa20.85■□□□□ 0.93
RPRD1A-205ENST00000587563 PPP4R3CPQ6ZMV5 832 aa20.84■□□□□ 0.93
RPRD1A-205ENST00000587563 HOXD11P31277 338 aaPredicted RBP20.76■□□□□ 0.91
RPRD1A-205ENST00000587563 CNKSR2Q8WXI2 1034 aa20.61■□□□□ 0.89
RPRD1A-205ENST00000587563 RNF39Q9H2S5 420 aa20.57■□□□□ 0.88
RPRD1A-205ENST00000587563 RNF216Q9NWF9 866 aaPredicted RBP20.52■□□□□ 0.88
RPRD1A-205ENST00000587563 C1QBPQ07021 282 aaKnown RBP20.33■□□□□ 0.85
RPRD1A-205ENST00000587563 DNAJC5BQ9UF47 199 aa20.24■□□□□ 0.83
RPRD1A-205ENST00000587563 NCBP3Q53F19 620 aaKnown RBP20.05■□□□□ 0.8
RPRD1A-205ENST00000587563 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.81■□□□□ 0.76
RPRD1A-205ENST00000587563 NPM3O75607 178 aaKnown RBP19.58■□□□□ 0.72
RPRD1A-205ENST00000587563 U3KPZ7 1027 aaPredicted RBP19.25■□□□□ 0.67
RPRD1A-205ENST00000587563 CAPN15O75808 1086 aa19.16■□□□□ 0.66
RPRD1A-205ENST00000587563 DSG3P32926 999 aa19.1■□□□□ 0.65
RPRD1A-205ENST00000587563 SPINK5Q9NQ38 1064 aaPredicted RBP19.07■□□□□ 0.64
RPRD1A-205ENST00000587563 POTEHQ6S545 545 aa18.96■□□□□ 0.63
RPRD1A-205ENST00000587563 APLP2Q06481 763 aa18.94■□□□□ 0.62
RPRD1A-205ENST00000587563 KCNA4P22459 653 aa18.8■□□□□ 0.6
RPRD1A-205ENST00000587563 ZNF219Q9P2Y4 722 aaPredicted RBP18.79■□□□□ 0.6
RPRD1A-205ENST00000587563 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.78■□□□□ 0.6
RPRD1A-205ENST00000587563 HNRNPUL2Q1KMD3 747 aaKnown RBP18.78■□□□□ 0.6
RPRD1A-205ENST00000587563 SLC4A2P04920 1241 aa18.77■□□□□ 0.6
RPRD1A-205ENST00000587563 TRHP20396 242 aaPredicted RBP18.73■□□□□ 0.59
RPRD1A-205ENST00000587563 ABCB7O75027 752 aa18.6■□□□□ 0.57
RPRD1A-205ENST00000587563 SAMD1Q6SPF0 538 aaPredicted RBP18.59■□□□□ 0.57
RPRD1A-205ENST00000587563 RBM42Q9BTD8 480 aaKnown RBP18.4■□□□□ 0.54
RPRD1A-205ENST00000587563 MYCNP04198 464 aaPredicted RBP18.23■□□□□ 0.51
RPRD1A-205ENST00000587563 POLA2Q14181 598 aa18.13■□□□□ 0.49
RPRD1A-205ENST00000587563 CHRDL2Q6WN34 429 aa18.05■□□□□ 0.48
RPRD1A-205ENST00000587563 ZBTB12Q9Y330 459 aaPredicted RBP17.89■□□□□ 0.45
RPRD1A-205ENST00000587563 AKT1S1Q96B36 256 aa17.83■□□□□ 0.44
RPRD1A-205ENST00000587563 FOXD4L1Q9NU39 408 aa17.78■□□□□ 0.44
RPRD1A-205ENST00000587563 SLC4A1APQ9BWU0 796 aaKnown RBP17.75■□□□□ 0.43
RPRD1A-205ENST00000587563 ATF5Q9Y2D1 282 aaPredicted RBP17.65■□□□□ 0.42
RPRD1A-205ENST00000587563 REM2Q8IYK8 340 aaPredicted RBP17.59■□□□□ 0.41
RPRD1A-205ENST00000587563 SP7Q8TDD2 431 aaPredicted RBP17.59■□□□□ 0.41
RPRD1A-205ENST00000587563 OSCARQ8IYS5 282 aa17.53■□□□□ 0.4
RPRD1A-205ENST00000587563 PIP4P2Q8N4L2 257 aa17.49■□□□□ 0.39
RPRD1A-205ENST00000587563 PITPNM1O00562 1244 aa17.38■□□□□ 0.37
RPRD1A-205ENST00000587563 ATXN8OSP0DMR3 200 aa17.35■□□□□ 0.37
RPRD1A-205ENST00000587563 HAX1O00165 279 aa17.34■□□□□ 0.37
RPRD1A-205ENST00000587563 FXR2P51116 673 aaKnown RBP eCLIP17.34■□□□□ 0.37
RPRD1A-205ENST00000587563 SPDYE2BA6NHP3 402 aa17.24■□□□□ 0.35
RPRD1A-205ENST00000587563 SPDYE6P0CI01 402 aa17.24■□□□□ 0.35
RPRD1A-205ENST00000587563 SPDYE2Q495Y8 402 aa17.24■□□□□ 0.35
RPRD1A-205ENST00000587563 FBLN2P98095 1184 aa17.23■□□□□ 0.35
RPRD1A-205ENST00000587563 ZBTB22O15209 634 aa17.2■□□□□ 0.34
RPRD1A-205ENST00000587563 SPDYE1Q8NFV5 336 aaPredicted RBP17.05■□□□□ 0.32
RPRD1A-205ENST00000587563 CLEC11AQ9Y240 323 aa16.97■□□□□ 0.31
RPRD1A-205ENST00000587563 PRKAR2AP13861 404 aaKnown RBP16.96■□□□□ 0.31
RPRD1A-205ENST00000587563 EVX2Q03828 476 aa16.92■□□□□ 0.3
RPRD1A-205ENST00000587563 ZNF692Q9BU19 519 aaPredicted RBP16.92■□□□□ 0.3
RPRD1A-205ENST00000587563 SSUH2Q9Y2M2 353 aa16.88■□□□□ 0.29
RPRD1A-205ENST00000587563 MKRN4PQ13434 485 aaPredicted RBP16.84■□□□□ 0.29
RPRD1A-205ENST00000587563 C19orf67A6NJJ6 358 aa16.8■□□□□ 0.28
RPRD1A-205ENST00000587563 PRR29P0C7W0 189 aa16.67■□□□□ 0.26
RPRD1A-205ENST00000587563 GABBR2O75899 941 aa16.64■□□□□ 0.25
RPRD1A-205ENST00000587563 PABPN1Q86U42 306 aaKnown RBP eCLIP16.62■□□□□ 0.25
RPRD1A-205ENST00000587563 CHADLQ6NUI6 762 aa16.6■□□□□ 0.25
RPRD1A-205ENST00000587563 LHX8Q68G74 356 aa16.5■□□□□ 0.23
RPRD1A-205ENST00000587563 CLCN6P51797 869 aa16.46■□□□□ 0.23
RPRD1A-205ENST00000587563 CD44P16070 742 aaKnown RBP16.41■□□□□ 0.22
RPRD1A-205ENST00000587563 FARP1Q9Y4F1 1045 aaPredicted RBP16.39■□□□□ 0.21
RPRD1A-205ENST00000587563 STAG3Q9UJ98 1225 aa16.22■□□□□ 0.19
RPRD1A-205ENST00000587563 POTEIP0CG38 1075 aa16.2■□□□□ 0.18
RPRD1A-205ENST00000587563 DCBLD2Q96PD2 775 aa16.2■□□□□ 0.18
RPRD1A-205ENST00000587563 ZNF579Q8NAF0 562 aaKnown RBP16.15■□□□□ 0.18
RPRD1A-205ENST00000587563 ZRANB1Q9UGI0 708 aa16.11■□□□□ 0.17
RPRD1A-205ENST00000587563 CSRNP3Q8WYN3 585 aa16.09■□□□□ 0.17
RPRD1A-205ENST00000587563 CREBZFQ9NS37 354 aa16.06■□□□□ 0.16
RPRD1A-205ENST00000587563 PAK3O75914 559 aaPredicted RBP16.02■□□□□ 0.16
RPRD1A-205ENST00000587563 SPDYE4A6NLX3 237 aa15.95■□□□□ 0.14
RPRD1A-205ENST00000587563 NPM1P06748 294 aaKnown RBP eCLIP15.92■□□□□ 0.14
RPRD1A-205ENST00000587563 GALR2O43603 387 aaPredicted RBP15.9■□□□□ 0.14
RPRD1A-205ENST00000587563 PHF12Q96QT6 1004 aa15.77■□□□□ 0.12
RPRD1A-205ENST00000587563 PLSCR2Q9NRY7 297 aa15.76■□□□□ 0.11
RPRD1A-205ENST00000587563 OTUD5Q96G74 571 aa15.73■□□□□ 0.11
RPRD1A-205ENST00000587563 MNX1P50219 401 aaPredicted RBP15.71■□□□□ 0.11
RPRD1A-205ENST00000587563 EHMT2Q96KQ7 1210 aa15.66■□□□□ 0.1
RPRD1A-205ENST00000587563 POTEB2H3BUK9 544 aa15.65■□□□□ 0.1
RPRD1A-205ENST00000587563 ASTLQ6HA08 431 aaPredicted RBP15.61■□□□□ 0.09
RPRD1A-205ENST00000587563 SLC39A7Q92504 469 aa15.6■□□□□ 0.09
RPRD1A-205ENST00000587563 C7P10643 843 aa15.59■□□□□ 0.09
RPRD1A-205ENST00000587563 PELP1Q8IZL8 1130 aaKnown RBP15.58■□□□□ 0.08
RPRD1A-205ENST00000587563 MS4A3Q96HJ5 214 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms