RNA–Protein interactions for RNA: ENST00000514232.1

SMARCAD1-208, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, human

TSL 3

Gene SMARCAD1, Length 444 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCAD1-208	ENST00000514232	FAM155A	B1AL88	458 aa	Predicted RBP	4.16	□□□□□ -1.74
SMARCAD1-208	ENST00000514232	RGS19	P49795	217 aa		4.16	□□□□□ -1.74
SMARCAD1-208	ENST00000514232	MFSD4A	Q8N468	514 aa		4.16	□□□□□ -1.74
SMARCAD1-208	ENST00000514232	RNF214	Q8ND24	703 aa		4.16	□□□□□ -1.74
SMARCAD1-208	ENST00000514232	ZNF576	Q9H609	170 aa		4.16	□□□□□ -1.74
SMARCAD1-208	ENST00000514232	VRTN	Q9H8Y1	702 aa		4.16	□□□□□ -1.74
SMARCAD1-208	ENST00000514232	CAPN6	Q9Y6Q1	641 aa		4.16	□□□□□ -1.74
SMARCAD1-208	ENST00000514232	N4BP3	O15049	544 aa		4.15	□□□□□ -1.75
SMARCAD1-208	ENST00000514232	TNFRSF21	O75509	655 aa		4.15	□□□□□ -1.75
SMARCAD1-208	ENST00000514232	ZNF20	P17024	532 aa		4.15	□□□□□ -1.75
SMARCAD1-208	ENST00000514232	NTF4	P34130	210 aa		4.15	□□□□□ -1.75
SMARCAD1-208	ENST00000514232	UBE3D	Q7Z6J8	389 aa		4.15	□□□□□ -1.75
SMARCAD1-208	ENST00000514232	FAM129C	Q86XR2	697 aa		4.15	□□□□□ -1.75
SMARCAD1-208	ENST00000514232	PDZD8	Q8NEN9	1154 aa		4.15	□□□□□ -1.75
SMARCAD1-208	ENST00000514232	SSU72	Q9NP77	194 aa	Known RBP	4.15	□□□□□ -1.75
SMARCAD1-208	ENST00000514232	KRT82	Q9NSB4	513 aa		4.15	□□□□□ -1.75
SMARCAD1-208	ENST00000514232	PHACTR2	O75167	634 aa		4.14	□□□□□ -1.75
SMARCAD1-208	ENST00000514232	NAA30	Q147X3	362 aa	Predicted RBP	4.14	□□□□□ -1.75
SMARCAD1-208	ENST00000514232	NR0B2	Q15466	257 aa		4.14	□□□□□ -1.75
SMARCAD1-208	ENST00000514232	ZC3H12A	Q5D1E8	599 aa	Known RBP	4.14	□□□□□ -1.75
SMARCAD1-208	ENST00000514232	CFAP70	Q5T0N1	1121 aa		4.14	□□□□□ -1.75
SMARCAD1-208	ENST00000514232	C14orf37	Q86TY3	774 aa		4.14	□□□□□ -1.75
SMARCAD1-208	ENST00000514232	EDEM1	Q92611	657 aa		4.14	□□□□□ -1.75
SMARCAD1-208	ENST00000514232	UBE2F	Q969M7	185 aa		4.14	□□□□□ -1.75
SMARCAD1-208	ENST00000514232	ZC3H12C	Q9C0D7	883 aa	Known RBP	4.14	□□□□□ -1.75
SMARCAD1-208	ENST00000514232	HRK	O00198	91 aa		4.13	□□□□□ -1.75
SMARCAD1-208	ENST00000514232	PDGFA	P04085	211 aa		4.13	□□□□□ -1.75
SMARCAD1-208	ENST00000514232	ITGB3	P05106	788 aa		4.13	□□□□□ -1.75
SMARCAD1-208	ENST00000514232	PDE6B	P35913	854 aa		4.13	□□□□□ -1.75
SMARCAD1-208	ENST00000514232	UBXN11	Q5T124	520 aa		4.13	□□□□□ -1.75
SMARCAD1-208	ENST00000514232	CNKSR3	Q6P9H4	555 aa		4.13	□□□□□ -1.75
SMARCAD1-208	ENST00000514232	SHISA4	Q96DD7	197 aa		4.13	□□□□□ -1.75
SMARCAD1-208	ENST00000514232	RBM15	Q96T37	977 aa	Known RBP eCLIP	4.13	□□□□□ -1.75
SMARCAD1-208	ENST00000514232	CNTD2	Q9H8S5	307 aa		4.13	□□□□□ -1.75
SMARCAD1-208	ENST00000514232	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	4.12	□□□□□ -1.75
SMARCAD1-208	ENST00000514232	ZGLP1	P0C6A0	271 aa		4.12	□□□□□ -1.75
SMARCAD1-208	ENST00000514232	ERVK-24	P63145	666 aa		4.12	□□□□□ -1.75
SMARCAD1-208	ENST00000514232	SNX29	Q8TEQ0	813 aa		4.12	□□□□□ -1.75
SMARCAD1-208	ENST00000514232	FOXD3	Q9UJU5	478 aa	Predicted RBP	4.12	□□□□□ -1.75
SMARCAD1-208	ENST00000514232	PRMT3	O60678	531 aa		4.11	□□□□□ -1.75
SMARCAD1-208	ENST00000514232	SLITRK5	O94991	958 aa		4.11	□□□□□ -1.75
SMARCAD1-208	ENST00000514232	ITPKA	P23677	461 aa		4.11	□□□□□ -1.75
SMARCAD1-208	ENST00000514232	SLURP1	P55000	103 aa		4.11	□□□□□ -1.75
SMARCAD1-208	ENST00000514232	SRSF3	P84103	164 aa	Known RBP	4.11	□□□□□ -1.75
SMARCAD1-208	ENST00000514232	FGD1	P98174	961 aa		4.11	□□□□□ -1.75
SMARCAD1-208	ENST00000514232	C8orf34	Q49A92	452 aa		4.11	□□□□□ -1.75
SMARCAD1-208	ENST00000514232	TMPRSS7	Q7RTY8	843 aa		4.11	□□□□□ -1.75
SMARCAD1-208	ENST00000514232	FERMT3	Q86UX7	667 aa		4.11	□□□□□ -1.75
SMARCAD1-208	ENST00000514232	FAM200A	Q8TCP9	573 aa		4.11	□□□□□ -1.75
SMARCAD1-208	ENST00000514232	MKNK1	Q9BUB5	465 aa		4.11	□□□□□ -1.75
SMARCAD1-208	ENST00000514232	ZSWIM5	Q9P217	1185 aa		4.11	□□□□□ -1.75
SMARCAD1-208	ENST00000514232	AMOTL2	Q9Y2J4	779 aa		4.11	□□□□□ -1.75
SMARCAD1-208	ENST00000514232	RBAK-RBAKDN	I3L0D1	243 aa		4.1	□□□□□ -1.75
SMARCAD1-208	ENST00000514232	SUPT5H	O00267	1087 aa	Known RBP	4.1	□□□□□ -1.75
SMARCAD1-208	ENST00000514232	GSTP1	P09211	210 aa	Known RBP	4.1	□□□□□ -1.75
SMARCAD1-208	ENST00000514232	KCNC1	P48547	511 aa		4.1	□□□□□ -1.75
SMARCAD1-208	ENST00000514232	DNM1	Q05193	864 aa	Known RBP	4.1	□□□□□ -1.75
SMARCAD1-208	ENST00000514232	LRCH2	Q5VUJ6	765 aa		4.1	□□□□□ -1.75
SMARCAD1-208	ENST00000514232	LIN7B	Q9HAP6	207 aa		4.1	□□□□□ -1.75
SMARCAD1-208	ENST00000514232	FITM1	A5D6W6	292 aa		4.09	□□□□□ -1.75
SMARCAD1-208	ENST00000514232	FFAR3	O14843	346 aa		4.09	□□□□□ -1.75
SMARCAD1-208	ENST00000514232	FZD7	O75084	574 aa		4.09	□□□□□ -1.75
SMARCAD1-208	ENST00000514232	SFRP5	Q5T4F7	317 aa		4.09	□□□□□ -1.75
SMARCAD1-208	ENST00000514232	PDZD3	Q86UT5	571 aa		4.09	□□□□□ -1.75
SMARCAD1-208	ENST00000514232	TTC9B	Q8N6N2	239 aa		4.09	□□□□□ -1.75
SMARCAD1-208	ENST00000514232	C1orf115	Q9H7X2	142 aa		4.09	□□□□□ -1.75
SMARCAD1-208	ENST00000514232	OR14I1	A6ND48	311 aa		4.08	□□□□□ -1.76
SMARCAD1-208	ENST00000514232	CDR1	P51861	262 aa		4.08	□□□□□ -1.76
SMARCAD1-208	ENST00000514232	ATXN1	P54253	815 aa	Known RBP	4.08	□□□□□ -1.76
SMARCAD1-208	ENST00000514232	SRPK2	P78362	688 aa	Known RBP	4.08	□□□□□ -1.76
SMARCAD1-208	ENST00000514232	CAP1	Q01518	475 aa		4.08	□□□□□ -1.76
SMARCAD1-208	ENST00000514232	KLF10	Q13118	480 aa		4.08	□□□□□ -1.76
SMARCAD1-208	ENST00000514232	SNX17	Q15036	470 aa		4.08	□□□□□ -1.76
SMARCAD1-208	ENST00000514232	ARMCX6	Q7L4S7	300 aa		4.08	□□□□□ -1.76
SMARCAD1-208	ENST00000514232	SPRED1	Q7Z699	444 aa		4.08	□□□□□ -1.76
SMARCAD1-208	ENST00000514232	CCDC82	Q8N4S0	544 aa		4.08	□□□□□ -1.76
SMARCAD1-208	ENST00000514232	OXR1	Q8N573	874 aa		4.08	□□□□□ -1.76
SMARCAD1-208	ENST00000514232	PCSK5	Q92824	1860 aa		4.08	□□□□□ -1.76
SMARCAD1-208	ENST00000514232	CCDC97	Q96F63	343 aa	Predicted RBP	4.08	□□□□□ -1.76
SMARCAD1-208	ENST00000514232	NECAB3	Q96P71	396 aa	Predicted RBP	4.08	□□□□□ -1.76
SMARCAD1-208	ENST00000514232	NOVA2	Q9UNW9	492 aa	Known RBP	4.08	□□□□□ -1.76
SMARCAD1-208	ENST00000514232	PCSK2	P16519	638 aa		4.07	□□□□□ -1.76
SMARCAD1-208	ENST00000514232	MZF1	P28698	734 aa	Predicted RBP	4.07	□□□□□ -1.76
SMARCAD1-208	ENST00000514232	STK32A	Q8WU08	396 aa		4.07	□□□□□ -1.76
SMARCAD1-208	ENST00000514232	PWWP2A	Q96N64	755 aa		4.07	□□□□□ -1.76
SMARCAD1-208	ENST00000514232	C8orf49	Q96NF6	230 aa		4.07	□□□□□ -1.76
SMARCAD1-208	ENST00000514232	ARID3A	Q99856	593 aa		4.07	□□□□□ -1.76
SMARCAD1-208	ENST00000514232	SIRT5	Q9NXA8	310 aa		4.07	□□□□□ -1.76
SMARCAD1-208	ENST00000514232	CXXC1	Q9P0U4	656 aa	Predicted RBP	4.07	□□□□□ -1.76
SMARCAD1-208	ENST00000514232	C11orf21	Q9P2W6	132 aa		4.07	□□□□□ -1.76
SMARCAD1-208	ENST00000514232	SERPINA10	Q9UK55	444 aa		4.07	□□□□□ -1.76
SMARCAD1-208	ENST00000514232	DUSP10	Q9Y6W6	482 aa		4.07	□□□□□ -1.76
SMARCAD1-208	ENST00000514232	CARNS1	A5YM72	827 aa		4.06	□□□□□ -1.76
SMARCAD1-208	ENST00000514232	WASH4P	A8MWX3	477 aa		4.06	□□□□□ -1.76
SMARCAD1-208	ENST00000514232	POLR3D	P05423	398 aa	Predicted RBP	4.06	□□□□□ -1.76
SMARCAD1-208	ENST00000514232	VIPR1	P32241	457 aa		4.06	□□□□□ -1.76
SMARCAD1-208	ENST00000514232	GALK1	P51570	392 aa		4.06	□□□□□ -1.76
SMARCAD1-208	ENST00000514232	KRTAP10-7	P60409	375 aa	Predicted RBP	4.06	□□□□□ -1.76
SMARCAD1-208	ENST00000514232	FAM69C	Q0P6D2	419 aa		4.06	□□□□□ -1.76
SMARCAD1-208	ENST00000514232	FAAP100	Q0VG06	881 aa		4.06	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms