RNA–Protein interactions for RNA: ENST00000514232.1

SMARCAD1-208, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 3

Gene SMARCAD1, Length 444 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-208ENST00000514232 AEBP2Q6ZN18 517 aaPredicted RBP22.07■■□□□ 1.12
SMARCAD1-208ENST00000514232 CHIC1Q5VXU3 224 aa20.49■□□□□ 0.87
SMARCAD1-208ENST00000514232 SENP3Q9H4L4 574 aaPredicted RBP18.88■□□□□ 0.61
SMARCAD1-208ENST00000514232 PHF23Q9BUL5 403 aaPredicted RBP18.51■□□□□ 0.55
SMARCAD1-208ENST00000514232 POTEDQ86YR6 584 aa18.09■□□□□ 0.49
SMARCAD1-208ENST00000514232 FOXD1Q16676 465 aa17.76■□□□□ 0.43
SMARCAD1-208ENST00000514232 MSH5O43196 834 aa16.9■□□□□ 0.3
SMARCAD1-208ENST00000514232 PIAS4Q8N2W9 510 aaPredicted RBP16.3■□□□□ 0.2
SMARCAD1-208ENST00000514232 PPP6R1Q9UPN7 881 aa15.93■□□□□ 0.14
SMARCAD1-208ENST00000514232 ADRA2BP18089 450 aa15.78■□□□□ 0.12
SMARCAD1-208ENST00000514232 PLPPR3Q6T4P5 718 aa15.54■□□□□ 0.08
SMARCAD1-208ENST00000514232 CACNB1Q02641 598 aaPredicted RBP15.01□□□□□ -0.01
SMARCAD1-208ENST00000514232 DMRT2Q9Y5R5 561 aa14.87□□□□□ -0.03
SMARCAD1-208ENST00000514232 MAPK8IP2Q13387 824 aaPredicted RBP14.78□□□□□ -0.04
SMARCAD1-208ENST00000514232 RNF39Q9H2S5 420 aa14.4□□□□□ -0.1
SMARCAD1-208ENST00000514232 SCAF1Q9H7N4 1312 aaKnown RBP14.35□□□□□ -0.11
SMARCAD1-208ENST00000514232 DCAF8L1A6NGE4 600 aa14.15□□□□□ -0.14
SMARCAD1-208ENST00000514232 C1QBPQ07021 282 aaKnown RBP14.09□□□□□ -0.15
SMARCAD1-208ENST00000514232 HOXD11P31277 338 aaPredicted RBP13.98□□□□□ -0.17
SMARCAD1-208ENST00000514232 POTEHQ6S545 545 aa13.97□□□□□ -0.17
SMARCAD1-208ENST00000514232 DNAJC5BQ9UF47 199 aa13.69□□□□□ -0.22
SMARCAD1-208ENST00000514232 RNF216Q9NWF9 866 aaPredicted RBP13.6□□□□□ -0.23
SMARCAD1-208ENST00000514232 PPP4R3CPQ6ZMV5 832 aa13.52□□□□□ -0.25
SMARCAD1-208ENST00000514232 CNKSR2Q8WXI2 1034 aa13.47□□□□□ -0.25
SMARCAD1-208ENST00000514232 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.2□□□□□ -0.3
SMARCAD1-208ENST00000514232 DSG3P32926 999 aa13.17□□□□□ -0.3
SMARCAD1-208ENST00000514232 SPINK5Q9NQ38 1064 aaPredicted RBP13□□□□□ -0.33
SMARCAD1-208ENST00000514232 CAPN15O75808 1086 aa12.93□□□□□ -0.34
SMARCAD1-208ENST00000514232 U3KPZ7 1027 aaPredicted RBP12.93□□□□□ -0.34
SMARCAD1-208ENST00000514232 SP7Q8TDD2 431 aaPredicted RBP12.67□□□□□ -0.38
SMARCAD1-208ENST00000514232 NCBP3Q53F19 620 aaKnown RBP12.66□□□□□ -0.38
SMARCAD1-208ENST00000514232 CHRDL2Q6WN34 429 aa12.64□□□□□ -0.39
SMARCAD1-208ENST00000514232 ABCB7O75027 752 aa12.59□□□□□ -0.39
SMARCAD1-208ENST00000514232 NPM3O75607 178 aaKnown RBP12.58□□□□□ -0.4
SMARCAD1-208ENST00000514232 TRHP20396 242 aaPredicted RBP12.51□□□□□ -0.41
SMARCAD1-208ENST00000514232 RBM42Q9BTD8 480 aaKnown RBP12.51□□□□□ -0.41
SMARCAD1-208ENST00000514232 ZNF219Q9P2Y4 722 aaPredicted RBP12.47□□□□□ -0.41
SMARCAD1-208ENST00000514232 APLP2Q06481 763 aa12.34□□□□□ -0.43
SMARCAD1-208ENST00000514232 SLC4A2P04920 1241 aa12.28□□□□□ -0.44
SMARCAD1-208ENST00000514232 PIP4P2Q8N4L2 257 aa12.17□□□□□ -0.46
SMARCAD1-208ENST00000514232 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.14□□□□□ -0.47
SMARCAD1-208ENST00000514232 HNRNPUL2Q1KMD3 747 aaKnown RBP12.14□□□□□ -0.47
SMARCAD1-208ENST00000514232 HAX1O00165 279 aa12.11□□□□□ -0.47
SMARCAD1-208ENST00000514232 AKT1S1Q96B36 256 aa12.06□□□□□ -0.48
SMARCAD1-208ENST00000514232 SAMD1Q6SPF0 538 aaPredicted RBP12.05□□□□□ -0.48
SMARCAD1-208ENST00000514232 EVX2Q03828 476 aa12.01□□□□□ -0.49
SMARCAD1-208ENST00000514232 POLA2Q14181 598 aa12.01□□□□□ -0.49
SMARCAD1-208ENST00000514232 REM2Q8IYK8 340 aaPredicted RBP11.97□□□□□ -0.49
SMARCAD1-208ENST00000514232 FXR2P51116 673 aaKnown RBP eCLIP11.96□□□□□ -0.49
SMARCAD1-208ENST00000514232 PITPNM1O00562 1244 aa11.87□□□□□ -0.51
SMARCAD1-208ENST00000514232 LHX8Q68G74 356 aa11.84□□□□□ -0.51
SMARCAD1-208ENST00000514232 PLSCR2Q9NRY7 297 aa11.79□□□□□ -0.52
SMARCAD1-208ENST00000514232 OSCARQ8IYS5 282 aa11.68□□□□□ -0.54
SMARCAD1-208ENST00000514232 ZBTB12Q9Y330 459 aaPredicted RBP11.66□□□□□ -0.54
SMARCAD1-208ENST00000514232 GABBR2O75899 941 aa11.64□□□□□ -0.55
SMARCAD1-208ENST00000514232 C19orf67A6NJJ6 358 aa11.61□□□□□ -0.55
SMARCAD1-208ENST00000514232 MYCNP04198 464 aaPredicted RBP11.61□□□□□ -0.55
SMARCAD1-208ENST00000514232 KCNA4P22459 653 aa11.53□□□□□ -0.56
SMARCAD1-208ENST00000514232 PRKAR2AP13861 404 aaKnown RBP11.51□□□□□ -0.57
SMARCAD1-208ENST00000514232 ATF5Q9Y2D1 282 aaPredicted RBP11.48□□□□□ -0.57
SMARCAD1-208ENST00000514232 POTEIP0CG38 1075 aa11.45□□□□□ -0.58
SMARCAD1-208ENST00000514232 SPDYE2BA6NHP3 402 aa11.26□□□□□ -0.61
SMARCAD1-208ENST00000514232 SPDYE6P0CI01 402 aa11.26□□□□□ -0.61
SMARCAD1-208ENST00000514232 SPDYE2Q495Y8 402 aa11.26□□□□□ -0.61
SMARCAD1-208ENST00000514232 SPDYE1Q8NFV5 336 aaPredicted RBP11.26□□□□□ -0.61
SMARCAD1-208ENST00000514232 CLEC11AQ9Y240 323 aa11.24□□□□□ -0.61
SMARCAD1-208ENST00000514232 POTEMA6NI47 508 aa11.2□□□□□ -0.62
SMARCAD1-208ENST00000514232 CHADLQ6NUI6 762 aa11.19□□□□□ -0.62
SMARCAD1-208ENST00000514232 OTUD5Q96G74 571 aa11.17□□□□□ -0.62
SMARCAD1-208ENST00000514232 POTEGQ6S5H5 508 aa11.14□□□□□ -0.63
SMARCAD1-208ENST00000514232 CLCN6P51797 869 aa11.1□□□□□ -0.63
SMARCAD1-208ENST00000514232 CD44P16070 742 aaKnown RBP11.08□□□□□ -0.64
SMARCAD1-208ENST00000514232 SSUH2Q9Y2M2 353 aa11.07□□□□□ -0.64
SMARCAD1-208ENST00000514232 POTEB2H3BUK9 544 aa11.05□□□□□ -0.64
SMARCAD1-208ENST00000514232 DCBLD2Q96PD2 775 aa11.05□□□□□ -0.64
SMARCAD1-208ENST00000514232 PCDH10Q9P2E7 1040 aa11.05□□□□□ -0.64
SMARCAD1-208ENST00000514232 FOXD4L1Q9NU39 408 aa11□□□□□ -0.65
SMARCAD1-208ENST00000514232 FBLN2P98095 1184 aa10.96□□□□□ -0.65
SMARCAD1-208ENST00000514232 PRR29P0C7W0 189 aa10.94□□□□□ -0.66
SMARCAD1-208ENST00000514232 ZNF692Q9BU19 519 aaPredicted RBP10.94□□□□□ -0.66
SMARCAD1-208ENST00000514232 FARP1Q9Y4F1 1045 aaPredicted RBP10.94□□□□□ -0.66
SMARCAD1-208ENST00000514232 MKRN4PQ13434 485 aaPredicted RBP10.92□□□□□ -0.66
SMARCAD1-208ENST00000514232 ZNF579Q8NAF0 562 aaKnown RBP10.92□□□□□ -0.66
SMARCAD1-208ENST00000514232 LCE2DQ5TA82 110 aaPredicted RBP10.88□□□□□ -0.67
SMARCAD1-208ENST00000514232 GALR2O43603 387 aaPredicted RBP10.84□□□□□ -0.67
SMARCAD1-208ENST00000514232 PABPN1Q86U42 306 aaKnown RBP eCLIP10.77□□□□□ -0.69
SMARCAD1-208ENST00000514232 ZRANB1Q9UGI0 708 aa10.77□□□□□ -0.69
SMARCAD1-208ENST00000514232 POTEJP0CG39 1038 aa10.76□□□□□ -0.69
SMARCAD1-208ENST00000514232 ATXN8OSP0DMR3 200 aa10.76□□□□□ -0.69
SMARCAD1-208ENST00000514232 PELP1Q8IZL8 1130 aaKnown RBP10.75□□□□□ -0.69
SMARCAD1-208ENST00000514232 ZBTB22O15209 634 aa10.64□□□□□ -0.71
SMARCAD1-208ENST00000514232 FAM163AQ96GL9 167 aaPredicted RBP10.64□□□□□ -0.71
SMARCAD1-208ENST00000514232 SLC4A1APQ9BWU0 796 aaKnown RBP10.64□□□□□ -0.71
SMARCAD1-208ENST00000514232 METRNQ9UJH8 293 aa10.61□□□□□ -0.71
SMARCAD1-208ENST00000514232 MAMSTRQ6ZN01 415 aa10.6□□□□□ -0.71
SMARCAD1-208ENST00000514232 PHF12Q96QT6 1004 aa10.58□□□□□ -0.72
SMARCAD1-208ENST00000514232 ASTLQ6HA08 431 aaPredicted RBP10.57□□□□□ -0.72
SMARCAD1-208ENST00000514232 C7P10643 843 aa10.55□□□□□ -0.72
SMARCAD1-208ENST00000514232 CDAN1Q8IWY9 1227 aa10.55□□□□□ -0.72
SMARCAD1-208ENST00000514232 CREBZFQ9NS37 354 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms