RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 MLKLQ8NB16 471 aa10.6□□□□□ -0.71
CPNE4-210ENST00000512332 SPATA20Q8TB22 786 aa10.6□□□□□ -0.71
CPNE4-210ENST00000512332 SDR42E1Q8WUS8 393 aa10.6□□□□□ -0.71
CPNE4-210ENST00000512332 DACH1Q9UI36 760 aa10.6□□□□□ -0.71
CPNE4-210ENST00000512332 CNTNAP4Q9C0A0 1308 aa10.6□□□□□ -0.71
CPNE4-210ENST00000512332 MINDY4BA8MYZ0 360 aa10.6□□□□□ -0.71
CPNE4-210ENST00000512332 CCP110O43303 1012 aa10.6□□□□□ -0.71
CPNE4-210ENST00000512332 UBASH3AP57075 661 aa10.6□□□□□ -0.71
CPNE4-210ENST00000512332 AKAP17AQ02040 695 aaKnown RBP10.6□□□□□ -0.71
CPNE4-210ENST00000512332 POSTNQ15063 836 aa10.6□□□□□ -0.71
CPNE4-210ENST00000512332 E4F1Q66K89 784 aaPredicted RBP10.6□□□□□ -0.71
CPNE4-210ENST00000512332 CATIPQ7Z7H3 387 aa10.6□□□□□ -0.71
CPNE4-210ENST00000512332 IQCA1Q86XH1 822 aa10.6□□□□□ -0.71
CPNE4-210ENST00000512332 KIF18AQ8NI77 898 aa10.6□□□□□ -0.71
CPNE4-210ENST00000512332 NUP133Q8WUM0 1156 aa10.6□□□□□ -0.71
CPNE4-210ENST00000512332 PHF20Q9BVI0 1012 aa10.6□□□□□ -0.71
CPNE4-210ENST00000512332 COL1A1P02452 1464 aaPredicted RBP10.6□□□□□ -0.71
CPNE4-210ENST00000512332 A0A1B0GUL6 1792 aa10.6□□□□□ -0.71
CPNE4-210ENST00000512332 ORC4O43929 436 aa10.59□□□□□ -0.71
CPNE4-210ENST00000512332 DDAH1O94760 285 aa10.59□□□□□ -0.71
CPNE4-210ENST00000512332 ADAMTS2O95450 1211 aa10.59□□□□□ -0.71
CPNE4-210ENST00000512332 ATP1A3P13637 1013 aa10.59□□□□□ -0.71
CPNE4-210ENST00000512332 BMP6P22004 513 aa10.59□□□□□ -0.71
CPNE4-210ENST00000512332 NCBP1Q09161 790 aaKnown RBP10.59□□□□□ -0.71
CPNE4-210ENST00000512332 TROAPQ12815 778 aa10.59□□□□□ -0.71
CPNE4-210ENST00000512332 PKN1Q16512 942 aa10.59□□□□□ -0.71
CPNE4-210ENST00000512332 PDCL2Q8N4E4 241 aa10.59□□□□□ -0.71
CPNE4-210ENST00000512332 ENOX1Q8TC92 643 aaKnown RBP10.59□□□□□ -0.71
CPNE4-210ENST00000512332 CCDC34Q96HJ3 373 aa10.59□□□□□ -0.71
CPNE4-210ENST00000512332 TMX1Q9H3N1 280 aa10.59□□□□□ -0.71
CPNE4-210ENST00000512332 AATFQ9NY61 560 aaKnown RBP eCLIP10.59□□□□□ -0.71
CPNE4-210ENST00000512332 PCDHB6Q9Y5E3 794 aa10.59□□□□□ -0.71
CPNE4-210ENST00000512332 COL4A1P02462 1669 aa10.59□□□□□ -0.71
CPNE4-210ENST00000512332 DUOX1Q9NRD9 1551 aa10.59□□□□□ -0.71
CPNE4-210ENST00000512332 SERPINC1P01008 464 aa10.58□□□□□ -0.72
CPNE4-210ENST00000512332 NR5A1Q13285 461 aa10.58□□□□□ -0.72
CPNE4-210ENST00000512332 MORC3Q14149 939 aa10.58□□□□□ -0.72
CPNE4-210ENST00000512332 IFIT1BQ5T764 474 aaKnown RBP10.58□□□□□ -0.72
CPNE4-210ENST00000512332 RC3H1Q5TC82 1133 aaKnown RBP10.58□□□□□ -0.72
CPNE4-210ENST00000512332 CTR9Q6PD62 1173 aa10.58□□□□□ -0.72
CPNE4-210ENST00000512332 C3orf67Q6ZVT6 689 aa10.58□□□□□ -0.72
CPNE4-210ENST00000512332 VSTM4Q8IW00 320 aa10.58□□□□□ -0.72
CPNE4-210ENST00000512332 ZNF384Q8TF68 577 aa10.58□□□□□ -0.72
CPNE4-210ENST00000512332 BCL11BQ9C0K0 894 aaPredicted RBP10.58□□□□□ -0.72
CPNE4-210ENST00000512332 NYXQ9GZU5 481 aa10.58□□□□□ -0.72
CPNE4-210ENST00000512332 ANKRD2Q9GZV1 360 aa10.58□□□□□ -0.72
CPNE4-210ENST00000512332 IQSEC3Q9UPP2 1182 aaPredicted RBP10.58□□□□□ -0.72
CPNE4-210ENST00000512332 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.58□□□□□ -0.72
CPNE4-210ENST00000512332 TRIM75PA6NK02 468 aa10.58□□□□□ -0.72
CPNE4-210ENST00000512332 POLR2DO15514 142 aaKnown RBP10.58□□□□□ -0.72
CPNE4-210ENST00000512332 ACTN4O43707 911 aaKnown RBP10.58□□□□□ -0.72
CPNE4-210ENST00000512332 RPS8P62241 208 aaKnown RBP10.58□□□□□ -0.72
CPNE4-210ENST00000512332 ISM2Q6H9L7 571 aa10.58□□□□□ -0.72
CPNE4-210ENST00000512332 FCHSD1Q86WN1 690 aa10.58□□□□□ -0.72
CPNE4-210ENST00000512332 LINC00116Q8NCU8 138 aa10.58□□□□□ -0.72
CPNE4-210ENST00000512332 OXER1Q8TDS5 423 aa10.58□□□□□ -0.72
CPNE4-210ENST00000512332 FERMT2Q96AC1 680 aa10.58□□□□□ -0.72
CPNE4-210ENST00000512332 NSUN4Q96CB9 384 aaKnown RBP10.58□□□□□ -0.72
CPNE4-210ENST00000512332 CABP5Q9NP86 173 aa10.58□□□□□ -0.72
CPNE4-210ENST00000512332 ATP8A2Q9NTI2 1148 aa10.58□□□□□ -0.72
CPNE4-210ENST00000512332 FANCLQ9NW38 375 aa10.58□□□□□ -0.72
CPNE4-210ENST00000512332 MAN1B1Q9UKM7 699 aa10.58□□□□□ -0.72
CPNE4-210ENST00000512332 SCN7AQ01118 1682 aa10.58□□□□□ -0.72
CPNE4-210ENST00000512332 A0A0G2JS52 829 aa10.57□□□□□ -0.72
CPNE4-210ENST00000512332 KCNQ2O43526 872 aa10.57□□□□□ -0.72
CPNE4-210ENST00000512332 ZNF18P17022 549 aa10.57□□□□□ -0.72
CPNE4-210ENST00000512332 ERCC5P28715 1186 aaPredicted RBP10.57□□□□□ -0.72
CPNE4-210ENST00000512332 KRT2P35908 639 aa10.57□□□□□ -0.72
CPNE4-210ENST00000512332 GRIN1Q05586 938 aa10.57□□□□□ -0.72
CPNE4-210ENST00000512332 SBK1Q52WX2 424 aa10.57□□□□□ -0.72
CPNE4-210ENST00000512332 CMTR1Q8N1G2 835 aaKnown RBP10.57□□□□□ -0.72
CPNE4-210ENST00000512332 CCDC82Q8N4S0 544 aa10.57□□□□□ -0.72
CPNE4-210ENST00000512332 SMARCE1Q969G3 411 aa10.57□□□□□ -0.72
CPNE4-210ENST00000512332 L2HGDHQ9H9P8 463 aa10.57□□□□□ -0.72
CPNE4-210ENST00000512332 TRMT1Q9NXH9 659 aaKnown RBP10.57□□□□□ -0.72
CPNE4-210ENST00000512332 SERTAD1Q9UHV2 236 aa10.57□□□□□ -0.72
CPNE4-210ENST00000512332 DLEC1Q9Y238 1755 aa10.57□□□□□ -0.72
CPNE4-210ENST00000512332 DYNLL1P63167 89 aaKnown RBP10.57□□□□□ -0.72
CPNE4-210ENST00000512332 PDE4BQ07343 736 aa10.57□□□□□ -0.72
CPNE4-210ENST00000512332 CFAP100Q494V2 611 aa10.57□□□□□ -0.72
CPNE4-210ENST00000512332 TMTC3Q6ZXV5 915 aa10.57□□□□□ -0.72
CPNE4-210ENST00000512332 CELF1Q92879 486 aaKnown RBP10.57□□□□□ -0.72
CPNE4-210ENST00000512332 TNFRSF25Q93038 417 aa10.57□□□□□ -0.72
CPNE4-210ENST00000512332 SHISA4Q96DD7 197 aa10.57□□□□□ -0.72
CPNE4-210ENST00000512332 PPP1R13BQ96KQ4 1090 aa10.57□□□□□ -0.72
CPNE4-210ENST00000512332 FEZ1Q99689 392 aa10.57□□□□□ -0.72
CPNE4-210ENST00000512332 BRMS1Q9HCU9 246 aa10.57□□□□□ -0.72
CPNE4-210ENST00000512332 CGNQ9P2M7 1197 aaKnown RBP10.57□□□□□ -0.72
CPNE4-210ENST00000512332 NARFQ9UHQ1 456 aa10.57□□□□□ -0.72
CPNE4-210ENST00000512332 USP17L12C9JPN9 530 aa10.56□□□□□ -0.72
CPNE4-210ENST00000512332 USP17L21D6R901 530 aa10.56□□□□□ -0.72
CPNE4-210ENST00000512332 FOXN1O15353 648 aa10.56□□□□□ -0.72
CPNE4-210ENST00000512332 SLFN14P0C7P3 912 aa10.56□□□□□ -0.72
CPNE4-210ENST00000512332 TRAPPC10P48553 1259 aa10.56□□□□□ -0.72
CPNE4-210ENST00000512332 SPECC1Q5M775 1068 aa10.56□□□□□ -0.72
CPNE4-210ENST00000512332 PPP4R3BQ5MIZ7 849 aa10.56□□□□□ -0.72
CPNE4-210ENST00000512332 SH3RF1Q7Z6J0 888 aa10.56□□□□□ -0.72
CPNE4-210ENST00000512332 ZNF592Q92610 1267 aa10.56□□□□□ -0.72
CPNE4-210ENST00000512332 DPF2Q92785 391 aa10.56□□□□□ -0.72
CPNE4-210ENST00000512332 ERO1AQ96HE7 468 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms