RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 TRIM22Q8IYM9 498 aa10.18□□□□□ -0.78
SNCA-206ENST00000420646 MAP3K14Q99558 947 aa10.18□□□□□ -0.78
SNCA-206ENST00000420646 PCDHB6Q9Y5E3 794 aa10.18□□□□□ -0.78
SNCA-206ENST00000420646 SBF2Q86WG5 1849 aa10.18□□□□□ -0.78
SNCA-206ENST00000420646 ZNF202O95125 648 aa10.18□□□□□ -0.78
SNCA-206ENST00000420646 APBA3O96018 575 aa10.18□□□□□ -0.78
SNCA-206ENST00000420646 MMP1P03956 469 aa10.18□□□□□ -0.78
SNCA-206ENST00000420646 TFAP4Q01664 338 aa10.18□□□□□ -0.78
SNCA-206ENST00000420646 SLC39A14Q15043 492 aa10.18□□□□□ -0.78
SNCA-206ENST00000420646 PTPAQ15257 358 aa10.18□□□□□ -0.78
SNCA-206ENST00000420646 PKN1Q16512 942 aa10.18□□□□□ -0.78
SNCA-206ENST00000420646 KCNG4Q8TDN1 519 aa10.18□□□□□ -0.78
SNCA-206ENST00000420646 A0A1B0GUL6 1792 aa10.17□□□□□ -0.78
SNCA-206ENST00000420646 U2AF2P26368 475 aaKnown RBP eCLIP10.17□□□□□ -0.78
SNCA-206ENST00000420646 DOK7Q18PE1 504 aa10.17□□□□□ -0.78
SNCA-206ENST00000420646 CRY2Q49AN0 593 aa10.17□□□□□ -0.78
SNCA-206ENST00000420646 USP49Q70CQ1 688 aa10.17□□□□□ -0.78
SNCA-206ENST00000420646 NOSTRINQ8IVI9 506 aa10.17□□□□□ -0.78
SNCA-206ENST00000420646 SRBD1Q8N5C6 995 aaKnown RBP10.17□□□□□ -0.78
SNCA-206ENST00000420646 TBC1D16Q8TBP0 767 aa10.17□□□□□ -0.78
SNCA-206ENST00000420646 IL17RBQ9NRM6 502 aa10.17□□□□□ -0.78
SNCA-206ENST00000420646 CCDC39Q9UFE4 941 aa10.17□□□□□ -0.78
SNCA-206ENST00000420646 GGA1Q9UJY5 639 aa10.17□□□□□ -0.78
SNCA-206ENST00000420646 LEMD3Q9Y2U8 911 aa10.17□□□□□ -0.78
SNCA-206ENST00000420646 FOXN1O15353 648 aa10.17□□□□□ -0.78
SNCA-206ENST00000420646 DPCR1Q3MIW9 517 aa10.17□□□□□ -0.78
SNCA-206ENST00000420646 MFSD14BQ5SR56 506 aa10.17□□□□□ -0.78
SNCA-206ENST00000420646 CATIPQ7Z7H3 387 aa10.17□□□□□ -0.78
SNCA-206ENST00000420646 TRIM5Q9C035 493 aa10.17□□□□□ -0.78
SNCA-206ENST00000420646 KCNQ5Q9NR82 932 aa10.17□□□□□ -0.78
SNCA-206ENST00000420646 CHD4Q14839 1912 aa10.16□□□□□ -0.78
SNCA-206ENST00000420646 YEATS4O95619 227 aa10.16□□□□□ -0.78
SNCA-206ENST00000420646 GTF2IP78347 998 aa10.16□□□□□ -0.78
SNCA-206ENST00000420646 FUT2Q10981 343 aa10.16□□□□□ -0.78
SNCA-206ENST00000420646 SF3B2Q13435 895 aaKnown RBP10.16□□□□□ -0.78
SNCA-206ENST00000420646 RCSD1Q6JBY9 416 aa10.16□□□□□ -0.78
SNCA-206ENST00000420646 ZNF804AQ7Z570 1209 aa10.16□□□□□ -0.78
SNCA-206ENST00000420646 STAG2Q8N3U4 1231 aa10.16□□□□□ -0.78
SNCA-206ENST00000420646 PDILTQ8N807 584 aa10.16□□□□□ -0.78
SNCA-206ENST00000420646 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.16□□□□□ -0.78
SNCA-206ENST00000420646 LY75O60449 1722 aa10.16□□□□□ -0.78
SNCA-206ENST00000420646 ZNF831Q5JPB2 1677 aa10.16□□□□□ -0.78
SNCA-206ENST00000420646 BTDP43251 543 aa10.16□□□□□ -0.78
SNCA-206ENST00000420646 ATL3Q6DD88 541 aa10.16□□□□□ -0.78
SNCA-206ENST00000420646 TMTC2Q8N394 836 aa10.16□□□□□ -0.78
SNCA-206ENST00000420646 ATP8A2Q9NTI2 1148 aa10.16□□□□□ -0.78
SNCA-206ENST00000420646 COL24A1Q17RW2 1714 aa10.16□□□□□ -0.78
SNCA-206ENST00000420646 RGL2O15211 777 aa10.16□□□□□ -0.78
SNCA-206ENST00000420646 DEXIO95424 95 aa10.16□□□□□ -0.78
SNCA-206ENST00000420646 GOLGA8HP0CJ92 632 aa10.16□□□□□ -0.78
SNCA-206ENST00000420646 ADRA2BP18089 450 aa10.16□□□□□ -0.78
SNCA-206ENST00000420646 LRMPQ12912 555 aa10.16□□□□□ -0.78
SNCA-206ENST00000420646 PNOCQ13519 176 aa10.16□□□□□ -0.78
SNCA-206ENST00000420646 IQCB1Q15051 598 aa10.16□□□□□ -0.78
SNCA-206ENST00000420646 LONRF3Q496Y0 759 aa10.16□□□□□ -0.78
SNCA-206ENST00000420646 DRC7Q8IY82 874 aa10.16□□□□□ -0.78
SNCA-206ENST00000420646 WDR66Q8TBY9 1149 aa10.16□□□□□ -0.78
SNCA-206ENST00000420646 RBM17Q96I25 401 aaKnown RBP10.16□□□□□ -0.78
SNCA-206ENST00000420646 MKNK2Q9HBH9 465 aa10.16□□□□□ -0.78
SNCA-206ENST00000420646 MKRN1Q9UHC7 482 aaKnown RBP10.16□□□□□ -0.78
SNCA-206ENST00000420646 STX8Q9UNK0 236 aa10.16□□□□□ -0.78
SNCA-206ENST00000420646 PTGS1P23219 599 aa10.15□□□□□ -0.78
SNCA-206ENST00000420646 AKAP17AQ02040 695 aaKnown RBP10.15□□□□□ -0.78
SNCA-206ENST00000420646 PTPN21Q16825 1174 aa10.15□□□□□ -0.78
SNCA-206ENST00000420646 C12orf60Q5U649 245 aa10.15□□□□□ -0.78
SNCA-206ENST00000420646 GRAMD1CQ8IYS0 662 aa10.15□□□□□ -0.78
SNCA-206ENST00000420646 KCNF1Q9H3M0 494 aa10.15□□□□□ -0.78
SNCA-206ENST00000420646 CCDC196A0A1B0GTZ2 297 aa10.15□□□□□ -0.79
SNCA-206ENST00000420646 MMP10P09238 476 aa10.15□□□□□ -0.79
SNCA-206ENST00000420646 SYKP43405 635 aa10.15□□□□□ -0.79
SNCA-206ENST00000420646 SCNN1DP51172 638 aa10.15□□□□□ -0.79
SNCA-206ENST00000420646 PICALMQ13492 652 aa10.15□□□□□ -0.79
SNCA-206ENST00000420646 ARID5BQ14865 1188 aa10.15□□□□□ -0.79
SNCA-206ENST00000420646 SAFBQ15424 915 aaKnown RBP eCLIP10.15□□□□□ -0.79
SNCA-206ENST00000420646 SLC27A3Q5K4L6 730 aa10.15□□□□□ -0.79
SNCA-206ENST00000420646 AOPEPQ8N6M6 819 aa10.15□□□□□ -0.79
SNCA-206ENST00000420646 GPKOWQ92917 476 aaPredicted RBP eCLIP10.15□□□□□ -0.79
SNCA-206ENST00000420646 RTFDC1Q9BY42 306 aaPredicted RBP10.15□□□□□ -0.79
SNCA-206ENST00000420646 A0A1W2PQ27 194 aa10.14□□□□□ -0.79
SNCA-206ENST00000420646 A0A1W2PQ64 194 aa10.14□□□□□ -0.79
SNCA-206ENST00000420646 A0A1W2PQD8 194 aa10.14□□□□□ -0.79
SNCA-206ENST00000420646 FGRP09769 529 aa10.14□□□□□ -0.79
SNCA-206ENST00000420646 CMA1P23946 247 aa10.14□□□□□ -0.79
SNCA-206ENST00000420646 HSP90AA4PQ58FG1 418 aa10.14□□□□□ -0.79
SNCA-206ENST00000420646 SPTY2D1Q68D10 685 aaPredicted RBP10.14□□□□□ -0.79
SNCA-206ENST00000420646 CLEC10AQ8IUN9 316 aa10.14□□□□□ -0.79
SNCA-206ENST00000420646 DHX40Q8IX18 779 aaKnown RBP10.14□□□□□ -0.79
SNCA-206ENST00000420646 KIAA1468Q9P260 1216 aa10.14□□□□□ -0.79
SNCA-206ENST00000420646 MYH15Q9Y2K3 1946 aa10.14□□□□□ -0.79
SNCA-206ENST00000420646 SLC3A2P08195 630 aaKnown RBP10.14□□□□□ -0.79
SNCA-206ENST00000420646 PDE4BQ07343 736 aa10.14□□□□□ -0.79
SNCA-206ENST00000420646 HS1BP3Q53T59 392 aa10.14□□□□□ -0.79
SNCA-206ENST00000420646 CCDC186Q7Z3E2 898 aa10.14□□□□□ -0.79
SNCA-206ENST00000420646 FOXP4Q8IVH2 680 aaPredicted RBP10.14□□□□□ -0.79
SNCA-206ENST00000420646 RASGRP4Q8TDF6 673 aa10.14□□□□□ -0.79
SNCA-206ENST00000420646 PYCARDQ9ULZ3 195 aa10.14□□□□□ -0.79
SNCA-206ENST00000420646 PCDHAC2Q9Y5I4 1007 aa10.14□□□□□ -0.79
SNCA-206ENST00000420646 DUOX1Q9NRD9 1551 aa10.14□□□□□ -0.79
SNCA-206ENST00000420646 BECN2A8MW95 431 aa10.13□□□□□ -0.79
SNCA-206ENST00000420646 STX1AQ16623 288 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms