RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 RRP36Q96EU6 259 aaKnown RBP11.58□□□□□ -0.56
PRDM1-201ENST00000369089 MTRQ99707 1265 aa11.58□□□□□ -0.56
PRDM1-201ENST00000369089 FTOQ9C0B1 505 aaKnown RBP eCLIP11.58□□□□□ -0.56
PRDM1-201ENST00000369089 PER1O15534 1290 aaPredicted RBP11.58□□□□□ -0.56
PRDM1-201ENST00000369089 FBLN1P23142 703 aa11.58□□□□□ -0.56
PRDM1-201ENST00000369089 GGCXP38435 758 aa11.58□□□□□ -0.56
PRDM1-201ENST00000369089 SPAG1Q07617 926 aa11.58□□□□□ -0.56
PRDM1-201ENST00000369089 CCDC144BQ3MJ40 725 aa11.58□□□□□ -0.56
PRDM1-201ENST00000369089 TMTC1Q8IUR5 882 aa11.58□□□□□ -0.56
PRDM1-201ENST00000369089 CCDC144CPQ8IYA2 1237 aa11.58□□□□□ -0.56
PRDM1-201ENST00000369089 ATP6V0A1Q93050 837 aa11.58□□□□□ -0.56
PRDM1-201ENST00000369089 HIC2Q96JB3 615 aa11.58□□□□□ -0.56
PRDM1-201ENST00000369089 DDX21Q9NR30 783 aaKnown RBP eCLIP11.58□□□□□ -0.56
PRDM1-201ENST00000369089 TNRQ92752 1358 aa11.58□□□□□ -0.56
PRDM1-201ENST00000369089 EIF4E1BA6NMX2 242 aaKnown RBP11.58□□□□□ -0.56
PRDM1-201ENST00000369089 FOXO3O43524 673 aa11.58□□□□□ -0.56
PRDM1-201ENST00000369089 ZBTB16Q05516 673 aa11.58□□□□□ -0.56
PRDM1-201ENST00000369089 CEP70Q8NHQ1 597 aa11.58□□□□□ -0.56
PRDM1-201ENST00000369089 NEUROD6Q96NK8 337 aa11.58□□□□□ -0.56
PRDM1-201ENST00000369089 PRDM11Q9NQV5 511 aa11.58□□□□□ -0.56
PRDM1-201ENST00000369089 GNAT3A8MTJ3 354 aa11.57□□□□□ -0.56
PRDM1-201ENST00000369089 CNGA1P29973 690 aa11.57□□□□□ -0.56
PRDM1-201ENST00000369089 MTMR3Q13615 1198 aa11.57□□□□□ -0.56
PRDM1-201ENST00000369089 FOXR1Q6PIV2 292 aa11.57□□□□□ -0.56
PRDM1-201ENST00000369089 CROCCP2Q86T23 111 aa11.57□□□□□ -0.56
PRDM1-201ENST00000369089 OLFM3Q96PB7 478 aa11.57□□□□□ -0.56
PRDM1-201ENST00000369089 EXOC1Q9NV70 894 aa11.57□□□□□ -0.56
PRDM1-201ENST00000369089 AKAP2Q9Y2D5 859 aa11.57□□□□□ -0.56
PRDM1-201ENST00000369089 SOS1Q07889 1333 aaPredicted RBP11.57□□□□□ -0.56
PRDM1-201ENST00000369089 IQCB1Q15051 598 aa11.57□□□□□ -0.56
PRDM1-201ENST00000369089 THEMIS2Q5TEJ8 643 aa11.57□□□□□ -0.56
PRDM1-201ENST00000369089 NBPF14Q5TI25 921 aa11.57□□□□□ -0.56
PRDM1-201ENST00000369089 ARMC3Q5W041 872 aa11.57□□□□□ -0.56
PRDM1-201ENST00000369089 NUTM2AQ8IVF1 878 aaPredicted RBP11.57□□□□□ -0.56
PRDM1-201ENST00000369089 DESI2Q9BSY9 194 aa11.57□□□□□ -0.56
PRDM1-201ENST00000369089 FAM200BP0CF97 657 aa11.57□□□□□ -0.56
PRDM1-201ENST00000369089 DDR1Q08345 913 aa11.57□□□□□ -0.56
PRDM1-201ENST00000369089 VPS53Q5VIR6 699 aa11.57□□□□□ -0.56
PRDM1-201ENST00000369089 TOM1L2Q6ZVM7 507 aa11.57□□□□□ -0.56
PRDM1-201ENST00000369089 ZNF280CQ8ND82 737 aa11.57□□□□□ -0.56
PRDM1-201ENST00000369089 IQCDQ96DY2 449 aa11.57□□□□□ -0.56
PRDM1-201ENST00000369089 DNAI2Q9GZS0 605 aa11.57□□□□□ -0.56
PRDM1-201ENST00000369089 ECEL1O95672 775 aa11.57□□□□□ -0.56
PRDM1-201ENST00000369089 OATP04181 439 aa11.57□□□□□ -0.56
PRDM1-201ENST00000369089 ATP2A2P16615 1042 aaKnown RBP11.57□□□□□ -0.56
PRDM1-201ENST00000369089 DDIT3P35638 169 aa11.57□□□□□ -0.56
PRDM1-201ENST00000369089 EPHB4P54760 987 aa11.57□□□□□ -0.56
PRDM1-201ENST00000369089 SF3A3Q12874 501 aaKnown RBP eCLIP11.57□□□□□ -0.56
PRDM1-201ENST00000369089 FKBP15Q5T1M5 1219 aa11.57□□□□□ -0.56
PRDM1-201ENST00000369089 MYSM1Q5VVJ2 828 aa11.57□□□□□ -0.56
PRDM1-201ENST00000369089 ATL3Q6DD88 541 aa11.57□□□□□ -0.56
PRDM1-201ENST00000369089 NLRP14Q86W24 1093 aa11.57□□□□□ -0.56
PRDM1-201ENST00000369089 HNRNPLLQ8WVV9 542 aaKnown RBP11.57□□□□□ -0.56
PRDM1-201ENST00000369089 VIL1P09327 827 aaKnown RBP11.56□□□□□ -0.56
PRDM1-201ENST00000369089 IMPDH2P12268 514 aa11.56□□□□□ -0.56
PRDM1-201ENST00000369089 VPS41P49754 854 aa11.56□□□□□ -0.56
PRDM1-201ENST00000369089 CYP26C1Q6V0L0 522 aa11.56□□□□□ -0.56
PRDM1-201ENST00000369089 PPP1R21Q6ZMI0 780 aa11.56□□□□□ -0.56
PRDM1-201ENST00000369089 RUFY3Q7L099 469 aa11.56□□□□□ -0.56
PRDM1-201ENST00000369089 DDX54Q8TDD1 881 aaKnown RBP11.56□□□□□ -0.56
PRDM1-201ENST00000369089 VCPKMTQ9H867 229 aa11.56□□□□□ -0.56
PRDM1-201ENST00000369089 PALMDQ9NP74 551 aa11.56□□□□□ -0.56
PRDM1-201ENST00000369089 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.56□□□□□ -0.56
PRDM1-201ENST00000369089 MRPL12P52815 198 aaKnown RBP11.56□□□□□ -0.56
PRDM1-201ENST00000369089 CCT2P78371 535 aaKnown RBP11.56□□□□□ -0.56
PRDM1-201ENST00000369089 FAM133BQ5BKY9 247 aaKnown RBP11.56□□□□□ -0.56
PRDM1-201ENST00000369089 USP33Q8TEY7 942 aa11.56□□□□□ -0.56
PRDM1-201ENST00000369089 NOD2Q9HC29 1040 aa11.56□□□□□ -0.56
PRDM1-201ENST00000369089 KLHL14Q9P2G3 628 aa11.56□□□□□ -0.56
PRDM1-201ENST00000369089 INTUQ9ULD6 942 aa11.56□□□□□ -0.56
PRDM1-201ENST00000369089 ACEP12821 1306 aa11.56□□□□□ -0.56
PRDM1-201ENST00000369089 TXNDC9O14530 226 aa11.56□□□□□ -0.56
PRDM1-201ENST00000369089 CYP2E1P05181 493 aaPredicted RBP11.56□□□□□ -0.56
PRDM1-201ENST00000369089 KRT71Q3SY84 523 aa11.56□□□□□ -0.56
PRDM1-201ENST00000369089 CCDC13Q8IYE1 715 aa11.56□□□□□ -0.56
PRDM1-201ENST00000369089 FAM81BQ96LP2 452 aa11.56□□□□□ -0.56
PRDM1-201ENST00000369089 SPG7Q9UQ90 795 aa11.56□□□□□ -0.56
PRDM1-201ENST00000369089 UHRF1BP1LA0JNW5 1464 aa11.56□□□□□ -0.56
PRDM1-201ENST00000369089 GMNNO75496 209 aa11.56□□□□□ -0.56
PRDM1-201ENST00000369089 GUCY1B3Q02153 619 aa11.56□□□□□ -0.56
PRDM1-201ENST00000369089 PPARDQ03181 441 aa11.56□□□□□ -0.56
PRDM1-201ENST00000369089 TMTC2Q8N394 836 aa11.56□□□□□ -0.56
PRDM1-201ENST00000369089 C8orf76Q96K31 380 aa11.56□□□□□ -0.56
PRDM1-201ENST00000369089 PFDN4Q9NQP4 134 aa11.56□□□□□ -0.56
PRDM1-201ENST00000369089 ASXL1Q8IXJ9 1541 aa11.55□□□□□ -0.56
PRDM1-201ENST00000369089 AKR1B10O60218 316 aa11.55□□□□□ -0.56
PRDM1-201ENST00000369089 SUN1O94901 812 aa11.55□□□□□ -0.56
PRDM1-201ENST00000369089 CCND1P24385 295 aa11.55□□□□□ -0.56
PRDM1-201ENST00000369089 NLRP12P59046 1061 aa11.55□□□□□ -0.56
PRDM1-201ENST00000369089 KANK3Q6NY19 840 aa11.55□□□□□ -0.56
PRDM1-201ENST00000369089 UBAC1Q9BSL1 405 aa11.55□□□□□ -0.56
PRDM1-201ENST00000369089 BLMP54132 1417 aaPredicted RBP11.55□□□□□ -0.56
PRDM1-201ENST00000369089 A0A1W2PRG0 241 aa11.55□□□□□ -0.56
PRDM1-201ENST00000369089 HGSO14964 777 aaPredicted RBP11.55□□□□□ -0.56
PRDM1-201ENST00000369089 CUTAO60888 179 aa11.55□□□□□ -0.56
PRDM1-201ENST00000369089 SNX1Q13596 522 aa11.55□□□□□ -0.56
PRDM1-201ENST00000369089 KIAA0753Q2KHM9 967 aa11.55□□□□□ -0.56
PRDM1-201ENST00000369089 TMEM154Q6P9G4 183 aa11.55□□□□□ -0.56
PRDM1-201ENST00000369089 SNRNP27Q8WVK2 155 aaKnown RBP11.55□□□□□ -0.56
PRDM1-201ENST00000369089 CASP10Q92851 521 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms