RNA–Protein interactions for RNA: ENST00000286301.7

CSF1R-201, Transcript of colony stimulating factor 1 receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSF1R, Length 3,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-201ENST00000286301 USP17L4A6NCW7 530 aa10.69□□□□□ -0.7
CSF1R-201ENST00000286301 PLEKHA8P1O95397 391 aa10.69□□□□□ -0.7
CSF1R-201ENST00000286301 USP17L1Q7RTZ2 530 aa10.69□□□□□ -0.7
CSF1R-201ENST00000286301 AMIGO3Q86WK7 504 aa10.69□□□□□ -0.7
CSF1R-201ENST00000286301 KIAA0825Q8IV33 1275 aa10.69□□□□□ -0.7
CSF1R-201ENST00000286301 GPKOWQ92917 476 aaPredicted RBP eCLIP10.69□□□□□ -0.7
CSF1R-201ENST00000286301 ALDH8A1Q9H2A2 487 aaPredicted RBP10.69□□□□□ -0.7
CSF1R-201ENST00000286301 CPVLQ9H3G5 476 aa10.69□□□□□ -0.7
CSF1R-201ENST00000286301 TRMT1Q9NXH9 659 aaKnown RBP10.69□□□□□ -0.7
CSF1R-201ENST00000286301 HPS5Q9UPZ3 1129 aa10.69□□□□□ -0.7
CSF1R-201ENST00000286301 POLR2DO15514 142 aaKnown RBP10.69□□□□□ -0.7
CSF1R-201ENST00000286301 MMP10P09238 476 aa10.69□□□□□ -0.7
CSF1R-201ENST00000286301 PFKFB1P16118 471 aa10.69□□□□□ -0.7
CSF1R-201ENST00000286301 SLF2Q8IX21 1173 aa10.69□□□□□ -0.7
CSF1R-201ENST00000286301 SH3RF3Q8TEJ3 882 aaPredicted RBP10.69□□□□□ -0.7
CSF1R-201ENST00000286301 DBNDD1Q9H9R9 158 aa10.69□□□□□ -0.7
CSF1R-201ENST00000286301 RCOR1Q9UKL0 485 aa10.69□□□□□ -0.7
CSF1R-201ENST00000286301 TTF2Q9UNY4 1162 aaKnown RBP10.69□□□□□ -0.7
CSF1R-201ENST00000286301 MRVI1Q9Y6F6 885 aa10.69□□□□□ -0.7
CSF1R-201ENST00000286301 TCHHQ07283 1943 aa10.69□□□□□ -0.7
CSF1R-201ENST00000286301 KRT2P35908 639 aa10.69□□□□□ -0.7
CSF1R-201ENST00000286301 ADALQ6DHV7 355 aa10.69□□□□□ -0.7
CSF1R-201ENST00000286301 LINC00301Q8NCQ3 95 aa10.69□□□□□ -0.7
CSF1R-201ENST00000286301 IGDCC4Q8TDY8 1250 aa10.69□□□□□ -0.7
CSF1R-201ENST00000286301 NSUN4Q96CB9 384 aaKnown RBP10.69□□□□□ -0.7
CSF1R-201ENST00000286301 GOLPH3LQ9H4A5 285 aa10.69□□□□□ -0.7
CSF1R-201ENST00000286301 ELP1O95163 1332 aa10.69□□□□□ -0.7
CSF1R-201ENST00000286301 TXLNAP40222 546 aa10.68□□□□□ -0.7
CSF1R-201ENST00000286301 GPSM2P81274 684 aa10.68□□□□□ -0.7
CSF1R-201ENST00000286301 NOSTRINQ8IVI9 506 aa10.68□□□□□ -0.7
CSF1R-201ENST00000286301 FAM177A1Q8N128 213 aaPredicted RBP10.68□□□□□ -0.7
CSF1R-201ENST00000286301 KRI1Q8N9T8 703 aaKnown RBP10.68□□□□□ -0.7
CSF1R-201ENST00000286301 PDLIM2Q96JY6 352 aa10.68□□□□□ -0.7
CSF1R-201ENST00000286301 DCP1AQ9NPI6 582 aaPredicted RBP10.68□□□□□ -0.7
CSF1R-201ENST00000286301 LRRC4BQ9NT99 713 aa10.68□□□□□ -0.7
CSF1R-201ENST00000286301 CTR9Q6PD62 1173 aa10.68□□□□□ -0.7
CSF1R-201ENST00000286301 ENAHQ8N8S7 591 aaPredicted RBP10.68□□□□□ -0.7
CSF1R-201ENST00000286301 PARP4Q9UKK3 1724 aaKnown RBP10.68□□□□□ -0.7
CSF1R-201ENST00000286301 CNTNAP4Q9C0A0 1308 aa10.68□□□□□ -0.7
CSF1R-201ENST00000286301 TCRBV5S4A2TA0A5A2 114 aa10.68□□□□□ -0.7
CSF1R-201ENST00000286301 EVX2Q03828 476 aa10.68□□□□□ -0.7
CSF1R-201ENST00000286301 PNOCQ13519 176 aa10.68□□□□□ -0.7
CSF1R-201ENST00000286301 PNMA1Q8ND90 353 aa10.68□□□□□ -0.7
CSF1R-201ENST00000286301 RASGRP4Q8TDF6 673 aa10.68□□□□□ -0.7
CSF1R-201ENST00000286301 ZNF512BQ96KM6 892 aaPredicted RBP10.68□□□□□ -0.7
CSF1R-201ENST00000286301 KCNH3Q9ULD8 1083 aa10.68□□□□□ -0.7
CSF1R-201ENST00000286301 FOXP2O15409 715 aa10.67□□□□□ -0.7
CSF1R-201ENST00000286301 LIFRP42702 1097 aa10.67□□□□□ -0.7
CSF1R-201ENST00000286301 STX17P56962 302 aa10.67□□□□□ -0.7
CSF1R-201ENST00000286301 RC3H1Q5TC82 1133 aaKnown RBP10.67□□□□□ -0.7
CSF1R-201ENST00000286301 TMC6Q7Z403 805 aa10.67□□□□□ -0.7
CSF1R-201ENST00000286301 LEMD3Q9Y2U8 911 aa10.67□□□□□ -0.7
CSF1R-201ENST00000286301 SSBP05455 408 aaKnown RBP eCLIP10.67□□□□□ -0.7
CSF1R-201ENST00000286301 NAPAP54920 295 aa10.67□□□□□ -0.7
CSF1R-201ENST00000286301 PTPN21Q16825 1174 aa10.67□□□□□ -0.7
CSF1R-201ENST00000286301 ZNF827Q17R98 1081 aa10.67□□□□□ -0.7
CSF1R-201ENST00000286301 C11orf57Q6ZUT1 292 aaPredicted RBP10.67□□□□□ -0.7
CSF1R-201ENST00000286301 NKX2-3Q8TAU0 364 aa10.67□□□□□ -0.7
CSF1R-201ENST00000286301 OXER1Q8TDS5 423 aa10.67□□□□□ -0.7
CSF1R-201ENST00000286301 STAG1Q8WVM7 1258 aa10.67□□□□□ -0.7
CSF1R-201ENST00000286301 GPCPD1Q9NPB8 672 aa10.67□□□□□ -0.7
CSF1R-201ENST00000286301 RTEL1Q9NZ71 1219 aa10.67□□□□□ -0.7
CSF1R-201ENST00000286301 ARPP21Q9UBL0 812 aaPredicted RBP10.67□□□□□ -0.7
CSF1R-201ENST00000286301 SPATA31A6Q5VVP1 1343 aa10.67□□□□□ -0.7
CSF1R-201ENST00000286301 COL18A1P39060 1754 aa10.67□□□□□ -0.7
CSF1R-201ENST00000286301 PLEKHG2Q9H7P9 1386 aa10.67□□□□□ -0.7
CSF1R-201ENST00000286301 YEATS4O95619 227 aa10.67□□□□□ -0.7
CSF1R-201ENST00000286301 CACNB3P54284 484 aa10.67□□□□□ -0.7
CSF1R-201ENST00000286301 IRX5P78411 483 aaPredicted RBP10.67□□□□□ -0.7
CSF1R-201ENST00000286301 CCAR2Q8N163 923 aaKnown RBP10.67□□□□□ -0.7
CSF1R-201ENST00000286301 FNBP4Q8N3X1 1017 aaPredicted RBP10.67□□□□□ -0.7
CSF1R-201ENST00000286301 CD209Q9NNX6 404 aa10.67□□□□□ -0.7
CSF1R-201ENST00000286301 CALM1P0DP23 149 aa10.67□□□□□ -0.7
CSF1R-201ENST00000286301 CALM2P0DP24 149 aa10.67□□□□□ -0.7
CSF1R-201ENST00000286301 CALM3P0DP25 149 aa10.67□□□□□ -0.7
CSF1R-201ENST00000286301 IFNAR1P17181 557 aa10.67□□□□□ -0.7
CSF1R-201ENST00000286301 RILPL1Q5EBL4 403 aa10.67□□□□□ -0.7
CSF1R-201ENST00000286301 ATL3Q6DD88 541 aa10.67□□□□□ -0.7
CSF1R-201ENST00000286301 SMARCE1Q969G3 411 aa10.67□□□□□ -0.7
CSF1R-201ENST00000286301 EYA3Q99504 573 aa10.67□□□□□ -0.7
CSF1R-201ENST00000286301 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.67□□□□□ -0.7
CSF1R-201ENST00000286301 MXD3Q9BW11 206 aa10.67□□□□□ -0.7
CSF1R-201ENST00000286301 NBPF3Q9H094 633 aa10.67□□□□□ -0.7
CSF1R-201ENST00000286301 ATP8A2Q9NTI2 1148 aa10.67□□□□□ -0.7
CSF1R-201ENST00000286301 PPEF1O14829 653 aaPredicted RBP10.66□□□□□ -0.7
CSF1R-201ENST00000286301 ATP2B4P23634 1241 aa10.66□□□□□ -0.7
CSF1R-201ENST00000286301 UBA5Q9GZZ9 404 aa10.66□□□□□ -0.7
CSF1R-201ENST00000286301 LRRC47Q8N1G4 583 aaKnown RBP10.66□□□□□ -0.7
CSF1R-201ENST00000286301 PCMTD1Q96MG8 357 aaPredicted RBP10.66□□□□□ -0.7
CSF1R-201ENST00000286301 NRBP1Q9UHY1 535 aa10.66□□□□□ -0.7
CSF1R-201ENST00000286301 PCDHB6Q9Y5E3 794 aa10.66□□□□□ -0.7
CSF1R-201ENST00000286301 DISP2A7MBM2 1401 aa10.66□□□□□ -0.7
CSF1R-201ENST00000286301 FMNL1O95466 1100 aaPredicted RBP10.66□□□□□ -0.7
CSF1R-201ENST00000286301 CDC25AP30304 524 aa10.66□□□□□ -0.7
CSF1R-201ENST00000286301 LRMPQ12912 555 aa10.66□□□□□ -0.7
CSF1R-201ENST00000286301 ALX1Q15699 326 aa10.66□□□□□ -0.7
CSF1R-201ENST00000286301 GRAMD1CQ8IYS0 662 aa10.66□□□□□ -0.7
CSF1R-201ENST00000286301 CPLX3Q8WVH0 158 aa10.66□□□□□ -0.7
CSF1R-201ENST00000286301 IFNKQ9P0W0 207 aa10.66□□□□□ -0.7
CSF1R-201ENST00000286301 STRCQ7RTU9 1775 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms