RNA–Protein interactions for RNA: ENSMUST00000214204.1

Chrna3-202, Transcript of Neuronal acetylcholine receptor subunit alpha-3, mousemouse

TSL 1 (best) BASIC

Gene Chrna3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3-202ENSMUST00000214204 Shtn1Q8K2Q9 631 aa17.07■□□□□ 0.32
Chrna3-202ENSMUST00000214204 Usp5P56399 858 aaKnown RBP17.06■□□□□ 0.32
Chrna3-202ENSMUST00000214204 Npr3P70180 536 aa17.06■□□□□ 0.32
Chrna3-202ENSMUST00000214204 Traf3ip1Q149C2 625 aa17.06■□□□□ 0.32
Chrna3-202ENSMUST00000214204 Tmed8Q3UHI4 326 aa17.06■□□□□ 0.32
Chrna3-202ENSMUST00000214204 LrmpQ60664 539 aa17.06■□□□□ 0.32
Chrna3-202ENSMUST00000214204 Triml1Q8BVP1 470 aa17.06■□□□□ 0.32
Chrna3-202ENSMUST00000214204 Tmx3Q8BXZ1 456 aa17.06■□□□□ 0.32
Chrna3-202ENSMUST00000214204 Cdc45Q9Z1X9 566 aa17.06■□□□□ 0.32
Chrna3-202ENSMUST00000214204 Kcnq2Q9Z351 759 aa17.06■□□□□ 0.32
Chrna3-202ENSMUST00000214204 CnpP16330 420 aa17.06■□□□□ 0.32
Chrna3-202ENSMUST00000214204 Lins1Q3U1D0 764 aa17.06■□□□□ 0.32
Chrna3-202ENSMUST00000214204 Tbc1d9bQ5SVR0 1263 aa17.06■□□□□ 0.32
Chrna3-202ENSMUST00000214204 Tor1aip2Q8BYU6 502 aa17.06■□□□□ 0.32
Chrna3-202ENSMUST00000214204 Akap8Q9DBR0 687 aaKnown RBP17.06■□□□□ 0.32
Chrna3-202ENSMUST00000214204 Ppef2O35385 757 aa17.05■□□□□ 0.32
Chrna3-202ENSMUST00000214204 ImpactO55091 318 aa17.05■□□□□ 0.32
Chrna3-202ENSMUST00000214204 Scg2Q03517 617 aa17.05■□□□□ 0.32
Chrna3-202ENSMUST00000214204 Usp28Q5I043 1051 aa17.05■□□□□ 0.32
Chrna3-202ENSMUST00000214204 Lamc2Q61092 1191 aa17.05■□□□□ 0.32
Chrna3-202ENSMUST00000214204 Mknk2Q8CDB0 459 aa17.05■□□□□ 0.32
Chrna3-202ENSMUST00000214204 Tfcp2Q9ERA0 502 aa17.05■□□□□ 0.32
Chrna3-202ENSMUST00000214204 Vil1Q62468 827 aa17.05■□□□□ 0.32
Chrna3-202ENSMUST00000214204 Tmc4Q7TQ65 694 aa17.05■□□□□ 0.32
Chrna3-202ENSMUST00000214204 Gjd4Q8BSD4 364 aa17.05■□□□□ 0.32
Chrna3-202ENSMUST00000214204 Borcs6Q9D6W8 360 aa17.05■□□□□ 0.32
Chrna3-202ENSMUST00000214204 Tjap1Q9DCD5 539 aa17.05■□□□□ 0.32
Chrna3-202ENSMUST00000214204 Ndufa8Q9DCJ5 172 aa17.05■□□□□ 0.32
Chrna3-202ENSMUST00000214204 Zscan18E9PUD6 809 aa17.04■□□□□ 0.32
Chrna3-202ENSMUST00000214204 Psmd1Q3TXS7 953 aa17.04■□□□□ 0.32
Chrna3-202ENSMUST00000214204 Ncbp1Q3UYV9 790 aaKnown RBP17.04■□□□□ 0.32
Chrna3-202ENSMUST00000214204 Eme2Q56A04 373 aa17.04■□□□□ 0.32
Chrna3-202ENSMUST00000214204 MycbpapQ5SUV2 932 aa17.04■□□□□ 0.32
Chrna3-202ENSMUST00000214204 Dpf2Q61103 391 aaKnown RBP17.04■□□□□ 0.32
Chrna3-202ENSMUST00000214204 Samm50Q8BGH2 469 aa17.04■□□□□ 0.32
Chrna3-202ENSMUST00000214204 Trmt112Q9DCG9 125 aa17.04■□□□□ 0.32
Chrna3-202ENSMUST00000214204 Rcan1Q9JHG6 198 aa17.04■□□□□ 0.32
Chrna3-202ENSMUST00000214204 Igbp1bQ9QZ29 343 aa17.04■□□□□ 0.32
Chrna3-202ENSMUST00000214204 Bcorl1A2AQH4 1781 aa17.03■□□□□ 0.32
Chrna3-202ENSMUST00000214204 Gxylt1Q3UHH8 404 aa17.03■□□□□ 0.32
Chrna3-202ENSMUST00000214204 Tigd5Q499M4 642 aa17.03■□□□□ 0.32
Chrna3-202ENSMUST00000214204 Prkag3Q8BGM7 489 aa17.03■□□□□ 0.32
Chrna3-202ENSMUST00000214204 Wdr24Q8CFJ9 790 aa17.03■□□□□ 0.32
Chrna3-202ENSMUST00000214204 Tob2Q9JM55 345 aa17.03■□□□□ 0.32
Chrna3-202ENSMUST00000214204 Clic4Q9QYB1 253 aa17.03■□□□□ 0.32
Chrna3-202ENSMUST00000214204 Igsf9bE9PZ19 1328 aa17.03■□□□□ 0.32
Chrna3-202ENSMUST00000214204 Atp8b3Q6UQ17 1335 aa17.02■□□□□ 0.32
Chrna3-202ENSMUST00000214204 Zscan20B2KFW1 1030 aa17.02■□□□□ 0.32
Chrna3-202ENSMUST00000214204 En2P09066 324 aa17.02■□□□□ 0.32
Chrna3-202ENSMUST00000214204 Glra4Q61603 456 aa17.02■□□□□ 0.32
Chrna3-202ENSMUST00000214204 Scaf8Q6DID3 1268 aa17.02■□□□□ 0.32
Chrna3-202ENSMUST00000214204 R3hcc1Q8BSI6 488 aa17.02■□□□□ 0.32
Chrna3-202ENSMUST00000214204 Krt85Q9Z2T6 507 aa17.02■□□□□ 0.32
Chrna3-202ENSMUST00000214204 Tbc1d8bA3KGB4 1114 aa17.02■□□□□ 0.32
Chrna3-202ENSMUST00000214204 Clrn2B2RVW2 232 aa17.02■□□□□ 0.32
Chrna3-202ENSMUST00000214204 Sema3fO88632 785 aa17.02■□□□□ 0.32
Chrna3-202ENSMUST00000214204 Calm1P0DP26 149 aaKnown RBP17.02■□□□□ 0.32
Chrna3-202ENSMUST00000214204 Calm2P0DP27 149 aaKnown RBP17.02■□□□□ 0.32
Chrna3-202ENSMUST00000214204 Calm3P0DP28 149 aaKnown RBP17.02■□□□□ 0.32
Chrna3-202ENSMUST00000214204 Tmtc2Q56A06 836 aa17.02■□□□□ 0.32
Chrna3-202ENSMUST00000214204 Pip5kl1Q6U7H8 395 aa17.02■□□□□ 0.32
Chrna3-202ENSMUST00000214204 Kif1bpQ6ZPU9 617 aa17.02■□□□□ 0.32
Chrna3-202ENSMUST00000214204 Ndufb9Q9CQJ8 179 aa17.02■□□□□ 0.32
Chrna3-202ENSMUST00000214204 Glrx3Q9CQM9 337 aa17.02■□□□□ 0.32
Chrna3-202ENSMUST00000214204 Gpaa1Q9WTK3 621 aa17.02■□□□□ 0.32
Chrna3-202ENSMUST00000214204 Ccng2O08918 344 aa17.01■□□□□ 0.31
Chrna3-202ENSMUST00000214204 Ube2hP62257 183 aa17.01■□□□□ 0.31
Chrna3-202ENSMUST00000214204 Map9Q3TRR0 646 aa17.01■□□□□ 0.31
Chrna3-202ENSMUST00000214204 Klrg2Q3UM83 387 aa17.01■□□□□ 0.31
Chrna3-202ENSMUST00000214204 Larp6Q8BN59 492 aa17.01■□□□□ 0.31
Chrna3-202ENSMUST00000214204 Nup88Q8CEC0 753 aaKnown RBP17.01■□□□□ 0.31
Chrna3-202ENSMUST00000214204 Mtmr4Q91XS1 1190 aa17.01■□□□□ 0.31
Chrna3-202ENSMUST00000214204 Mrps5Q99N87 432 aaKnown RBP17.01■□□□□ 0.31
Chrna3-202ENSMUST00000214204 A0A1W2P6Q8 802 aa17.01■□□□□ 0.31
Chrna3-202ENSMUST00000214204 Gm9048A0A1W2P7H4 802 aa17.01■□□□□ 0.31
Chrna3-202ENSMUST00000214204 A0A1W2P7Z8 802 aa17.01■□□□□ 0.31
Chrna3-202ENSMUST00000214204 Gm9046A0A1W2P855 802 aa17.01■□□□□ 0.31
Chrna3-202ENSMUST00000214204 Cplx1P63040 134 aa17.01■□□□□ 0.31
Chrna3-202ENSMUST00000214204 Fam89aQ14BJ1 175 aa17.01■□□□□ 0.31
Chrna3-202ENSMUST00000214204 Slc27a1Q60714 646 aa17.01■□□□□ 0.31
Chrna3-202ENSMUST00000214204 Stac3Q8BZ71 360 aa17.01■□□□□ 0.31
Chrna3-202ENSMUST00000214204 Hdac9Q99N13 588 aa17.01■□□□□ 0.31
Chrna3-202ENSMUST00000214204 Col1a1P11087 1453 aa17.01■□□□□ 0.31
Chrna3-202ENSMUST00000214204 Syce3B5KM66 88 aa17■□□□□ 0.31
Chrna3-202ENSMUST00000214204 Nfil3O08750 462 aa17■□□□□ 0.31
Chrna3-202ENSMUST00000214204 Epha2Q03145 977 aa17■□□□□ 0.31
Chrna3-202ENSMUST00000214204 Myo19Q5SV80 963 aa17■□□□□ 0.31
Chrna3-202ENSMUST00000214204 Tmem39bQ810L4 492 aa17■□□□□ 0.31
Chrna3-202ENSMUST00000214204 CrebrfQ8CDG5 640 aaKnown RBP17■□□□□ 0.31
Chrna3-202ENSMUST00000214204 NynrinQ5DTZ0 1840 aa17■□□□□ 0.31
Chrna3-202ENSMUST00000214204 Glt1d1A4FUP9 346 aa17■□□□□ 0.31
Chrna3-202ENSMUST00000214204 D830030K20RikE9PYQ5 218 aa17■□□□□ 0.31
Chrna3-202ENSMUST00000214204 Gm3043K7N693 218 aa17■□□□□ 0.31
Chrna3-202ENSMUST00000214204 Gm16440K7N6G6 218 aa17■□□□□ 0.31
Chrna3-202ENSMUST00000214204 Gm2244L7N2A3 218 aa17■□□□□ 0.31
Chrna3-202ENSMUST00000214204 Gm3278L7N2D2 218 aa17■□□□□ 0.31
Chrna3-202ENSMUST00000214204 Gm8271L7N2E2 218 aa17■□□□□ 0.31
Chrna3-202ENSMUST00000214204 Wnt10bP48614 389 aa17■□□□□ 0.31
Chrna3-202ENSMUST00000214204 Pcmtd1P59913 357 aa17■□□□□ 0.31
Chrna3-202ENSMUST00000214204 4933416C03RikQ3V063 378 aa17■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 28.4 ms