RNA–Protein interactions for RNA: ENSMUST00000214095.1

Ubp1-204, Transcript of Upstream-binding protein 1, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ubp1, Length 2,320 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-204ENSMUST00000214095 Gm28374F6SG70 93 aa13.55□□□□□ -0.24
Ubp1-204ENSMUST00000214095 Phxr4P15974 95 aa13.55□□□□□ -0.24
Ubp1-204ENSMUST00000214095 Gm9918Q8BUR5 174 aa13.54□□□□□ -0.24
Ubp1-204ENSMUST00000214095 Bean1Q9EQG5 255 aa13.53□□□□□ -0.24
Ubp1-204ENSMUST00000214095 Gm10160F6Y577 67 aa13.52□□□□□ -0.24
Ubp1-204ENSMUST00000214095 1600014C23RikQ9DAX4 101 aa13.52□□□□□ -0.25
Ubp1-204ENSMUST00000214095 Gm16253D3Z167 63 aa13.5□□□□□ -0.25
Ubp1-204ENSMUST00000214095 Defb39Q70KL3 74 aa13.47□□□□□ -0.25
Ubp1-204ENSMUST00000214095 Defb38Q7TNV7 63 aa13.46□□□□□ -0.26
Ubp1-204ENSMUST00000214095 Dnah7cA0A087WR13 4024 aa13.45□□□□□ -0.26
Ubp1-204ENSMUST00000214095 Tnp2P11378 117 aa13.44□□□□□ -0.26
Ubp1-204ENSMUST00000214095 Gpr15lA0A0B4J1N3 78 aa13.43□□□□□ -0.26
Ubp1-204ENSMUST00000214095 Ccdc179J3QM76 67 aa13.43□□□□□ -0.26
Ubp1-204ENSMUST00000214095 Dnah5Q8VHE6 4621 aa13.42□□□□□ -0.26
Ubp1-204ENSMUST00000214095 Sox16Q62247 57 aa13.39□□□□□ -0.27
Ubp1-204ENSMUST00000214095 Krtap14O08640 167 aa13.39□□□□□ -0.27
Ubp1-204ENSMUST00000214095 2310050C09RikG5E8Z3 280 aa13.38□□□□□ -0.27
Ubp1-204ENSMUST00000214095 4933415A04RikQ9D443 101 aa13.38□□□□□ -0.27
Ubp1-204ENSMUST00000214095 Ly6g6cQ9Z1Q4 126 aa13.34□□□□□ -0.27
Ubp1-204ENSMUST00000214095 Hectd4E9Q2E4 4418 aa13.33□□□□□ -0.28
Ubp1-204ENSMUST00000214095 Gm20661K7N787 53 aa13.28□□□□□ -0.28
Ubp1-204ENSMUST00000214095 Dnah7aE9Q0T8 4024 aa13.27□□□□□ -0.29
Ubp1-204ENSMUST00000214095 Defb11Q8R2I7 77 aa13.24□□□□□ -0.29
Ubp1-204ENSMUST00000214095 Defb13Q8R2I4 64 aa13.24□□□□□ -0.29
Ubp1-204ENSMUST00000214095 Krtap10-4Q08EG8 221 aa13.23□□□□□ -0.29
Ubp1-204ENSMUST00000214095 Dnah2P0C6F1 4456 aa13.21□□□□□ -0.29
Ubp1-204ENSMUST00000214095 Cypt15B1AXS0 87 aa13.19□□□□□ -0.3
Ubp1-204ENSMUST00000214095 Gm21798J3QNU5 87 aa13.17□□□□□ -0.3
Ubp1-204ENSMUST00000214095 Vps13dB1ART2 4390 aa13.17□□□□□ -0.3
Ubp1-204ENSMUST00000214095 Gm10643Q3URG9 111 aa13.17□□□□□ -0.3
Ubp1-204ENSMUST00000214095 Spaca4Q80ZQ0 127 aa13.16□□□□□ -0.3
Ubp1-204ENSMUST00000214095 Pkd1O08852 4293 aa13.12□□□□□ -0.31
Ubp1-204ENSMUST00000214095 SptssbQ925E8 76 aa13.12□□□□□ -0.31
Ubp1-204ENSMUST00000214095 Stard9Q80TF6 4561 aa13.1□□□□□ -0.31
Ubp1-204ENSMUST00000214095 ApobE9Q414 4505 aa13.1□□□□□ -0.31
Ubp1-204ENSMUST00000214095 Ndufb1P0DN34 57 aa13.09□□□□□ -0.31
Ubp1-204ENSMUST00000214095 Krtap13O88375 197 aa13.07□□□□□ -0.32
Ubp1-204ENSMUST00000214095 FcgbpE9Q0B5 2583 aa13.04□□□□□ -0.32
Ubp1-204ENSMUST00000214095 Wfdc3Q14AE4 130 aa13.02□□□□□ -0.33
Ubp1-204ENSMUST00000214095 Lrp1bQ9JI18 4599 aa12.99□□□□□ -0.33
Ubp1-204ENSMUST00000214095 Limd2Q8BGB5 128 aa12.93□□□□□ -0.34
Ubp1-204ENSMUST00000214095 Gm10999F6Q4M4 69 aa12.92□□□□□ -0.34
Ubp1-204ENSMUST00000214095 Uqcr11Q9CPX8 56 aa12.91□□□□□ -0.34
Ubp1-204ENSMUST00000214095 Krtap10-10A0A1W2P7T6 217 aa12.85□□□□□ -0.35
Ubp1-204ENSMUST00000214095 Gm3646F6S692 53 aa12.83□□□□□ -0.36
Ubp1-204ENSMUST00000214095 Pkhd1E9PZ36 4059 aa12.82□□□□□ -0.36
Ubp1-204ENSMUST00000214095 Q8BGJ3 129 aa12.81□□□□□ -0.36
Ubp1-204ENSMUST00000214095 2310034C09RikQ9D746 214 aa12.79□□□□□ -0.36
Ubp1-204ENSMUST00000214095 Gm2696A0A1W2P709 240 aa12.78□□□□□ -0.36
Ubp1-204ENSMUST00000214095 2310079G19RikQ9D6L6 185 aa12.7□□□□□ -0.38
Ubp1-204ENSMUST00000214095 Krtap3-2Q9D638 99 aa12.68□□□□□ -0.38
Ubp1-204ENSMUST00000214095 Krtap3-3Q9D7P0 99 aa12.68□□□□□ -0.38
Ubp1-204ENSMUST00000214095 Gm26620Q9CY65 116 aa12.66□□□□□ -0.38
Ubp1-204ENSMUST00000214095 9230102O04RikA2ASX7 82 aa12.65□□□□□ -0.39
Ubp1-204ENSMUST00000214095 Defb1P56386 69 aa12.65□□□□□ -0.39
Ubp1-204ENSMUST00000214095 Fat2Q5F226 4351 aa12.63□□□□□ -0.39
Ubp1-204ENSMUST00000214095 SacsQ9JLC8 4582 aa12.61□□□□□ -0.39
Ubp1-204ENSMUST00000214095 1700042G07RikB1AUF7 90 aa12.61□□□□□ -0.39
Ubp1-204ENSMUST00000214095 OxtP35454 125 aa12.61□□□□□ -0.39
Ubp1-204ENSMUST00000214095 Fat1A0A1L1SQU7 4645 aa12.58□□□□□ -0.39
Ubp1-204ENSMUST00000214095 A930033H14RikG5E8X6 103 aa12.58□□□□□ -0.4
Ubp1-204ENSMUST00000214095 4930507D05RikQ8C9C9 103 aa12.55□□□□□ -0.4
Ubp1-204ENSMUST00000214095 Sec61gP60060 68 aa12.54□□□□□ -0.4
Ubp1-204ENSMUST00000214095 Ndufs5Q99LY9 106 aa12.53□□□□□ -0.4
Ubp1-204ENSMUST00000214095 Dync1h1Q9JHU4 4644 aaKnown RBP12.53□□□□□ -0.4
Ubp1-204ENSMUST00000214095 Gm4491E0CX42 125 aa12.48□□□□□ -0.41
Ubp1-204ENSMUST00000214095 RetnlbQ99P86 105 aa12.48□□□□□ -0.41
Ubp1-204ENSMUST00000214095 Rps29P62274 56 aa12.46□□□□□ -0.41
Ubp1-204ENSMUST00000214095 D6Ertd527eA0A0N4SWI3 464 aa12.44□□□□□ -0.42
Ubp1-204ENSMUST00000214095 Gm11939A2A592 99 aa12.39□□□□□ -0.43
Ubp1-204ENSMUST00000214095 Vps13bQ80TY5 3993 aa12.23□□□□□ -0.45
Ubp1-204ENSMUST00000214095 Ryr3A2AGL3 4863 aa12.22□□□□□ -0.45
Ubp1-204ENSMUST00000214095 Pkhd1l1Q80ZA4 4249 aa12.19□□□□□ -0.46
Ubp1-204ENSMUST00000214095 Gm9821Q8K076 103 aa12.09□□□□□ -0.47
Ubp1-204ENSMUST00000214095 Cox6b2Q80ZN9 88 aa12.07□□□□□ -0.48
Ubp1-204ENSMUST00000214095 Lrp1Q91ZX7 4545 aaKnown RBP12.06□□□□□ -0.48
Ubp1-204ENSMUST00000214095 Gm5767A0A0J9YTU8 78 aa12.04□□□□□ -0.48
Ubp1-204ENSMUST00000214095 Pla2g10Q9QXX3 151 aa12.04□□□□□ -0.48
Ubp1-204ENSMUST00000214095 Gm20537G3UYK7 97 aa11.92□□□□□ -0.5
Ubp1-204ENSMUST00000214095 Kmt2cQ8BRH4 4903 aa11.9□□□□□ -0.5
Ubp1-204ENSMUST00000214095 Krtap19-5O08632 62 aa11.87□□□□□ -0.51
Ubp1-204ENSMUST00000214095 Ryr2E9Q401 4966 aaKnown RBP11.84□□□□□ -0.51
Ubp1-204ENSMUST00000214095 Gm9736A0A1W2P7N1 277 aa11.81□□□□□ -0.52
Ubp1-204ENSMUST00000214095 Fat3Q8BNA6 4555 aa11.79□□□□□ -0.52
Ubp1-204ENSMUST00000214095 Gm3880A0A1B0GSB3 72 aa11.79□□□□□ -0.52
Ubp1-204ENSMUST00000214095 Rnase13Q5GAM7 153 aa11.76□□□□□ -0.53
Ubp1-204ENSMUST00000214095 Krtap15-1Q9QZU5 150 aa11.71□□□□□ -0.53
Ubp1-204ENSMUST00000214095 Gm5965D3Z724 196 aa11.7□□□□□ -0.54
Ubp1-204ENSMUST00000214095 Rpl37Q9D823 97 aa11.69□□□□□ -0.54
Ubp1-204ENSMUST00000214095 Gm9955Q8CEJ8 102 aa11.68□□□□□ -0.54
Ubp1-204ENSMUST00000214095 Gm17606F6ZL36 78 aa11.66□□□□□ -0.54
Ubp1-204ENSMUST00000214095 Gm10382Q3V0T5 144 aa11.66□□□□□ -0.54
Ubp1-204ENSMUST00000214095 Mycbp2Q7TPH6 4711 aa11.66□□□□□ -0.54
Ubp1-204ENSMUST00000214095 Abca13Q5SSE9 5034 aa11.56□□□□□ -0.56
Ubp1-204ENSMUST00000214095 Dnah8Q91XQ0 4731 aa11.55□□□□□ -0.56
Ubp1-204ENSMUST00000214095 Ryr1E9PZQ0 5035 aa11.51□□□□□ -0.57
Ubp1-204ENSMUST00000214095 Gm17416Q30KP4 66 aa11.48□□□□□ -0.57
Ubp1-204ENSMUST00000214095 Krtap3-1A2A591 98 aa11.41□□□□□ -0.58
Ubp1-204ENSMUST00000214095 Gm12216A0A1W2P827 62 aa11.4□□□□□ -0.58
Ubp1-204ENSMUST00000214095 CriptO70333 101 aa11.27□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 7.7 ms