RNA–Protein interactions for RNA: ENSMUST00000170957.2

Ggps1-201, Transcript of Geranylgeranyl pyrophosphate synthase, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ggps1, Length 4,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ggps1-201ENSMUST00000170957 Q8BGJ3 129 aa5.66□□□□□ -1.5
Ggps1-201ENSMUST00000170957 Gm9918Q8BUR5 174 aa5.66□□□□□ -1.5
Ggps1-201ENSMUST00000170957 Cystm1Q8K353 104 aa5.65□□□□□ -1.51
Ggps1-201ENSMUST00000170957 Gm10197F6QEY5 67 aa5.63□□□□□ -1.51
Ggps1-201ENSMUST00000170957 Spint4Q9D263 159 aa5.62□□□□□ -1.51
Ggps1-201ENSMUST00000170957 Tnp2P11378 117 aa5.62□□□□□ -1.51
Ggps1-201ENSMUST00000170957 Prr13Q9CQJ5 137 aa5.62□□□□□ -1.51
Ggps1-201ENSMUST00000170957 Coa5Q99M07 74 aa5.62□□□□□ -1.51
Ggps1-201ENSMUST00000170957 Rps28P62858 69 aaKnown RBP5.6□□□□□ -1.51
Ggps1-201ENSMUST00000170957 Gm37013Q8K491 104 aa5.6□□□□□ -1.51
Ggps1-201ENSMUST00000170957 9230102O04RikA2ASX7 82 aa5.59□□□□□ -1.51
Ggps1-201ENSMUST00000170957 Defb1P56386 69 aa5.59□□□□□ -1.51
Ggps1-201ENSMUST00000170957 Gm17606F6ZL36 78 aa5.58□□□□□ -1.52
Ggps1-201ENSMUST00000170957 Cdc42se1Q8BHL7 80 aa5.58□□□□□ -1.52
Ggps1-201ENSMUST00000170957 Chtf8P0CG14 533 aa5.57□□□□□ -1.52
Ggps1-201ENSMUST00000170957 Ndufs5Q99LY9 106 aa5.56□□□□□ -1.52
Ggps1-201ENSMUST00000170957 Limd2Q8BGB5 128 aa5.55□□□□□ -1.52
Ggps1-201ENSMUST00000170957 Csmd3Q80T79 3707 aa5.54□□□□□ -1.52
Ggps1-201ENSMUST00000170957 Gm20661K7N787 53 aa5.54□□□□□ -1.52
Ggps1-201ENSMUST00000170957 Rnase13Q5GAM7 153 aa5.53□□□□□ -1.52
Ggps1-201ENSMUST00000170957 A530084C06RikQ3UTW2 186 aa5.53□□□□□ -1.52
Ggps1-201ENSMUST00000170957 Gm9821Q8K076 103 aa5.53□□□□□ -1.52
Ggps1-201ENSMUST00000170957 Gm10337F7DEP7 55 aa5.51□□□□□ -1.53
Ggps1-201ENSMUST00000170957 H2al1kJ3QP08 105 aa5.5□□□□□ -1.53
Ggps1-201ENSMUST00000170957 Gm10643Q3URG9 111 aa5.49□□□□□ -1.53
Ggps1-201ENSMUST00000170957 2310034C09RikQ9D746 214 aa5.49□□□□□ -1.53
Ggps1-201ENSMUST00000170957 Huwe1Q7TMY8 4377 aaKnown RBP5.48□□□□□ -1.53
Ggps1-201ENSMUST00000170957 Phxr4P15974 95 aa5.48□□□□□ -1.53
Ggps1-201ENSMUST00000170957 Krtap15-1Q9QZU5 150 aa5.47□□□□□ -1.53
Ggps1-201ENSMUST00000170957 Rps29P62274 56 aa5.46□□□□□ -1.54
Ggps1-201ENSMUST00000170957 Gm4491E0CX42 125 aa5.43□□□□□ -1.54
Ggps1-201ENSMUST00000170957 Gm5767A0A0J9YTU8 78 aa5.43□□□□□ -1.54
Ggps1-201ENSMUST00000170957 Uqcr11Q9CPX8 56 aa5.43□□□□□ -1.54
Ggps1-201ENSMUST00000170957 Dnah7bL7N1Y0 4068 aa5.41□□□□□ -1.54
Ggps1-201ENSMUST00000170957 Gm2310J3QNJ2 377 aa5.41□□□□□ -1.54
Ggps1-201ENSMUST00000170957 TnxbO35452 4006 aa5.41□□□□□ -1.54
Ggps1-201ENSMUST00000170957 H2al1mQ9DAD9 105 aa5.4□□□□□ -1.55
Ggps1-201ENSMUST00000170957 Gm21798J3QNU5 87 aa5.38□□□□□ -1.55
Ggps1-201ENSMUST00000170957 A0A1Y7VLE6 161 aa5.35□□□□□ -1.55
Ggps1-201ENSMUST00000170957 PlecQ9QXS1 4691 aaKnown RBP5.34□□□□□ -1.55
Ggps1-201ENSMUST00000170957 Gm9736A0A1W2P7N1 277 aa5.34□□□□□ -1.55
Ggps1-201ENSMUST00000170957 Gm5965D3Z724 196 aa5.33□□□□□ -1.56
Ggps1-201ENSMUST00000170957 Sec61bQ9CQS8 96 aaKnown RBP5.33□□□□□ -1.56
Ggps1-201ENSMUST00000170957 Dnah6E9Q0B6 4144 aa5.3□□□□□ -1.56
Ggps1-201ENSMUST00000170957 Dnah17Q69Z23 4481 aa5.28□□□□□ -1.56
Ggps1-201ENSMUST00000170957 PrkdcP97313 4128 aa5.27□□□□□ -1.57
Ggps1-201ENSMUST00000170957 Ryr1E9PZQ0 5035 aa5.27□□□□□ -1.57
Ggps1-201ENSMUST00000170957 D6Ertd527eA0A0N4SWI3 464 aa5.25□□□□□ -1.57
Ggps1-201ENSMUST00000170957 SvipQ3UZP4 77 aa5.25□□□□□ -1.57
Ggps1-201ENSMUST00000170957 Kmt2aP55200 3966 aa5.24□□□□□ -1.57
Ggps1-201ENSMUST00000170957 Dnah11E9Q7N9 4488 aa5.24□□□□□ -1.57
Ggps1-201ENSMUST00000170957 Ryr3A2AGL3 4863 aa5.24□□□□□ -1.57
Ggps1-201ENSMUST00000170957 Fam229aB2KGE5 128 aa5.23□□□□□ -1.57
Ggps1-201ENSMUST00000170957 Dnah9B1AR51 4484 aa5.23□□□□□ -1.57
Ggps1-201ENSMUST00000170957 Gm12216A0A1W2P827 62 aa5.22□□□□□ -1.57
Ggps1-201ENSMUST00000170957 Fras1Q80T14 4010 aa5.21□□□□□ -1.58
Ggps1-201ENSMUST00000170957 Dnah5Q8VHE6 4621 aa5.21□□□□□ -1.58
Ggps1-201ENSMUST00000170957 Rpl37Q9D823 97 aa5.19□□□□□ -1.58
Ggps1-201ENSMUST00000170957 2310057N15RikQ9D6T8 200 aa5.18□□□□□ -1.58
Ggps1-201ENSMUST00000170957 Krtap19-5O08632 62 aa5.18□□□□□ -1.58
Ggps1-201ENSMUST00000170957 Gm9955Q8CEJ8 102 aa5.16□□□□□ -1.58
Ggps1-201ENSMUST00000170957 Vps13dB1ART2 4390 aa5.15□□□□□ -1.58
Ggps1-201ENSMUST00000170957 Stard9Q80TF6 4561 aa5.14□□□□□ -1.59
Ggps1-201ENSMUST00000170957 SmcpP15265 143 aa5.11□□□□□ -1.59
Ggps1-201ENSMUST00000170957 Dnah3Q8BW94 4083 aa5.1□□□□□ -1.59
Ggps1-201ENSMUST00000170957 Spink7Q6IE32 76 aa5.07□□□□□ -1.6
Ggps1-201ENSMUST00000170957 Dync2h1Q45VK7 4306 aa5.06□□□□□ -1.6
Ggps1-201ENSMUST00000170957 Cox6b2Q80ZN9 88 aa5.06□□□□□ -1.6
Ggps1-201ENSMUST00000170957 Dnah1E9Q8T7 4250 aa5.04□□□□□ -1.6
Ggps1-201ENSMUST00000170957 BC029722A0A0N4SW31 51 aa5.03□□□□□ -1.6
Ggps1-201ENSMUST00000170957 Lrp1bQ9JI18 4599 aa5.01□□□□□ -1.61
Ggps1-201ENSMUST00000170957 A930033H14RikG5E8X6 103 aa5□□□□□ -1.61
Ggps1-201ENSMUST00000170957 ApobE9Q414 4505 aa5□□□□□ -1.61
Ggps1-201ENSMUST00000170957 Gm3880A0A1B0GSB3 72 aa4.99□□□□□ -1.61
Ggps1-201ENSMUST00000170957 Dync1h1Q9JHU4 4644 aaKnown RBP4.99□□□□□ -1.61
Ggps1-201ENSMUST00000170957 Gm19426M0QWC7 77 aa4.99□□□□□ -1.61
Ggps1-201ENSMUST00000170957 Gm10318A0A1W2P728 225 aa4.98□□□□□ -1.61
Ggps1-201ENSMUST00000170957 Gm11939A2A592 99 aa4.97□□□□□ -1.61
Ggps1-201ENSMUST00000170957 Lrp1Q91ZX7 4545 aaKnown RBP4.96□□□□□ -1.62
Ggps1-201ENSMUST00000170957 Mycbp2Q7TPH6 4711 aa4.95□□□□□ -1.62
Ggps1-201ENSMUST00000170957 Kiaa1109A2AAE1 5005 aa4.94□□□□□ -1.62
Ggps1-201ENSMUST00000170957 Dnah7cA0A087WR13 4024 aa4.94□□□□□ -1.62
Ggps1-201ENSMUST00000170957 HydinQ80W93 5154 aa4.94□□□□□ -1.62
Ggps1-201ENSMUST00000170957 Crct1Q6PAI5 102 aa4.92□□□□□ -1.62
Ggps1-201ENSMUST00000170957 Gm10382Q3V0T5 144 aa4.92□□□□□ -1.62
Ggps1-201ENSMUST00000170957 4933415A04RikQ9D443 101 aa4.92□□□□□ -1.62
Ggps1-201ENSMUST00000170957 Gm3646F6S692 53 aa4.91□□□□□ -1.62
Ggps1-201ENSMUST00000170957 Fat1A0A1L1SQU7 4645 aa4.91□□□□□ -1.62
Ggps1-201ENSMUST00000170957 Dnah7aE9Q0T8 4024 aa4.91□□□□□ -1.62
Ggps1-201ENSMUST00000170957 Herc2Q4U2R1 4836 aa4.91□□□□□ -1.62
Ggps1-201ENSMUST00000170957 A0A1Y7VJH8 109 aa4.91□□□□□ -1.62
Ggps1-201ENSMUST00000170957 Gm17416Q30KP4 66 aa4.9□□□□□ -1.63
Ggps1-201ENSMUST00000170957 2310079G19RikQ9D6L6 185 aa4.89□□□□□ -1.63
Ggps1-201ENSMUST00000170957 Fat3Q8BNA6 4555 aa4.86□□□□□ -1.63
Ggps1-201ENSMUST00000170957 A030003K21RikA0A1Y7VIM3 128 aa4.86□□□□□ -1.63
Ggps1-201ENSMUST00000170957 Dnah2P0C6F1 4456 aa4.86□□□□□ -1.63
Ggps1-201ENSMUST00000170957 Mp68P56379 58 aa4.84□□□□□ -1.63
Ggps1-201ENSMUST00000170957 Ryr2E9Q401 4966 aaKnown RBP4.84□□□□□ -1.63
Ggps1-201ENSMUST00000170957 CriptO70333 101 aa4.82□□□□□ -1.64
Ggps1-201ENSMUST00000170957 Krtap28-10A0A1Y7VP58 119 aa4.82□□□□□ -1.64
Retrieved 100 of 22,080 RNA–protein pairs in 34.2 ms