RNA–Protein interactions for RNA: ENSMUST00000170957.2

Ggps1-201, Transcript of Geranylgeranyl pyrophosphate synthase, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ggps1, Length 4,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ggps1-201ENSMUST00000170957 Rhox8Q6VSS7 320 aa17.7■□□□□ 0.42
Ggps1-201ENSMUST00000170957 NischQ80TM9 1593 aa17.38■□□□□ 0.37
Ggps1-201ENSMUST00000170957 Abcc9P70170 1546 aa16.47■□□□□ 0.23
Ggps1-201ENSMUST00000170957 Abcc8B2RUS7 1588 aa16.29■□□□□ 0.2
Ggps1-201ENSMUST00000170957 Ccdc136Q3TVA9 1136 aa16.22■□□□□ 0.19
Ggps1-201ENSMUST00000170957 Gm35339A0A140LHH9 1649 aa16.19■□□□□ 0.18
Ggps1-201ENSMUST00000170957 Esf1Q3V1V3 845 aaKnown RBP15.72■□□□□ 0.11
Ggps1-201ENSMUST00000170957 Cngb1E1AZ71 1325 aa15.68■□□□□ 0.1
Ggps1-201ENSMUST00000170957 Zcchc6Q5BLK4 1491 aaKnown RBP15.56■□□□□ 0.08
Ggps1-201ENSMUST00000170957 Trim41Q5NCC3 630 aa15.55■□□□□ 0.08
Ggps1-201ENSMUST00000170957 Ehmt2Q9Z148 1263 aaKnown RBP15.5■□□□□ 0.07
Ggps1-201ENSMUST00000170957 Gab3Q8BSM5 595 aa15.44■□□□□ 0.06
Ggps1-201ENSMUST00000170957 Rtl1Q7M732 1744 aa15.33■□□□□ 0.04
Ggps1-201ENSMUST00000170957 Rb1cc1Q9ESK9 1588 aa15.22■□□□□ 0.03
Ggps1-201ENSMUST00000170957 Ccdc180J3QNE4 1664 aa15.19■□□□□ 0.02
Ggps1-201ENSMUST00000170957 NacadQ5SWP3 1504 aa15.17■□□□□ 0.02
Ggps1-201ENSMUST00000170957 Kdm5dQ62240 1548 aa15.14■□□□□ 0.01
Ggps1-201ENSMUST00000170957 Il27Q8K3I6 234 aa15.11■□□□□ 0.01
Ggps1-201ENSMUST00000170957 ScribQ80U72 1612 aa15.08■□□□□ 0.01
Ggps1-201ENSMUST00000170957 Myt1lP97500 1187 aa15.07■□□□□ 0
Ggps1-201ENSMUST00000170957 Zeb1Q64318 1117 aa15.07■□□□□ 0
Ggps1-201ENSMUST00000170957 Npm2Q80W85 207 aa15.07■□□□□ 0
Ggps1-201ENSMUST00000170957 Dcaf1Q80TR8 1506 aa15.02□□□□□ -0.01
Ggps1-201ENSMUST00000170957 HrcG5E8J6 738 aa14.93□□□□□ -0.02
Ggps1-201ENSMUST00000170957 Baz1aO88379 1555 aa14.88□□□□□ -0.03
Ggps1-201ENSMUST00000170957 Brd4Q9ESU6 1400 aaKnown RBP14.76□□□□□ -0.05
Ggps1-201ENSMUST00000170957 Rpgrip1Q9EPQ2 1331 aa14.75□□□□□ -0.05
Ggps1-201ENSMUST00000170957 Chic1Q8CBW7 227 aa14.71□□□□□ -0.05
Ggps1-201ENSMUST00000170957 Sycp2Q9CUU3 1500 aa14.71□□□□□ -0.05
Ggps1-201ENSMUST00000170957 UbtfP25976 765 aaKnown RBP14.59□□□□□ -0.07
Ggps1-201ENSMUST00000170957 Ap3b1Q9Z1T1 1105 aa14.59□□□□□ -0.07
Ggps1-201ENSMUST00000170957 Npm1Q61937 292 aaKnown RBP14.58□□□□□ -0.08
Ggps1-201ENSMUST00000170957 Ubl4bQ9CQ84 188 aa14.57□□□□□ -0.08
Ggps1-201ENSMUST00000170957 Crybg2B7ZCC2 1516 aa14.52□□□□□ -0.08
Ggps1-201ENSMUST00000170957 Cecr2E9Q2Z1 1453 aa14.51□□□□□ -0.09
Ggps1-201ENSMUST00000170957 Ube2uB1AUC4 352 aa14.49□□□□□ -0.09
Ggps1-201ENSMUST00000170957 Pds5bQ4VA53 1446 aaKnown RBP14.33□□□□□ -0.11
Ggps1-201ENSMUST00000170957 Golga3P55937 1487 aa14.32□□□□□ -0.12
Ggps1-201ENSMUST00000170957 Kif15Q6P9L6 1387 aa14.31□□□□□ -0.12
Ggps1-201ENSMUST00000170957 Smarca2Q6DIC0 1577 aa14.31□□□□□ -0.12
Ggps1-201ENSMUST00000170957 Ercc6F8VPZ5 1481 aa14.3□□□□□ -0.12
Ggps1-201ENSMUST00000170957 Cep164Q5DU05 1446 aa14.3□□□□□ -0.12
Ggps1-201ENSMUST00000170957 Plekhg3Q4VAC9 1341 aa14.28□□□□□ -0.12
Ggps1-201ENSMUST00000170957 Lmod2Q3UHZ5 550 aa14.27□□□□□ -0.13
Ggps1-201ENSMUST00000170957 Rsf1E9PWW9 1441 aaKnown RBP14.26□□□□□ -0.13
Ggps1-201ENSMUST00000170957 CftrP26361 1476 aa14.23□□□□□ -0.13
Ggps1-201ENSMUST00000170957 Acin1Q9JIX8 1338 aaKnown RBP14.23□□□□□ -0.13
Ggps1-201ENSMUST00000170957 Wdr66E9Q743 1299 aa14.23□□□□□ -0.13
Ggps1-201ENSMUST00000170957 Las1lA2BE28 776 aaKnown RBP14.2□□□□□ -0.14
Ggps1-201ENSMUST00000170957 Ccdc88bQ4QRL3 1481 aa14.2□□□□□ -0.14
Ggps1-201ENSMUST00000170957 Fam50aQ9WV03 339 aaKnown RBP14.19□□□□□ -0.14
Ggps1-201ENSMUST00000170957 Synj1Q8CHC4 1574 aa14.19□□□□□ -0.14
Ggps1-201ENSMUST00000170957 BicraF8VPZ9 1578 aa14.17□□□□□ -0.14
Ggps1-201ENSMUST00000170957 Atad2bE9Q166 1460 aaKnown RBP14.14□□□□□ -0.15
Ggps1-201ENSMUST00000170957 Ifnlr1Q8CGK5 535 aa14.14□□□□□ -0.15
Ggps1-201ENSMUST00000170957 Fkbp15Q6P9Q6 1216 aaKnown RBP14.12□□□□□ -0.15
Ggps1-201ENSMUST00000170957 Smarca4Q3TKT4 1613 aaKnown RBP14.1□□□□□ -0.15
Ggps1-201ENSMUST00000170957 NefmP08553 848 aa14.1□□□□□ -0.15
Ggps1-201ENSMUST00000170957 Mier1Q5UAK0 511 aa14.05□□□□□ -0.16
Ggps1-201ENSMUST00000170957 Clip1Q922J3 1391 aa14.04□□□□□ -0.16
Ggps1-201ENSMUST00000170957 Iqgap2Q3UQ44 1575 aa14□□□□□ -0.17
Ggps1-201ENSMUST00000170957 Ccdc18Q640L5 1455 aa13.99□□□□□ -0.17
Ggps1-201ENSMUST00000170957 Ppargc1bQ8VHJ7 1014 aa13.98□□□□□ -0.17
Ggps1-201ENSMUST00000170957 Zbtb7cQ8VCZ7 619 aa13.98□□□□□ -0.17
Ggps1-201ENSMUST00000170957 Dnajc5bQ9CQ94 199 aa13.96□□□□□ -0.18
Ggps1-201ENSMUST00000170957 Cux2P70298 1426 aa13.95□□□□□ -0.18
Ggps1-201ENSMUST00000170957 Phldb1Q6PDH0 1371 aaKnown RBP13.95□□□□□ -0.18
Ggps1-201ENSMUST00000170957 Pelp1Q9DBD5 1123 aaKnown RBP13.94□□□□□ -0.18
Ggps1-201ENSMUST00000170957 Cttnbp2B9EJA2 1648 aa13.93□□□□□ -0.18
Ggps1-201ENSMUST00000170957 Fmn1Q05860 1466 aa13.93□□□□□ -0.18
Ggps1-201ENSMUST00000170957 Neurod1Q60867 357 aa13.89□□□□□ -0.19
Ggps1-201ENSMUST00000170957 Eid3Q3V124 375 aa13.87□□□□□ -0.19
Ggps1-201ENSMUST00000170957 Setd5Q5XJV7 1441 aa13.87□□□□□ -0.19
Ggps1-201ENSMUST00000170957 Arhgap27A2AB59 869 aa13.8□□□□□ -0.2
Ggps1-201ENSMUST00000170957 BlmO88700 1416 aa13.8□□□□□ -0.2
Ggps1-201ENSMUST00000170957 Frmpd1A2AKB4 1549 aa13.79□□□□□ -0.2
Ggps1-201ENSMUST00000170957 Chic2Q9D9G3 165 aa13.78□□□□□ -0.2
Ggps1-201ENSMUST00000170957 Cep162Q6ZQ06 1403 aa13.75□□□□□ -0.21
Ggps1-201ENSMUST00000170957 Hnrnpul2Q00PI9 745 aaKnown RBP13.73□□□□□ -0.21
Ggps1-201ENSMUST00000170957 Rapgef2Q8CHG7 1496 aa13.73□□□□□ -0.21
Ggps1-201ENSMUST00000170957 NclP09405 707 aaKnown RBP13.72□□□□□ -0.21
Ggps1-201ENSMUST00000170957 Plppr3Q7TPB0 716 aa13.72□□□□□ -0.21
Ggps1-201ENSMUST00000170957 Slc24a1Q91WD8 1130 aa13.7□□□□□ -0.22
Ggps1-201ENSMUST00000170957 Cc2d2aQ8CFW7 1633 aa13.7□□□□□ -0.22
Ggps1-201ENSMUST00000170957 LrpprcQ6PB66 1392 aaKnown RBP13.69□□□□□ -0.22
Ggps1-201ENSMUST00000170957 Dhx29Q6PGC1 1365 aaKnown RBP13.68□□□□□ -0.22
Ggps1-201ENSMUST00000170957 Eea1Q8BL66 1411 aa13.67□□□□□ -0.22
Ggps1-201ENSMUST00000170957 TonslQ6NZL6 1363 aa13.67□□□□□ -0.22
Ggps1-201ENSMUST00000170957 Baz1bQ9Z277 1479 aa13.67□□□□□ -0.22
Ggps1-201ENSMUST00000170957 Supt5hO55201 1082 aaKnown RBP13.63□□□□□ -0.23
Ggps1-201ENSMUST00000170957 Wdr62Q3U3T8 1523 aa13.61□□□□□ -0.23
Ggps1-201ENSMUST00000170957 Zbtb4Q5F293 982 aa13.6□□□□□ -0.23
Ggps1-201ENSMUST00000170957 Mapk8ip2Q9ERE9 830 aa13.59□□□□□ -0.23
Ggps1-201ENSMUST00000170957 Ttbk1Q6PCN3 1308 aa13.58□□□□□ -0.24
Ggps1-201ENSMUST00000170957 Pcgf6Q99NA9 353 aa13.57□□□□□ -0.24
Ggps1-201ENSMUST00000170957 Rpap1Q80TE0 1409 aa13.56□□□□□ -0.24
Ggps1-201ENSMUST00000170957 Aebp1Q640N1 1128 aa13.56□□□□□ -0.24
Ggps1-201ENSMUST00000170957 AknaQ80VW7 1404 aa13.55□□□□□ -0.24
Ggps1-201ENSMUST00000170957 Erich6D3Z6S9 713 aa13.55□□□□□ -0.24
Ggps1-201ENSMUST00000170957 Os9Q8K2C7 672 aa13.54□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 18.5 ms