RNA–Protein interactions for RNA: ENSMUST00000163419.7

Scaf4-202, Transcript of SR-related CTD-associated factor 4, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Scaf4, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4-202ENSMUST00000163419 Cypt14J3QPF7 87 aa7.18□□□□□ -1.26
Scaf4-202ENSMUST00000163419 Hspg2Q05793 3707 aaKnown RBP7.17□□□□□ -1.26
Scaf4-202ENSMUST00000163419 Limd2Q8BGB5 128 aa7.17□□□□□ -1.26
Scaf4-202ENSMUST00000163419 Gm10320E9PW43 113 aa7.16□□□□□ -1.26
Scaf4-202ENSMUST00000163419 Krtap15-1Q9QZU5 150 aa7.15□□□□□ -1.26
Scaf4-202ENSMUST00000163419 VwfQ8CIZ8 2813 aa7.15□□□□□ -1.27
Scaf4-202ENSMUST00000163419 Coa5Q99M07 74 aa7.12□□□□□ -1.27
Scaf4-202ENSMUST00000163419 Chtf8P0CG14 533 aa7.1□□□□□ -1.27
Scaf4-202ENSMUST00000163419 2310034C09RikQ9D746 214 aa7.09□□□□□ -1.27
Scaf4-202ENSMUST00000163419 Sprr1aQ62266 144 aa7.09□□□□□ -1.27
Scaf4-202ENSMUST00000163419 BsnO88737 3942 aa7.06□□□□□ -1.28
Scaf4-202ENSMUST00000163419 Odf3bQ5M8M2 238 aa7.05□□□□□ -1.28
Scaf4-202ENSMUST00000163419 Spink7Q6IE32 76 aa7.03□□□□□ -1.28
Scaf4-202ENSMUST00000163419 Gm2696A0A1W2P709 240 aa7□□□□□ -1.29
Scaf4-202ENSMUST00000163419 Cdc42se1Q8BHL7 80 aa7□□□□□ -1.29
Scaf4-202ENSMUST00000163419 2310061N02RikQ9D6S9 174 aa6.99□□□□□ -1.29
Scaf4-202ENSMUST00000163419 Gm10139O88245 57 aa6.99□□□□□ -1.29
Scaf4-202ENSMUST00000163419 Gm4491E0CX42 125 aa6.95□□□□□ -1.3
Scaf4-202ENSMUST00000163419 Phxr4P15974 95 aa6.93□□□□□ -1.3
Scaf4-202ENSMUST00000163419 Gm21798J3QNU5 87 aa6.93□□□□□ -1.3
Scaf4-202ENSMUST00000163419 Megf8P60882 2789 aa6.93□□□□□ -1.3
Scaf4-202ENSMUST00000163419 Krtap29-1A2A5X4 342 aa6.91□□□□□ -1.3
Scaf4-202ENSMUST00000163419 Fam229aB2KGE5 128 aa6.91□□□□□ -1.3
Scaf4-202ENSMUST00000163419 Ank2Q8C8R3 3898 aa6.9□□□□□ -1.3
Scaf4-202ENSMUST00000163419 Krtap14O08640 167 aa6.9□□□□□ -1.31
Scaf4-202ENSMUST00000163419 Sec61bQ9CQS8 96 aaKnown RBP6.89□□□□□ -1.31
Scaf4-202ENSMUST00000163419 Gm16253D3Z167 63 aa6.88□□□□□ -1.31
Scaf4-202ENSMUST00000163419 Uqcr11Q9CPX8 56 aa6.88□□□□□ -1.31
Scaf4-202ENSMUST00000163419 Pla2g10Q9QXX3 151 aa6.87□□□□□ -1.31
Scaf4-202ENSMUST00000163419 Tnp2P11378 117 aa6.86□□□□□ -1.31
Scaf4-202ENSMUST00000163419 Mp68P56379 58 aa6.86□□□□□ -1.31
Scaf4-202ENSMUST00000163419 Fbn1Q61554 2873 aaKnown RBP6.86□□□□□ -1.31
Scaf4-202ENSMUST00000163419 A730071L15RikQ8C4X0 137 aa6.85□□□□□ -1.31
Scaf4-202ENSMUST00000163419 Csmd3Q80T79 3707 aa6.85□□□□□ -1.31
Scaf4-202ENSMUST00000163419 Gm5767A0A0J9YTU8 78 aa6.83□□□□□ -1.32
Scaf4-202ENSMUST00000163419 Muc6Q80T03 2850 aa6.81□□□□□ -1.32
Scaf4-202ENSMUST00000163419 Gm3880A0A1B0GSB3 72 aa6.73□□□□□ -1.33
Scaf4-202ENSMUST00000163419 Gm37013Q8K491 104 aa6.69□□□□□ -1.34
Scaf4-202ENSMUST00000163419 Gm10643Q3URG9 111 aa6.68□□□□□ -1.34
Scaf4-202ENSMUST00000163419 Gm9955Q8CEJ8 102 aa6.67□□□□□ -1.34
Scaf4-202ENSMUST00000163419 Gm19426M0QWC7 77 aa6.65□□□□□ -1.35
Scaf4-202ENSMUST00000163419 CriptO70333 101 aa6.61□□□□□ -1.35
Scaf4-202ENSMUST00000163419 4933415A04RikQ9D443 101 aa6.61□□□□□ -1.35
Scaf4-202ENSMUST00000163419 Gm5965D3Z724 196 aa6.58□□□□□ -1.36
Scaf4-202ENSMUST00000163419 Camk2n1Q6QWF9 78 aa6.56□□□□□ -1.36
Scaf4-202ENSMUST00000163419 BC029722A0A0N4SW31 51 aa6.56□□□□□ -1.36
Scaf4-202ENSMUST00000163419 Gm3646F6S692 53 aa6.56□□□□□ -1.36
Scaf4-202ENSMUST00000163419 2310057N15RikQ9D6T8 200 aa6.54□□□□□ -1.36
Scaf4-202ENSMUST00000163419 Kmt2aP55200 3966 aa6.53□□□□□ -1.36
Scaf4-202ENSMUST00000163419 1700042G07RikB1AUF7 90 aa6.52□□□□□ -1.37
Scaf4-202ENSMUST00000163419 Gm20538F6Z9R1 75 aa6.51□□□□□ -1.37
Scaf4-202ENSMUST00000163419 Dnah7bL7N1Y0 4068 aa6.48□□□□□ -1.37
Scaf4-202ENSMUST00000163419 Dnah3Q8BW94 4083 aa6.46□□□□□ -1.38
Scaf4-202ENSMUST00000163419 Gm2310J3QNJ2 377 aa6.44□□□□□ -1.38
Scaf4-202ENSMUST00000163419 Rps29P62274 56 aa6.43□□□□□ -1.38
Scaf4-202ENSMUST00000163419 Rpl37Q9D823 97 aa6.4□□□□□ -1.38
Scaf4-202ENSMUST00000163419 Dnah1E9Q8T7 4250 aa6.39□□□□□ -1.39
Scaf4-202ENSMUST00000163419 Dnah11E9Q7N9 4488 aa6.34□□□□□ -1.39
Scaf4-202ENSMUST00000163419 Gm10382Q3V0T5 144 aa6.32□□□□□ -1.4
Scaf4-202ENSMUST00000163419 Cox6b2Q80ZN9 88 aa6.3□□□□□ -1.4
Scaf4-202ENSMUST00000163419 D6Ertd527eA0A0N4SWI3 464 aa6.29□□□□□ -1.4
Scaf4-202ENSMUST00000163419 Dnah17Q69Z23 4481 aa6.29□□□□□ -1.4
Scaf4-202ENSMUST00000163419 A930033H14RikG5E8X6 103 aa6.28□□□□□ -1.4
Scaf4-202ENSMUST00000163419 Gm9736A0A1W2P7N1 277 aa6.28□□□□□ -1.4
Scaf4-202ENSMUST00000163419 Dnah10D3YYQ8 4591 aa6.27□□□□□ -1.41
Scaf4-202ENSMUST00000163419 Dnah9B1AR51 4484 aa6.23□□□□□ -1.41
Scaf4-202ENSMUST00000163419 Dnah14A0A140LIJ4 4489 aa6.22□□□□□ -1.41
Scaf4-202ENSMUST00000163419 Dnah6E9Q0B6 4144 aa6.19□□□□□ -1.42
Scaf4-202ENSMUST00000163419 Romo1P60603 79 aa6.18□□□□□ -1.42
Scaf4-202ENSMUST00000163419 Dync2h1Q45VK7 4306 aa6.11□□□□□ -1.43
Scaf4-202ENSMUST00000163419 Gm9918Q8BUR5 174 aa6.04□□□□□ -1.44
Scaf4-202ENSMUST00000163419 Gm10318A0A1W2P728 225 aa6.03□□□□□ -1.44
Scaf4-202ENSMUST00000163419 Huwe1Q7TMY8 4377 aaKnown RBP6.01□□□□□ -1.45
Scaf4-202ENSMUST00000163419 Gm21887J3QQ04 176 aa5.99□□□□□ -1.45
Scaf4-202ENSMUST00000163419 Dnah7cA0A087WR13 4024 aa5.98□□□□□ -1.45
Scaf4-202ENSMUST00000163419 Dnah7aE9Q0T8 4024 aa5.96□□□□□ -1.45
Scaf4-202ENSMUST00000163419 Crct1Q6PAI5 102 aa5.96□□□□□ -1.46
Scaf4-202ENSMUST00000163419 Krtap19-5O08632 62 aa5.95□□□□□ -1.46
Scaf4-202ENSMUST00000163419 Hectd4E9Q2E4 4418 aa5.95□□□□□ -1.46
Scaf4-202ENSMUST00000163419 Dnah5Q8VHE6 4621 aa5.95□□□□□ -1.46
Scaf4-202ENSMUST00000163419 Fras1Q80T14 4010 aa5.95□□□□□ -1.46
Scaf4-202ENSMUST00000163419 TnxbO35452 4006 aa5.93□□□□□ -1.46
Scaf4-202ENSMUST00000163419 PlecQ9QXS1 4691 aaKnown RBP5.88□□□□□ -1.47
Scaf4-202ENSMUST00000163419 PrkdcP97313 4128 aa5.85□□□□□ -1.47
Scaf4-202ENSMUST00000163419 Stard9Q80TF6 4561 aa5.85□□□□□ -1.47
Scaf4-202ENSMUST00000163419 Vps13dB1ART2 4390 aa5.84□□□□□ -1.47
Scaf4-202ENSMUST00000163419 Ryr1E9PZQ0 5035 aa5.82□□□□□ -1.48
Scaf4-202ENSMUST00000163419 Gm17416Q30KP4 66 aa5.81□□□□□ -1.48
Scaf4-202ENSMUST00000163419 Dnah2P0C6F1 4456 aa5.81□□□□□ -1.48
Scaf4-202ENSMUST00000163419 Gm20537G3UYK7 97 aa5.76□□□□□ -1.49
Scaf4-202ENSMUST00000163419 2310079G19RikQ9D6L6 185 aa5.75□□□□□ -1.49
Scaf4-202ENSMUST00000163419 Pkd1O08852 4293 aa5.74□□□□□ -1.49
Scaf4-202ENSMUST00000163419 2210017I01RikA0A0A6YVV1 95 aa5.74□□□□□ -1.49
Scaf4-202ENSMUST00000163419 Gm11939A2A592 99 aa5.73□□□□□ -1.49
Scaf4-202ENSMUST00000163419 Pkhd1E9PZ36 4059 aa5.72□□□□□ -1.49
Scaf4-202ENSMUST00000163419 Tnp1P10856 55 aa5.7□□□□□ -1.5
Scaf4-202ENSMUST00000163419 B930094E09RikQ8C4T2 136 aa5.69□□□□□ -1.5
Scaf4-202ENSMUST00000163419 ApobE9Q414 4505 aa5.68□□□□□ -1.5
Scaf4-202ENSMUST00000163419 Lrp1bQ9JI18 4599 aa5.66□□□□□ -1.5
Scaf4-202ENSMUST00000163419 Krtap3-2Q9D638 99 aa5.65□□□□□ -1.5
Retrieved 100 of 22,080 RNA–protein pairs in 56 ms