RNA–Protein interactions for RNA: ENSMUST00000114888.9

Hmga1-201, Transcript of High mobility group protein HMG-I/HMG-Y, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Hmga1, Length 1,593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1-201ENSMUST00000114888 Cdip1Q9DB75 208 aa8.18□□□□□ -1.1
Hmga1-201ENSMUST00000114888 Gm26920S4R2A5 56 aa8.18□□□□□ -1.1
Hmga1-201ENSMUST00000114888 Rbm3O89086 153 aaKnown RBP8.17□□□□□ -1.1
Hmga1-201ENSMUST00000114888 Smlr1J3QMJ4 66 aa8.16□□□□□ -1.1
Hmga1-201ENSMUST00000114888 Fam240bJ3QMB3 78 aa8.13□□□□□ -1.11
Hmga1-201ENSMUST00000114888 Trav14d-3-dv8A0A075B619 120 aa8.12□□□□□ -1.11
Hmga1-201ENSMUST00000114888 Gm9821Q8K076 103 aa8.12□□□□□ -1.11
Hmga1-201ENSMUST00000114888 Gtf2h5Q8K2X8 71 aa8.12□□□□□ -1.11
Hmga1-201ENSMUST00000114888 Pxt1Q8K459 51 aa8.12□□□□□ -1.11
Hmga1-201ENSMUST00000114888 Gm44790A0A0N4SV91 103 aa8.11□□□□□ -1.11
Hmga1-201ENSMUST00000114888 Gm11939A2A592 99 aa8.11□□□□□ -1.11
Hmga1-201ENSMUST00000114888 Pde6gP09174 87 aa8.1□□□□□ -1.11
Hmga1-201ENSMUST00000114888 Cypt15B1AXS0 87 aa8.08□□□□□ -1.12
Hmga1-201ENSMUST00000114888 Gm20604F8WIA3 75 aa8.07□□□□□ -1.12
Hmga1-201ENSMUST00000114888 Tmem213Q08EA8 116 aa8.07□□□□□ -1.12
Hmga1-201ENSMUST00000114888 UqcrqQ9CQ69 82 aa8.05□□□□□ -1.12
Hmga1-201ENSMUST00000114888 Mrpl34Q99N91 92 aa8.05□□□□□ -1.12
Hmga1-201ENSMUST00000114888 C130032M10RikQ8C888 123 aa8.04□□□□□ -1.12
Hmga1-201ENSMUST00000114888 Krtap15-1Q9QZU5 150 aa8.04□□□□□ -1.12
Hmga1-201ENSMUST00000114888 Gm26620Q9CY65 116 aa8.03□□□□□ -1.12
Hmga1-201ENSMUST00000114888 Gm28539A0A087WSL9 92 aa8.02□□□□□ -1.13
Hmga1-201ENSMUST00000114888 Defa21Q8C1P2 93 aa8.02□□□□□ -1.13
Hmga1-201ENSMUST00000114888 Gm37013Q8K491 104 aa8.02□□□□□ -1.13
Hmga1-201ENSMUST00000114888 Xcl1P47993 114 aa7.98□□□□□ -1.13
Hmga1-201ENSMUST00000114888 Sec61gP60060 68 aa7.98□□□□□ -1.13
Hmga1-201ENSMUST00000114888 Ormdl1Q921I0 153 aa7.97□□□□□ -1.13
Hmga1-201ENSMUST00000114888 Sec61bQ9CQS8 96 aaKnown RBP7.97□□□□□ -1.13
Hmga1-201ENSMUST00000114888 Igkv3-3A0A140T8Q0 119 aa7.95□□□□□ -1.14
Hmga1-201ENSMUST00000114888 Reg3aO09037 175 aa7.95□□□□□ -1.14
Hmga1-201ENSMUST00000114888 2310057N15RikQ9D6T8 200 aa7.94□□□□□ -1.14
Hmga1-201ENSMUST00000114888 Smim20D3Z7Q2 69 aa7.92□□□□□ -1.14
Hmga1-201ENSMUST00000114888 Rpl37Q9D823 97 aa7.9□□□□□ -1.14
Hmga1-201ENSMUST00000114888 Lyrm7Q9DA03 104 aa7.88□□□□□ -1.15
Hmga1-201ENSMUST00000114888 Krtap1-3A2A588 173 aa7.87□□□□□ -1.15
Hmga1-201ENSMUST00000114888 Trav3-1Q5R1I8 114 aa7.87□□□□□ -1.15
Hmga1-201ENSMUST00000114888 BikO70337 150 aa7.85□□□□□ -1.15
Hmga1-201ENSMUST00000114888 MplkipQ9D011 178 aa7.84□□□□□ -1.15
Hmga1-201ENSMUST00000114888 ZanO88799 5376 aa7.83□□□□□ -1.16
Hmga1-201ENSMUST00000114888 2310034C09RikQ9D746 214 aa7.81□□□□□ -1.16
Hmga1-201ENSMUST00000114888 Ubl5Q9EPV8 73 aa7.81□□□□□ -1.16
Hmga1-201ENSMUST00000114888 Igkv8-19A0A0G2JFN8 121 aa7.8□□□□□ -1.16
Hmga1-201ENSMUST00000114888 SmcpP15265 143 aa7.8□□□□□ -1.16
Hmga1-201ENSMUST00000114888 Crct1Q6PAI5 102 aa7.8□□□□□ -1.16
Hmga1-201ENSMUST00000114888 Defb13Q8R2I4 64 aa7.8□□□□□ -1.16
Hmga1-201ENSMUST00000114888 Gm10267M0QWD8 85 aa7.78□□□□□ -1.16
Hmga1-201ENSMUST00000114888 Prr13Q9CQJ5 137 aa7.78□□□□□ -1.16
Hmga1-201ENSMUST00000114888 Samd13D3YUG0 102 aa7.75□□□□□ -1.17
Hmga1-201ENSMUST00000114888 7530416G11RikJ3QJX6 159 aa7.75□□□□□ -1.17
Hmga1-201ENSMUST00000114888 Anapc13Q8R034 74 aa7.75□□□□□ -1.17
Hmga1-201ENSMUST00000114888 BatfO35284 125 aa7.74□□□□□ -1.17
Hmga1-201ENSMUST00000114888 Fat4Q2PZL6 4981 aa7.73□□□□□ -1.17
Hmga1-201ENSMUST00000114888 Rnase13Q5GAM7 153 aa7.69□□□□□ -1.18
Hmga1-201ENSMUST00000114888 Gm10337F7DEP7 55 aa7.68□□□□□ -1.18
Hmga1-201ENSMUST00000114888 Apoc4Q61268 124 aa7.68□□□□□ -1.18
Hmga1-201ENSMUST00000114888 LorP18165 486 aa7.67□□□□□ -1.18
Hmga1-201ENSMUST00000114888 H2al1aQ5M8Q2 105 aa7.67□□□□□ -1.18
Hmga1-201ENSMUST00000114888 Prr15lQ8JZM2 100 aa7.64□□□□□ -1.19
Hmga1-201ENSMUST00000114888 Sox16Q62247 57 aa7.63□□□□□ -1.19
Hmga1-201ENSMUST00000114888 Rps28P62858 69 aaKnown RBP7.63□□□□□ -1.19
Hmga1-201ENSMUST00000114888 Krtap16-3Q8C1I6 86 aa7.63□□□□□ -1.19
Hmga1-201ENSMUST00000114888 Krtap3-2Q9D638 99 aa7.63□□□□□ -1.19
Hmga1-201ENSMUST00000114888 Krtap3-3Q9D7P0 99 aa7.63□□□□□ -1.19
Hmga1-201ENSMUST00000114888 Rnf213E9Q555 5152 aaKnown RBP7.62□□□□□ -1.19
Hmga1-201ENSMUST00000114888 Tmem254aP0DN89 123 aa7.61□□□□□ -1.19
Hmga1-201ENSMUST00000114888 Tmem254bP0DN90 123 aa7.61□□□□□ -1.19
Hmga1-201ENSMUST00000114888 Tmem254cP0DN91 123 aa7.61□□□□□ -1.19
Hmga1-201ENSMUST00000114888 Krtap19-1Q925H2 87 aa7.6□□□□□ -1.19
Hmga1-201ENSMUST00000114888 Krtap19-3Q925H6 87 aa7.6□□□□□ -1.19
Hmga1-201ENSMUST00000114888 Atp5eP56382 52 aa7.59□□□□□ -1.19
Hmga1-201ENSMUST00000114888 H2al1bA0A087WP11 105 aa7.58□□□□□ -1.2
Hmga1-201ENSMUST00000114888 H2al1kJ3QP08 105 aa7.58□□□□□ -1.2
Hmga1-201ENSMUST00000114888 H2al1eQ810S6 105 aa7.58□□□□□ -1.2
Hmga1-201ENSMUST00000114888 H2al1mQ9DAD9 105 aa7.58□□□□□ -1.2
Hmga1-201ENSMUST00000114888 A0A286YE49 62 aa7.57□□□□□ -1.2
Hmga1-201ENSMUST00000114888 Gm10318A0A1W2P728 225 aa7.53□□□□□ -1.2
Hmga1-201ENSMUST00000114888 9230102O04RikA2ASX7 82 aa7.53□□□□□ -1.2
Hmga1-201ENSMUST00000114888 Fam229aB2KGE5 128 aa7.53□□□□□ -1.2
Hmga1-201ENSMUST00000114888 1700042G07RikB1AUF7 90 aa7.52□□□□□ -1.21
Hmga1-201ENSMUST00000114888 Gm4491E0CX42 125 aa7.51□□□□□ -1.21
Hmga1-201ENSMUST00000114888 Hist1h4aP62806 103 aaKnown RBP7.51□□□□□ -1.21
Hmga1-201ENSMUST00000114888 Gm17416Q30KP4 66 aa7.5□□□□□ -1.21
Hmga1-201ENSMUST00000114888 Spink8Q09TK9 105 aa7.49□□□□□ -1.21
Hmga1-201ENSMUST00000114888 Naa38Q9D2U5 125 aa7.48□□□□□ -1.21
Hmga1-201ENSMUST00000114888 Gm10197F6QEY5 67 aa7.47□□□□□ -1.21
Hmga1-201ENSMUST00000114888 Gm19402J3QJV4 266 aa7.46□□□□□ -1.22
Hmga1-201ENSMUST00000114888 Krtap1-4Q3V2D6 188 aa7.43□□□□□ -1.22
Hmga1-201ENSMUST00000114888 1700074P13RikQ9D9G7 251 aa7.41□□□□□ -1.22
Hmga1-201ENSMUST00000114888 Gm10061D3Z714 54 aa7.4□□□□□ -1.22
Hmga1-201ENSMUST00000114888 Chtf8P0CG14 533 aa7.38□□□□□ -1.23
Hmga1-201ENSMUST00000114888 Ndufc1Q9CQY9 76 aa7.38□□□□□ -1.23
Hmga1-201ENSMUST00000114888 Fam229bQ8CF36 80 aa7.37□□□□□ -1.23
Hmga1-201ENSMUST00000114888 Q8BGJ3 129 aa7.34□□□□□ -1.23
Hmga1-201ENSMUST00000114888 Gm10999F6Q4M4 69 aa7.32□□□□□ -1.24
Hmga1-201ENSMUST00000114888 Gm10160F6Y577 67 aa7.29□□□□□ -1.24
Hmga1-201ENSMUST00000114888 Serp2Q6TAW2 65 aa7.29□□□□□ -1.24
Hmga1-201ENSMUST00000114888 Krtap13-1Q8K198 168 aa7.29□□□□□ -1.24
Hmga1-201ENSMUST00000114888 Gm19935A0A1B0GSF9 52 aa7.29□□□□□ -1.24
Hmga1-201ENSMUST00000114888 SspoQ8CG65 4998 aa7.28□□□□□ -1.24
Hmga1-201ENSMUST00000114888 4930518I15RikQ3V2W7 57 aa7.26□□□□□ -1.25
Hmga1-201ENSMUST00000114888 Tmem258P61166 79 aa7.25□□□□□ -1.25
Retrieved 100 of 22,080 RNA–protein pairs in 14.1 ms