RNA–Protein interactions for RNA: ENSMUST00000114888.9

Hmga1-201, Transcript of High mobility group protein HMG-I/HMG-Y, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Hmga1, Length 1,593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1-201ENSMUST00000114888 Gm35339A0A140LHH9 1649 aa33.17■■■□□ 2.9
Hmga1-201ENSMUST00000114888 NischQ80TM9 1593 aa32.75■■■□□ 2.83
Hmga1-201ENSMUST00000114888 Abcc9P70170 1546 aa31.72■■■□□ 2.67
Hmga1-201ENSMUST00000114888 Abcc8B2RUS7 1588 aa31.59■■■□□ 2.65
Hmga1-201ENSMUST00000114888 ScribQ80U72 1612 aa30.41■■■□□ 2.46
Hmga1-201ENSMUST00000114888 NacadQ5SWP3 1504 aa29.43■■■□□ 2.3
Hmga1-201ENSMUST00000114888 Kdm5dQ62240 1548 aa29.42■■■□□ 2.3
Hmga1-201ENSMUST00000114888 Dcaf1Q80TR8 1506 aa29.14■■■□□ 2.26
Hmga1-201ENSMUST00000114888 Sycp2Q9CUU3 1500 aa28.84■■■□□ 2.21
Hmga1-201ENSMUST00000114888 Rb1cc1Q9ESK9 1588 aa28.59■■■□□ 2.17
Hmga1-201ENSMUST00000114888 BicraF8VPZ9 1578 aa28.43■■■□□ 2.14
Hmga1-201ENSMUST00000114888 Rhox8Q6VSS7 320 aa28.39■■■□□ 2.14
Hmga1-201ENSMUST00000114888 Ccdc180J3QNE4 1664 aa28.27■■■□□ 2.12
Hmga1-201ENSMUST00000114888 Baz1aO88379 1555 aa28.18■■■□□ 2.1
Hmga1-201ENSMUST00000114888 Crybg2B7ZCC2 1516 aa28.02■■■□□ 2.08
Hmga1-201ENSMUST00000114888 Zcchc6Q5BLK4 1491 aaKnown RBP27.7■■■□□ 2.02
Hmga1-201ENSMUST00000114888 Pds5bQ4VA53 1446 aaKnown RBP27.57■■■□□ 2
Hmga1-201ENSMUST00000114888 Smarca2Q6DIC0 1577 aa27.38■■□□□ 1.97
Hmga1-201ENSMUST00000114888 Atad2bE9Q166 1460 aaKnown RBP27.35■■□□□ 1.97
Hmga1-201ENSMUST00000114888 Thoc2B1AZI6 1594 aaKnown RBP27.32■■□□□ 1.96
Hmga1-201ENSMUST00000114888 Dnajc5bQ9CQ94 199 aa27.27■■□□□ 1.96
Hmga1-201ENSMUST00000114888 Smarca4Q3TKT4 1613 aaKnown RBP27.24■■□□□ 1.95
Hmga1-201ENSMUST00000114888 Rtl1Q7M732 1744 aa27.23■■□□□ 1.95
Hmga1-201ENSMUST00000114888 Cecr2E9Q2Z1 1453 aa27.15■■□□□ 1.94
Hmga1-201ENSMUST00000114888 Iqgap2Q3UQ44 1575 aa27.07■■□□□ 1.92
Hmga1-201ENSMUST00000114888 Ercc6F8VPZ5 1481 aa27.02■■□□□ 1.92
Hmga1-201ENSMUST00000114888 Cc2d2aQ8CFW7 1633 aa26.89■■□□□ 1.89
Hmga1-201ENSMUST00000114888 Wdr62Q3U3T8 1523 aa26.8■■□□□ 1.88
Hmga1-201ENSMUST00000114888 Fam135aQ6NS59 1506 aa26.73■■□□□ 1.87
Hmga1-201ENSMUST00000114888 Frmpd1A2AKB4 1549 aa26.73■■□□□ 1.87
Hmga1-201ENSMUST00000114888 Cttnbp2B9EJA2 1648 aa26.64■■□□□ 1.85
Hmga1-201ENSMUST00000114888 CftrP26361 1476 aa26.6■■□□□ 1.85
Hmga1-201ENSMUST00000114888 Brd4Q9ESU6 1400 aaKnown RBP26.59■■□□□ 1.85
Hmga1-201ENSMUST00000114888 Synj1Q8CHC4 1574 aa26.58■■□□□ 1.85
Hmga1-201ENSMUST00000114888 Ccdc136Q3TVA9 1136 aa26.53■■□□□ 1.84
Hmga1-201ENSMUST00000114888 Phldb1Q6PDH0 1371 aaKnown RBP26.52■■□□□ 1.84
Hmga1-201ENSMUST00000114888 Unc13aQ4KUS2 1712 aa26.49■■□□□ 1.83
Hmga1-201ENSMUST00000114888 Baz1bQ9Z277 1479 aa26.44■■□□□ 1.82
Hmga1-201ENSMUST00000114888 Ubl4bQ9CQ84 188 aa26.23■■□□□ 1.79
Hmga1-201ENSMUST00000114888 Trim41Q5NCC3 630 aa26.16■■□□□ 1.78
Hmga1-201ENSMUST00000114888 Mrc2Q64449 1479 aa26.09■■□□□ 1.77
Hmga1-201ENSMUST00000114888 Esf1Q3V1V3 845 aaKnown RBP26.08■■□□□ 1.77
Hmga1-201ENSMUST00000114888 Rsf1E9PWW9 1441 aaKnown RBP25.89■■□□□ 1.74
Hmga1-201ENSMUST00000114888 Kif15Q6P9L6 1387 aa25.81■■□□□ 1.72
Hmga1-201ENSMUST00000114888 Lamc3Q9R0B6 1581 aa25.81■■□□□ 1.72
Hmga1-201ENSMUST00000114888 Cux2P70298 1426 aa25.76■■□□□ 1.71
Hmga1-201ENSMUST00000114888 Top2bQ64511 1612 aa25.72■■□□□ 1.71
Hmga1-201ENSMUST00000114888 Golga3P55937 1487 aa25.71■■□□□ 1.71
Hmga1-201ENSMUST00000114888 Kif21aQ9QXL2 1672 aa25.6■■□□□ 1.69
Hmga1-201ENSMUST00000114888 TnnQ80Z71 1560 aa25.59■■□□□ 1.69
Hmga1-201ENSMUST00000114888 Cngb1E1AZ71 1325 aa25.56■■□□□ 1.68
Hmga1-201ENSMUST00000114888 Lrriq1Q0P5X1 1673 aa25.55■■□□□ 1.68
Hmga1-201ENSMUST00000114888 Npm1Q61937 292 aaKnown RBP25.48■■□□□ 1.67
Hmga1-201ENSMUST00000114888 Cep164Q5DU05 1446 aa25.44■■□□□ 1.66
Hmga1-201ENSMUST00000114888 Ccdc18Q640L5 1455 aa25.42■■□□□ 1.66
Hmga1-201ENSMUST00000114888 Fmn1Q05860 1466 aa25.39■■□□□ 1.66
Hmga1-201ENSMUST00000114888 Camsap1A2AHC3 1581 aa25.38■■□□□ 1.65
Hmga1-201ENSMUST00000114888 Il27Q8K3I6 234 aa25.28■■□□□ 1.64
Hmga1-201ENSMUST00000114888 Dhx29Q6PGC1 1365 aaKnown RBP25.24■■□□□ 1.63
Hmga1-201ENSMUST00000114888 LrpprcQ6PB66 1392 aaKnown RBP25.22■■□□□ 1.63
Hmga1-201ENSMUST00000114888 Eif4g3Q80XI3 1579 aaKnown RBP25.2■■□□□ 1.62
Hmga1-201ENSMUST00000114888 Crocc2F6XLV1 1638 aa25.18■■□□□ 1.62
Hmga1-201ENSMUST00000114888 Urb2E9Q7L1 1524 aaKnown RBP25.15■■□□□ 1.62
Hmga1-201ENSMUST00000114888 Plb1Q3TTY0 1478 aa25.11■■□□□ 1.61
Hmga1-201ENSMUST00000114888 PogzQ8BZH4 1409 aaKnown RBP25.1■■□□□ 1.61
Hmga1-201ENSMUST00000114888 Ccdc88bQ4QRL3 1481 aa25.04■■□□□ 1.6
Hmga1-201ENSMUST00000114888 Grin2bQ01097 1482 aa25.02■■□□□ 1.6
Hmga1-201ENSMUST00000114888 Duox2A2AQ99 1517 aa24.99■■□□□ 1.59
Hmga1-201ENSMUST00000114888 Top2aQ01320 1528 aaKnown RBP24.96■■□□□ 1.59
Hmga1-201ENSMUST00000114888 Ift140E9PY46 1464 aa24.93■■□□□ 1.58
Hmga1-201ENSMUST00000114888 Samd9lQ69Z37 1561 aa24.84■■□□□ 1.57
Hmga1-201ENSMUST00000114888 Rusc2Q80U22 1514 aa24.83■■□□□ 1.57
Hmga1-201ENSMUST00000114888 Efcab5A0JP43 1406 aa24.83■■□□□ 1.57
Hmga1-201ENSMUST00000114888 Chic1Q8CBW7 227 aa24.83■■□□□ 1.57
Hmga1-201ENSMUST00000114888 NrkQ9R0G8 1455 aa24.79■■□□□ 1.56
Hmga1-201ENSMUST00000114888 Setd1bQ8CFT2 1985 aa24.77■■□□□ 1.56
Hmga1-201ENSMUST00000114888 Pbrm1Q8BSQ9 1634 aaKnown RBP24.77■■□□□ 1.56
Hmga1-201ENSMUST00000114888 Disp1Q3TDN0 1521 aa24.76■■□□□ 1.55
Hmga1-201ENSMUST00000114888 Shroom2A2ALU4 1481 aa24.74■■□□□ 1.55
Hmga1-201ENSMUST00000114888 Shroom4Q1W617 1475 aa24.69■■□□□ 1.54
Hmga1-201ENSMUST00000114888 Nup160Q9Z0W3 1402 aaKnown RBP24.66■■□□□ 1.54
Hmga1-201ENSMUST00000114888 PtprkP35822 1457 aa24.63■■□□□ 1.53
Hmga1-201ENSMUST00000114888 Rad54l2Q99NG0 1466 aa24.61■■□□□ 1.53
Hmga1-201ENSMUST00000114888 Cc2d2bA0A286YDU8 1405 aa24.6■■□□□ 1.53
Hmga1-201ENSMUST00000114888 Magi3Q9EQJ9 1476 aa24.58■■□□□ 1.52
Hmga1-201ENSMUST00000114888 Grin2aP35436 1464 aa24.57■■□□□ 1.52
Hmga1-201ENSMUST00000114888 SynmQ70IV5 1561 aa24.54■■□□□ 1.52
Hmga1-201ENSMUST00000114888 HrcG5E8J6 738 aa24.51■■□□□ 1.51
Hmga1-201ENSMUST00000114888 Dnajc5P60904 198 aa24.51■■□□□ 1.51
Hmga1-201ENSMUST00000114888 Gpatch8A2A6A1 1505 aa24.49■■□□□ 1.51
Hmga1-201ENSMUST00000114888 AqrQ8CFQ3 1481 aaKnown RBP24.47■■□□□ 1.51
Hmga1-201ENSMUST00000114888 Pabpn1Q8CCS6 302 aaKnown RBP24.46■■□□□ 1.51
Hmga1-201ENSMUST00000114888 Pla2r1Q62028 1487 aa24.45■■□□□ 1.5
Hmga1-201ENSMUST00000114888 Zeb1Q64318 1117 aa24.39■■□□□ 1.5
Hmga1-201ENSMUST00000114888 Npm2Q80W85 207 aa24.36■■□□□ 1.49
Hmga1-201ENSMUST00000114888 Mroh2bQ7M6Y6 1581 aa24.35■■□□□ 1.49
Hmga1-201ENSMUST00000114888 Pelp1Q9DBD5 1123 aaKnown RBP24.34■■□□□ 1.49
Hmga1-201ENSMUST00000114888 Col17a1Q07563 1470 aa24.32■■□□□ 1.48
Hmga1-201ENSMUST00000114888 Fgd6Q69ZL1 1399 aa24.3■■□□□ 1.48
Hmga1-201ENSMUST00000114888 Rapgef2Q8CHG7 1496 aa24.27■■□□□ 1.48
Retrieved 100 of 22,080 RNA–protein pairs in 7.5 ms